RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 ERHP84090 104 aaKnown RBP0.79□□□□□ -2.28
ITGA6-209ENST00000470259 HSD17B12Q53GQ0 312 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 RPL39P5Q59GN2 51 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 C10orf55Q5SWW7 151 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 TMEM244Q5VVB8 128 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 LCN15Q6UWW0 184 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 IDO2Q6ZQW0 420 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 C7orf65Q6ZTY9 151 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 CLECL1Q8IZS7 167 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 C1orf54Q8WWF1 131 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 MAGOHBQ96A72 148 aaKnown RBP0.79□□□□□ -2.28
ITGA6-209ENST00000470259 Q96M85 177 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 PRELID3AQ96N28 172 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 TP53RKQ96S44 253 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 SLC50A1Q9BRV3 221 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 C2orf88Q9BSF0 95 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 ZNF471Q9BX82 626 aaPredicted RBP0.79□□□□□ -2.28
ITGA6-209ENST00000470259 ERG28Q9UKR5 140 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 TMEM30CPA0ZSE6 113 aa0.78□□□□□ -2.28
ITGA6-209ENST00000470259 MIF4GDA9UHW6 222 aaKnown RBP0.78□□□□□ -2.28
ITGA6-209ENST00000470259 FNDC10F2Z333 226 aa0.78□□□□□ -2.28
ITGA6-209ENST00000470259 F8W036 122 aa0.78□□□□□ -2.28
ITGA6-209ENST00000470259 H3BMG7 143 aa0.78□□□□□ -2.28
ITGA6-209ENST00000470259 TCRAP04437 139 aa0.78□□□□□ -2.28
ITGA6-209ENST00000470259 TSPAN19P0C672 248 aa0.78□□□□□ -2.28
ITGA6-209ENST00000470259 METTL15P1P0C7V9 234 aa0.78□□□□□ -2.28
ITGA6-209ENST00000470259 AQP4P55087 323 aa0.78□□□□□ -2.28
ITGA6-209ENST00000470259 RPS25P62851 125 aaKnown RBP0.78□□□□□ -2.28
ITGA6-209ENST00000470259 ZNF90Q03938 601 aa0.78□□□□□ -2.28
ITGA6-209ENST00000470259 TMEM14EPQ6UXP3 125 aa0.78□□□□□ -2.28
ITGA6-209ENST00000470259 PATE2Q6UY27 113 aa0.78□□□□□ -2.28
ITGA6-209ENST00000470259 CTAGE3PQ8IX95 158 aa0.78□□□□□ -2.28
ITGA6-209ENST00000470259 CHCHD1Q96BP2 118 aaKnown RBP0.78□□□□□ -2.28
ITGA6-209ENST00000470259 CYSTM1Q9H1C7 97 aa0.78□□□□□ -2.28
ITGA6-209ENST00000470259 TAF9BQ9HBM6 251 aa0.78□□□□□ -2.28
ITGA6-209ENST00000470259 NIT2Q9NQR4 276 aa0.78□□□□□ -2.28
ITGA6-209ENST00000470259 NHP2Q9NX24 153 aaKnown RBP0.78□□□□□ -2.28
ITGA6-209ENST00000470259 TAS2R4Q9NYW5 299 aa0.78□□□□□ -2.28
ITGA6-209ENST00000470259 TRAV27A0A087WT01 109 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 TMSB15BA0A087X1C1 80 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 TRBV27A0A0K0K1C4 114 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 FAM236AA0A1B0GUQ0 79 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 FAM236BA0A1B0GV22 79 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 A6NIN4 97 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 A8MWV9 139 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 ZNF670-ZNF695F2Z2N8 137 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 M0R129 80 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 LYRM1O43325 122 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 HBDP02042 147 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 PMP2P02689 132 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 SLC25A5P05141 298 aaKnown RBP0.77□□□□□ -2.29
ITGA6-209ENST00000470259 GPX1P07203 203 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 CD14P08571 375 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 IGLC6P0CF74 106 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 LINC00694P0DN24 101 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 TPT1P13693 172 aaKnown RBP0.77□□□□□ -2.29
ITGA6-209ENST00000470259 FABP4P15090 132 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 ZNF25P17030 456 aaPredicted RBP0.77□□□□□ -2.29
ITGA6-209ENST00000470259 S100PP25815 95 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 FOXA3P55318 350 aaPredicted RBP0.77□□□□□ -2.29
ITGA6-209ENST00000470259 RPL38P63173 70 aaKnown RBP0.77□□□□□ -2.29
ITGA6-209ENST00000470259 EMX2Q04743 252 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 ZNF345Q14585 488 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 RNASE10Q5GAN6 216 aaKnown RBP0.77□□□□□ -2.29
ITGA6-209ENST00000470259 SPANXN5Q5MJ07 72 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 Q6ZQT0 140 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 OR5D14Q8NGL3 314 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 CLEC2BQ92478 149 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 C12orf57Q99622 126 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 TCEAL7Q9BRU2 100 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 GGACTQ9BVM4 153 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 RPRMQ9NS64 109 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 NDUFB11Q9NX14 153 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 COMMD3Q9UBI1 195 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 GNG8Q9UK08 70 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 TPRKBQ9Y3C4 175 aa0.77□□□□□ -2.29
ITGA6-209ENST00000470259 hDV103S1A0JD37 113 aa0.76□□□□□ -2.29
ITGA6-209ENST00000470259 BBIP1A8MTZ0 92 aa0.76□□□□□ -2.29
ITGA6-209ENST00000470259 TMEM262E9PQX1 116 aa0.76□□□□□ -2.29
ITGA6-209ENST00000470259 C17orf112F2Z3M2 114 aa0.76□□□□□ -2.29
ITGA6-209ENST00000470259 UQCRQO14949 82 aa0.76□□□□□ -2.29
ITGA6-209ENST00000470259 NCR2O95944 276 aa0.76□□□□□ -2.29
ITGA6-209ENST00000470259 SPINK1P00995 79 aa0.76□□□□□ -2.29
ITGA6-209ENST00000470259 IFNGP01579 166 aa0.76□□□□□ -2.29
ITGA6-209ENST00000470259 SFTA3P0C7M3 94 aa0.76□□□□□ -2.29
ITGA6-209ENST00000470259 SAA1P0DJI8 122 aaPredicted RBP0.76□□□□□ -2.29
ITGA6-209ENST00000470259 AKR1D1P51857 326 aa0.76□□□□□ -2.29
ITGA6-209ENST00000470259 RPL37P61927 97 aaKnown RBP0.76□□□□□ -2.29
ITGA6-209ENST00000470259 LSM3P62310 102 aaKnown RBP0.76□□□□□ -2.29
ITGA6-209ENST00000470259 SELENOWP63302 87 aa0.76□□□□□ -2.29
ITGA6-209ENST00000470259 MRPS36P82909 103 aaKnown RBP0.76□□□□□ -2.29
ITGA6-209ENST00000470259 QRFPP83859 136 aa0.76□□□□□ -2.29
ITGA6-209ENST00000470259 C9orf116Q5BN46 136 aaPredicted RBP0.76□□□□□ -2.29
ITGA6-209ENST00000470259 CLLU1Q5K131 121 aa0.76□□□□□ -2.29
ITGA6-209ENST00000470259 GLIPR1L1Q6UWM5 242 aa0.76□□□□□ -2.29
ITGA6-209ENST00000470259 OR10AC1Q8NH08 325 aa0.76□□□□□ -2.29
ITGA6-209ENST00000470259 OR5AK2Q8NH90 309 aa0.76□□□□□ -2.29
ITGA6-209ENST00000470259 TMEM254Q8TBM7 123 aa0.76□□□□□ -2.29
ITGA6-209ENST00000470259 ZNF625Q96I27 306 aaPredicted RBP0.76□□□□□ -2.29
ITGA6-209ENST00000470259 NAA38Q9BRA0 125 aaKnown RBP0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms