RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 LAMA4Q16363 1823 aa1.87□□□□□ -2.11
COL11A1-208ENST00000470170 CREBBPQ92793 2442 aa1.87□□□□□ -2.11
COL11A1-208ENST00000470170 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.87□□□□□ -2.11
COL11A1-208ENST00000470170 A0A087WTM6 91 aa1.87□□□□□ -2.11
COL11A1-208ENST00000470170 A0A087WVE0 104 aa1.87□□□□□ -2.11
COL11A1-208ENST00000470170 NDUFB1O75438 58 aa1.87□□□□□ -2.11
COL11A1-208ENST00000470170 COL5A3P25940 1745 aaPredicted RBP1.87□□□□□ -2.11
COL11A1-208ENST00000470170 CAV3P56539 151 aa1.87□□□□□ -2.11
COL11A1-208ENST00000470170 FDCSPQ8NFU4 85 aa1.87□□□□□ -2.11
COL11A1-208ENST00000470170 SPRR4Q96PI1 79 aa1.87□□□□□ -2.11
COL11A1-208ENST00000470170 BAZ2BQ9UIF8 2168 aaKnown RBP1.87□□□□□ -2.11
COL11A1-208ENST00000470170 REV3LO60673 3130 aa1.87□□□□□ -2.11
COL11A1-208ENST00000470170 ARFGEF2Q9Y6D5 1785 aa1.87□□□□□ -2.11
COL11A1-208ENST00000470170 PIK3C2BO00750 1634 aa1.87□□□□□ -2.11
COL11A1-208ENST00000470170 HELZ2Q9BYK8 2649 aaKnown RBP1.87□□□□□ -2.11
COL11A1-208ENST00000470170 CR1P17927 2039 aa1.86□□□□□ -2.11
COL11A1-208ENST00000470170 ZFYVE26Q68DK2 2539 aa1.86□□□□□ -2.11
COL11A1-208ENST00000470170 NAV3Q8IVL0 2385 aa1.86□□□□□ -2.11
COL11A1-208ENST00000470170 TRGV2A0A075B6R0 118 aa1.86□□□□□ -2.11
COL11A1-208ENST00000470170 TRAV1-2A0A0B4J238 106 aa1.86□□□□□ -2.11
COL11A1-208ENST00000470170 PI4KAP42356 2102 aa1.86□□□□□ -2.11
COL11A1-208ENST00000470170 Q6ZQY7 126 aa1.86□□□□□ -2.11
COL11A1-208ENST00000470170 C5orf42Q9H799 3197 aa1.86□□□□□ -2.11
COL11A1-208ENST00000470170 ARFGEF1Q9Y6D6 1849 aa1.86□□□□□ -2.11
COL11A1-208ENST00000470170 MED12Q93074 2177 aa1.86□□□□□ -2.11
COL11A1-208ENST00000470170 SSC5DA1L4H1 1573 aa1.85□□□□□ -2.11
COL11A1-208ENST00000470170 TRGV1A0A0A0MS02 117 aa1.85□□□□□ -2.11
COL11A1-208ENST00000470170 TRBV7-4A0A0J9YYF1 115 aa1.85□□□□□ -2.11
COL11A1-208ENST00000470170 Q6ZRN7 208 aaPredicted RBP1.85□□□□□ -2.11
COL11A1-208ENST00000470170 DEFB107AQ8IZN7 70 aa1.85□□□□□ -2.11
COL11A1-208ENST00000470170 DOCK11Q5JSL3 2073 aa1.85□□□□□ -2.11
COL11A1-208ENST00000470170 TIAM2Q8IVF5 1701 aa1.85□□□□□ -2.11
COL11A1-208ENST00000470170 ESPL1Q14674 2120 aa1.84□□□□□ -2.11
COL11A1-208ENST00000470170 DNAH12Q6ZR08 3092 aa1.84□□□□□ -2.11
COL11A1-208ENST00000470170 CEP250Q9BV73 2442 aa1.84□□□□□ -2.11
COL11A1-208ENST00000470170 H0Y9P7 68 aa1.84□□□□□ -2.11
COL11A1-208ENST00000470170 ACYP2P14621 99 aa1.84□□□□□ -2.11
COL11A1-208ENST00000470170 TMEM263Q8WUH6 116 aaKnown RBP1.84□□□□□ -2.11
COL11A1-208ENST00000470170 Q96NJ1 140 aa1.84□□□□□ -2.11
COL11A1-208ENST00000470170 FAM103A1Q9BTL3 118 aaKnown RBP1.84□□□□□ -2.11
COL11A1-208ENST00000470170 BPTFQ12830 3046 aa1.84□□□□□ -2.12
COL11A1-208ENST00000470170 CDC42BPGQ6DT37 1551 aa1.84□□□□□ -2.12
COL11A1-208ENST00000470170 PCNX1Q96RV3 2341 aa1.84□□□□□ -2.12
COL11A1-208ENST00000470170 KIF1AQ12756 1690 aa1.83□□□□□ -2.12
COL11A1-208ENST00000470170 SPAG17Q6Q759 2223 aa1.83□□□□□ -2.12
COL11A1-208ENST00000470170 ITSN1Q15811 1721 aa1.83□□□□□ -2.12
COL11A1-208ENST00000470170 FXYD6-FXYD2A0A087WZ82 144 aa1.83□□□□□ -2.12
COL11A1-208ENST00000470170 SNRPGP15A8MWD9 76 aa1.83□□□□□ -2.12
COL11A1-208ENST00000470170 HMGA1P17096 107 aaKnown RBP1.83□□□□□ -2.12
COL11A1-208ENST00000470170 SPATA8Q6RVD6 105 aa1.83□□□□□ -2.12
COL11A1-208ENST00000470170 CCL19Q99731 98 aa1.83□□□□□ -2.12
COL11A1-208ENST00000470170 PLAC8Q9NZF1 115 aa1.83□□□□□ -2.12
COL11A1-208ENST00000470170 GVINP1Q7Z2Y8 2422 aa1.83□□□□□ -2.12
COL11A1-208ENST00000470170 UNC13CQ8NB66 2214 aa1.83□□□□□ -2.12
COL11A1-208ENST00000470170 SETD2Q9BYW2 2564 aaPredicted RBP1.83□□□□□ -2.12
COL11A1-208ENST00000470170 NHSQ6T4R5 1651 aa1.83□□□□□ -2.12
COL11A1-208ENST00000470170 J3QRE1 110 aa1.82□□□□□ -2.12
COL11A1-208ENST00000470170 HCRTO43612 131 aa1.82□□□□□ -2.12
COL11A1-208ENST00000470170 CACNA1HO95180 2353 aa1.82□□□□□ -2.12
COL11A1-208ENST00000470170 LMO7Q8WWI1 1683 aa1.82□□□□□ -2.12
COL11A1-208ENST00000470170 XRN1Q8IZH2 1706 aaKnown RBP1.82□□□□□ -2.12
COL11A1-208ENST00000470170 SPTBP11277 2137 aa1.82□□□□□ -2.12
COL11A1-208ENST00000470170 LOC285556D6RIA3 1793 aa1.82□□□□□ -2.12
COL11A1-208ENST00000470170 ARFGEF3Q5TH69 2177 aa1.82□□□□□ -2.12
COL11A1-208ENST00000470170 ALPK2Q86TB3 2170 aa1.82□□□□□ -2.12
COL11A1-208ENST00000470170 POLQO75417 2590 aa1.82□□□□□ -2.12
COL11A1-208ENST00000470170 TNRC6BQ9UPQ9 1833 aaKnown RBP1.82□□□□□ -2.12
COL11A1-208ENST00000470170 ANKRD50Q9ULJ7 1429 aa1.82□□□□□ -2.12
COL11A1-208ENST00000470170 CD163L1Q9NR16 1453 aa1.82□□□□□ -2.12
COL11A1-208ENST00000470170 SCN7AQ01118 1682 aa1.81□□□□□ -2.12
COL11A1-208ENST00000470170 PIEZO2Q9H5I5 2752 aa1.81□□□□□ -2.12
COL11A1-208ENST00000470170 S100A3P33764 101 aa1.81□□□□□ -2.12
COL11A1-208ENST00000470170 C10orf113Q5VZT2 155 aa1.81□□□□□ -2.12
COL11A1-208ENST00000470170 C10orf99Q6UWK7 81 aa1.81□□□□□ -2.12
COL11A1-208ENST00000470170 FXYD6Q9H0Q3 95 aa1.81□□□□□ -2.12
COL11A1-208ENST00000470170 USP34Q70CQ2 3546 aa1.81□□□□□ -2.12
COL11A1-208ENST00000470170 PRUNE2Q8WUY3 3088 aa1.81□□□□□ -2.12
COL11A1-208ENST00000470170 CFAP46Q8IYW2 2715 aa1.81□□□□□ -2.12
COL11A1-208ENST00000470170 SPTBN2O15020 2390 aa1.8□□□□□ -2.12
COL11A1-208ENST00000470170 PCDH15Q96QU1 1955 aa1.8□□□□□ -2.12
COL11A1-208ENST00000470170 IFI6P09912 130 aa1.8□□□□□ -2.12
COL11A1-208ENST00000470170 DCHS1Q96JQ0 3298 aa1.8□□□□□ -2.12
COL11A1-208ENST00000470170 SPG11Q96JI7 2443 aa1.8□□□□□ -2.12
COL11A1-208ENST00000470170 EIF2AK4Q9P2K8 1649 aaKnown RBP1.8□□□□□ -2.12
COL11A1-208ENST00000470170 ALS2Q96Q42 1657 aa1.8□□□□□ -2.12
COL11A1-208ENST00000470170 CRYBG1Q9Y4K1 1723 aa1.8□□□□□ -2.12
COL11A1-208ENST00000470170 SIPA1L3O60292 1781 aaPredicted RBP1.8□□□□□ -2.12
COL11A1-208ENST00000470170 MAP2P11137 1827 aaKnown RBP1.8□□□□□ -2.12
COL11A1-208ENST00000470170 BRWD1Q9NSI6 2320 aa1.79□□□□□ -2.12
COL11A1-208ENST00000470170 KALRNO60229 2985 aa1.79□□□□□ -2.12
COL11A1-208ENST00000470170 UNQ6190/PRO20217Q6UXQ8 127 aa1.79□□□□□ -2.12
COL11A1-208ENST00000470170 LINC00472Q9H8W2 130 aa1.79□□□□□ -2.12
COL11A1-208ENST00000470170 ABCC6O95255 1503 aa1.79□□□□□ -2.12
COL11A1-208ENST00000470170 TJP1Q07157 1748 aa1.79□□□□□ -2.12
COL11A1-208ENST00000470170 FN1P02751 2386 aaKnown RBP1.79□□□□□ -2.12
COL11A1-208ENST00000470170 FBN2P35556 2912 aa1.78□□□□□ -2.12
COL11A1-208ENST00000470170 TEX15Q9BXT5 2789 aa1.78□□□□□ -2.12
COL11A1-208ENST00000470170 LRRK2Q5S007 2527 aa1.78□□□□□ -2.12
COL11A1-208ENST00000470170 EP300Q09472 2414 aaPredicted RBP1.78□□□□□ -2.12
COL11A1-208ENST00000470170 TRAV21A0A0B4J279 112 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms