RNA–Protein interactions for RNA: ENST00000470279.1

STRC-208, Transcript of stereocilin, humanhuman

TSL 4

Gene STRC, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-208ENST00000470279 TMEM126AQ9H061 195 aa7.91□□□□□ -1.14
STRC-208ENST00000470279 TMEM238C9JI98 176 aa7.9□□□□□ -1.14
STRC-208ENST00000470279 LINC00614P0C842 121 aa7.9□□□□□ -1.14
STRC-208ENST00000470279 C2orf66Q6UXQ4 117 aa7.9□□□□□ -1.14
STRC-208ENST00000470279 CXCL5P42830 114 aa7.89□□□□□ -1.15
STRC-208ENST00000470279 AMELXQ99217 191 aa7.89□□□□□ -1.15
STRC-208ENST00000470279 FLGP20930 4061 aaPredicted RBP7.89□□□□□ -1.15
STRC-208ENST00000470279 SPINK1P00995 79 aa7.88□□□□□ -1.15
STRC-208ENST00000470279 FAM19A3Q7Z5A8 133 aa7.88□□□□□ -1.15
STRC-208ENST00000470279 TOMM6Q96B49 74 aa7.88□□□□□ -1.15
STRC-208ENST00000470279 CHCHD1Q96BP2 118 aaKnown RBP7.88□□□□□ -1.15
STRC-208ENST00000470279 SPRR4Q96PI1 79 aa7.88□□□□□ -1.15
STRC-208ENST00000470279 CDKN2A-AS1Q9UH64 79 aa7.88□□□□□ -1.15
STRC-208ENST00000470279 NDUFA12Q9UI09 145 aa7.88□□□□□ -1.15
STRC-208ENST00000470279 M0R378 163 aa7.87□□□□□ -1.15
STRC-208ENST00000470279 PAPPA-AS1Q5QFB9 102 aa7.87□□□□□ -1.15
STRC-208ENST00000470279 URB1-AS1Q96HZ7 61 aa7.87□□□□□ -1.15
STRC-208ENST00000470279 TIMM17AQ99595 171 aa7.87□□□□□ -1.15
STRC-208ENST00000470279 ERASQ7Z444 233 aa7.86□□□□□ -1.15
STRC-208ENST00000470279 HIGD2AQ9BW72 106 aa7.86□□□□□ -1.15
STRC-208ENST00000470279 IGIPA6NJ69 53 aa7.85□□□□□ -1.15
STRC-208ENST00000470279 BAGE3Q86Y29 109 aa7.85□□□□□ -1.15
STRC-208ENST00000470279 VCX2Q9H322 139 aa7.85□□□□□ -1.15
STRC-208ENST00000470279 SSPOA2VEC9 5147 aa7.85□□□□□ -1.15
STRC-208ENST00000470279 M0R2T5 61 aa7.84□□□□□ -1.15
STRC-208ENST00000470279 HBDP02042 147 aa7.84□□□□□ -1.15
STRC-208ENST00000470279 HERVK_113P63121 156 aa7.84□□□□□ -1.15
STRC-208ENST00000470279 FAM19A2Q8N3H0 131 aa7.84□□□□□ -1.15
STRC-208ENST00000470279 SCGB3A1Q96QR1 104 aa7.84□□□□□ -1.15
STRC-208ENST00000470279 HSBP1O75506 76 aa7.83□□□□□ -1.16
STRC-208ENST00000470279 Q8N377 158 aa7.83□□□□□ -1.16
STRC-208ENST00000470279 IGLV8-61A0A075B6I0 122 aa7.82□□□□□ -1.16
STRC-208ENST00000470279 A0A096LNJ9 63 aa7.82□□□□□ -1.16
STRC-208ENST00000470279 SMIM1B2RUZ4 78 aa7.82□□□□□ -1.16
STRC-208ENST00000470279 HIST1H2BKO60814 126 aa7.82□□□□□ -1.16
STRC-208ENST00000470279 HIST1H2BJP06899 126 aa7.82□□□□□ -1.16
STRC-208ENST00000470279 VPREB1P12018 145 aa7.82□□□□□ -1.16
STRC-208ENST00000470279 HIST1H2BOP23527 126 aa7.82□□□□□ -1.16
STRC-208ENST00000470279 HIST1H2BBP33778 126 aa7.82□□□□□ -1.16
STRC-208ENST00000470279 HIST1H2BDP58876 126 aa7.82□□□□□ -1.16
STRC-208ENST00000470279 HIST1H2BCP62807 126 aa7.82□□□□□ -1.16
STRC-208ENST00000470279 HIST2H2BEQ16778 126 aa7.82□□□□□ -1.16
STRC-208ENST00000470279 PCOTHQ58A44 107 aa7.82□□□□□ -1.16
STRC-208ENST00000470279 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.82□□□□□ -1.16
STRC-208ENST00000470279 COX7B2Q8TF08 81 aa7.82□□□□□ -1.16
STRC-208ENST00000470279 HIST1H2BHQ93079 126 aa7.82□□□□□ -1.16
STRC-208ENST00000470279 HIST1H2BNQ99877 126 aa7.82□□□□□ -1.16
STRC-208ENST00000470279 HIST1H2BMQ99879 126 aa7.82□□□□□ -1.16
STRC-208ENST00000470279 ATP5LO75964 103 aa7.81□□□□□ -1.16
STRC-208ENST00000470279 SEC11AP67812 179 aa7.81□□□□□ -1.16
STRC-208ENST00000470279 PDZD11Q5EBL8 140 aa7.81□□□□□ -1.16
STRC-208ENST00000470279 GEMIN7Q9H840 131 aaKnown RBP7.81□□□□□ -1.16
STRC-208ENST00000470279 ZNF706Q9Y5V0 76 aaPredicted RBP7.81□□□□□ -1.16
STRC-208ENST00000470279 SERF1AO75920 110 aa7.8□□□□□ -1.16
STRC-208ENST00000470279 RPS29P62273 56 aaKnown RBP7.8□□□□□ -1.16
STRC-208ENST00000470279 USH2AO75445 5202 aa7.79□□□□□ -1.16
STRC-208ENST00000470279 PMVKQ15126 192 aa7.79□□□□□ -1.16
STRC-208ENST00000470279 PMCHL1Q16048 86 aa7.79□□□□□ -1.16
STRC-208ENST00000470279 SLC25A20O43772 301 aa7.78□□□□□ -1.16
STRC-208ENST00000470279 LINC00310P59036 64 aa7.78□□□□□ -1.16
STRC-208ENST00000470279 CST9LQ9H4G1 147 aa7.77□□□□□ -1.17
STRC-208ENST00000470279 COA6Q5JTJ3 125 aaKnown RBP7.76□□□□□ -1.17
STRC-208ENST00000470279 Q8NDZ9 215 aa7.76□□□□□ -1.17
STRC-208ENST00000470279 LEPROTL1O95214 131 aa7.75□□□□□ -1.17
STRC-208ENST00000470279 PFN2P35080 140 aa7.75□□□□□ -1.17
STRC-208ENST00000470279 IFI27L1Q96BM0 104 aa7.75□□□□□ -1.17
STRC-208ENST00000470279 HSPB8Q9UJY1 196 aa7.75□□□□□ -1.17
STRC-208ENST00000470279 TRAV12-1A0A0B4J245 112 aa7.74□□□□□ -1.17
STRC-208ENST00000470279 TINCRA0A1B0GVN0 87 aa7.74□□□□□ -1.17
STRC-208ENST00000470279 RPL24P83731 157 aaKnown RBP7.74□□□□□ -1.17
STRC-208ENST00000470279 SND1-IT1Q9HBX3 110 aa7.74□□□□□ -1.17
STRC-208ENST00000470279 FCGBPQ9Y6R7 5405 aaPredicted RBP7.74□□□□□ -1.17
STRC-208ENST00000470279 IGLV5-45A0A087WSX0 123 aa7.73□□□□□ -1.17
STRC-208ENST00000470279 SPINK8P0C7L1 97 aa7.73□□□□□ -1.17
STRC-208ENST00000470279 MOBPQ13875 183 aa7.73□□□□□ -1.17
STRC-208ENST00000470279 LINC00483Q53H64 154 aa7.73□□□□□ -1.17
STRC-208ENST00000470279 IGLC3P0DOY3 106 aa7.72□□□□□ -1.17
STRC-208ENST00000470279 NDUFA6P56556 154 aa7.72□□□□□ -1.17
STRC-208ENST00000470279 COX6B2Q6YFQ2 88 aa7.71□□□□□ -1.18
STRC-208ENST00000470279 IGLV9-49A0A0B4J1Y8 123 aa7.7□□□□□ -1.18
STRC-208ENST00000470279 SSBP3-AS1Q7Z2R9 100 aa7.7□□□□□ -1.18
STRC-208ENST00000470279 SMCR5Q8TEV8 140 aa7.7□□□□□ -1.18
STRC-208ENST00000470279 CHTOPQ9Y3Y2 248 aaKnown RBP7.7□□□□□ -1.18
STRC-208ENST00000470279 H3BRM9 83 aa7.69□□□□□ -1.18
STRC-208ENST00000470279 FABP4P15090 132 aa7.69□□□□□ -1.18
STRC-208ENST00000470279 MAP1LC3CQ9BXW4 147 aa7.69□□□□□ -1.18
STRC-208ENST00000470279 S100A6P06703 90 aa7.68□□□□□ -1.18
STRC-208ENST00000470279 GAGE2AQ6NT46 116 aa7.68□□□□□ -1.18
STRC-208ENST00000470279 ERG28Q9UKR5 140 aa7.68□□□□□ -1.18
STRC-208ENST00000470279 C9orf92A6NGG3 77 aa7.66□□□□□ -1.18
STRC-208ENST00000470279 ZNF22P17026 224 aaPredicted RBP7.66□□□□□ -1.18
STRC-208ENST00000470279 PLNP26678 52 aa7.66□□□□□ -1.18
STRC-208ENST00000470279 C11orf86A6NJI1 115 aa7.65□□□□□ -1.18
STRC-208ENST00000470279 PRYO14603 147 aa7.65□□□□□ -1.18
STRC-208ENST00000470279 KRTAP4-16G5E9R7 235 aaPredicted RBP7.64□□□□□ -1.19
STRC-208ENST00000470279 H0Y8G0 127 aa7.64□□□□□ -1.19
STRC-208ENST00000470279 SYS1-DBNDD2H3BUS1 97 aa7.64□□□□□ -1.19
STRC-208ENST00000470279 S100A2P29034 98 aa7.64□□□□□ -1.19
STRC-208ENST00000470279 SPRR1AP35321 89 aa7.64□□□□□ -1.19
STRC-208ENST00000470279 COX17Q14061 63 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms