RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 X6R8D5 127 aa10.56□□□□□ -0.72
LIMS2-213ENST00000469300 C9orf116Q5BN46 136 aaPredicted RBP10.55□□□□□ -0.72
LIMS2-213ENST00000469300 NTM-AS1Q6ZSK4 140 aa10.55□□□□□ -0.72
LIMS2-213ENST00000469300 HECTD1Q9ULT8 2610 aa10.55□□□□□ -0.72
LIMS2-213ENST00000469300 REG3GQ6UW15 175 aa10.55□□□□□ -0.72
LIMS2-213ENST00000469300 A0A096LNT2 108 aa10.55□□□□□ -0.72
LIMS2-213ENST00000469300 C3orf84H3BNL1 204 aa10.55□□□□□ -0.72
LIMS2-213ENST00000469300 LINC01546A6NGU7 62 aa10.54□□□□□ -0.72
LIMS2-213ENST00000469300 TSPEAR-AS2P59090 65 aa10.54□□□□□ -0.72
LIMS2-213ENST00000469300 PRYO14603 147 aa10.54□□□□□ -0.72
LIMS2-213ENST00000469300 FREM2Q5SZK8 3169 aa10.53□□□□□ -0.72
LIMS2-213ENST00000469300 Q8N9L7 120 aa10.52□□□□□ -0.72
LIMS2-213ENST00000469300 TRBV7-6A0A0J9YX20 115 aa10.51□□□□□ -0.73
LIMS2-213ENST00000469300 DSPP15924 2871 aaKnown RBP10.51□□□□□ -0.73
LIMS2-213ENST00000469300 C10orf25Q5T742 122 aa10.51□□□□□ -0.73
LIMS2-213ENST00000469300 IGHV3OR16-9A0A0B4J2B5 98 aa10.51□□□□□ -0.73
LIMS2-213ENST00000469300 CASC2Q6XLA1 102 aa10.51□□□□□ -0.73
LIMS2-213ENST00000469300 Q8N3U1 123 aa10.51□□□□□ -0.73
LIMS2-213ENST00000469300 IGLV5-39A0A0G2JS06 123 aa10.5□□□□□ -0.73
LIMS2-213ENST00000469300 SPEGQ15772 3267 aa10.5□□□□□ -0.73
LIMS2-213ENST00000469300 Q8N814 137 aa10.5□□□□□ -0.73
LIMS2-213ENST00000469300 ESRGQ1W209 222 aa10.5□□□□□ -0.73
LIMS2-213ENST00000469300 SBSPONQ8IVN8 264 aa10.49□□□□□ -0.73
LIMS2-213ENST00000469300 USP24Q9UPU5 2620 aa10.49□□□□□ -0.73
LIMS2-213ENST00000469300 PSPHP1O15172 72 aa10.49□□□□□ -0.73
LIMS2-213ENST00000469300 WFDC13Q8IUB5 93 aa10.49□□□□□ -0.73
LIMS2-213ENST00000469300 ADAMTSL4-AS1Q5T5F5 129 aa10.49□□□□□ -0.73
LIMS2-213ENST00000469300 Q6ZRU5 148 aa10.48□□□□□ -0.73
LIMS2-213ENST00000469300 MDFIQ99750 246 aa10.48□□□□□ -0.73
LIMS2-213ENST00000469300 MUC4Q99102 2169 aa10.48□□□□□ -0.73
LIMS2-213ENST00000469300 IGLV9-49A0A0B4J1Y8 123 aa10.48□□□□□ -0.73
LIMS2-213ENST00000469300 TMEM254Q8TBM7 123 aa10.48□□□□□ -0.73
LIMS2-213ENST00000469300 FAM30AQ9NZY2 134 aa10.47□□□□□ -0.73
LIMS2-213ENST00000469300 PRO0461Q9UI25 63 aa10.47□□□□□ -0.73
LIMS2-213ENST00000469300 C4orf26Q17RF5 130 aa10.47□□□□□ -0.73
LIMS2-213ENST00000469300 SPINK6Q6UWN8 80 aa10.47□□□□□ -0.73
LIMS2-213ENST00000469300 Q8NAQ8 132 aa10.47□□□□□ -0.73
LIMS2-213ENST00000469300 NBEAQ8NFP9 2946 aa10.46□□□□□ -0.74
LIMS2-213ENST00000469300 SMCPP49901 116 aaPredicted RBP10.46□□□□□ -0.74
LIMS2-213ENST00000469300 LINC00846Q9NV44 126 aa10.45□□□□□ -0.74
LIMS2-213ENST00000469300 C1orf137Q5JT78 98 aa10.44□□□□□ -0.74
LIMS2-213ENST00000469300 A8MTW9 85 aa10.44□□□□□ -0.74
LIMS2-213ENST00000469300 IGLV5-45A0A087WSX0 123 aa10.43□□□□□ -0.74
LIMS2-213ENST00000469300 PRR3P79522 188 aaKnown RBP10.43□□□□□ -0.74
LIMS2-213ENST00000469300 FRYQ5TBA9 3013 aa10.42□□□□□ -0.74
LIMS2-213ENST00000469300 LINC00208Q96KT6 92 aa10.42□□□□□ -0.74
LIMS2-213ENST00000469300 ZNF292O60281 2723 aa10.42□□□□□ -0.74
LIMS2-213ENST00000469300 A0A087WYN8 130 aa10.4□□□□□ -0.74
LIMS2-213ENST00000469300 BCE1O60756 84 aa10.4□□□□□ -0.75
LIMS2-213ENST00000469300 FRYLO94915 3013 aa10.39□□□□□ -0.75
LIMS2-213ENST00000469300 Q9UF83 564 aa10.38□□□□□ -0.75
LIMS2-213ENST00000469300 LINC00575Q6W349 94 aa10.38□□□□□ -0.75
LIMS2-213ENST00000469300 C22orf24Q9Y442 160 aa10.38□□□□□ -0.75
LIMS2-213ENST00000469300 Q9BRP9 147 aa10.37□□□□□ -0.75
LIMS2-213ENST00000469300 WWC2-AS2Q96NR7 200 aa10.36□□□□□ -0.75
LIMS2-213ENST00000469300 Q6ZVQ6 151 aa10.36□□□□□ -0.75
LIMS2-213ENST00000469300 HELZ2Q9BYK8 2649 aaKnown RBP10.36□□□□□ -0.75
LIMS2-213ENST00000469300 NBDYA0A0U1RRE5 68 aa10.35□□□□□ -0.75
LIMS2-213ENST00000469300 LIMD2Q9BT23 127 aa10.35□□□□□ -0.75
LIMS2-213ENST00000469300 LINC00337Q8N6G1 96 aa10.35□□□□□ -0.75
LIMS2-213ENST00000469300 CIRBP-AS1Q8TBR5 109 aa10.34□□□□□ -0.75
LIMS2-213ENST00000469300 LINC01547P58512 204 aaPredicted RBP10.34□□□□□ -0.75
LIMS2-213ENST00000469300 KRTAP1-3Q8IUG1 177 aa10.33□□□□□ -0.76
LIMS2-213ENST00000469300 CXCL6P80162 114 aa10.33□□□□□ -0.76
LIMS2-213ENST00000469300 CSNK1G2-AS1Q8NCQ2 148 aa10.33□□□□□ -0.76
LIMS2-213ENST00000469300 C6orf48Q9UBA6 75 aa10.32□□□□□ -0.76
LIMS2-213ENST00000469300 LINC00588Q9Y4M8 146 aa10.32□□□□□ -0.76
LIMS2-213ENST00000469300 EYSQ5T1H1 3165 aa10.32□□□□□ -0.76
LIMS2-213ENST00000469300 C19orf73Q9NVV2 129 aa10.32□□□□□ -0.76
LIMS2-213ENST00000469300 COL6A3P12111 3177 aa10.31□□□□□ -0.76
LIMS2-213ENST00000469300 AKAP13Q12802 2813 aa10.31□□□□□ -0.76
LIMS2-213ENST00000469300 DNAH10OSP0CZ25 163 aa10.31□□□□□ -0.76
LIMS2-213ENST00000469300 MGAM2Q2M2H8 2515 aa10.31□□□□□ -0.76
LIMS2-213ENST00000469300 VPREB1P12018 145 aa10.31□□□□□ -0.76
LIMS2-213ENST00000469300 SPATA3Q8NHX4 192 aa10.31□□□□□ -0.76
LIMS2-213ENST00000469300 BOD1L1Q8NFC6 3051 aa10.3□□□□□ -0.76
LIMS2-213ENST00000469300 SMCR5Q8TEV8 140 aa10.3□□□□□ -0.76
LIMS2-213ENST00000469300 FLNAP21333 2647 aaKnown RBP10.29□□□□□ -0.76
LIMS2-213ENST00000469300 hDV103S1A0JD37 113 aa10.29□□□□□ -0.76
LIMS2-213ENST00000469300 SERTAD4-AS1Q5TG53 156 aa10.28□□□□□ -0.76
LIMS2-213ENST00000469300 ATRQ13535 2644 aa10.28□□□□□ -0.76
LIMS2-213ENST00000469300 CFAP46Q8IYW2 2715 aa10.27□□□□□ -0.76
LIMS2-213ENST00000469300 GVQW2A0A096LPI5 108 aaPredicted RBP10.27□□□□□ -0.76
LIMS2-213ENST00000469300 PRLHP81277 87 aa10.27□□□□□ -0.76
LIMS2-213ENST00000469300 LINC00167Q96N53 147 aa10.27□□□□□ -0.76
LIMS2-213ENST00000469300 K7EIL1 84 aa10.27□□□□□ -0.77
LIMS2-213ENST00000469300 KRTAP1-1Q07627 177 aa10.26□□□□□ -0.77
LIMS2-213ENST00000469300 A0A087WSZ3 146 aa10.26□□□□□ -0.77
LIMS2-213ENST00000469300 ITPR3Q14573 2671 aa10.24□□□□□ -0.77
LIMS2-213ENST00000469300 C16orf90A8MZG2 172 aa10.23□□□□□ -0.77
LIMS2-213ENST00000469300 KRTAP10-11P60412 298 aa10.23□□□□□ -0.77
LIMS2-213ENST00000469300 A0A1B0GW54 56 aa10.22□□□□□ -0.77
LIMS2-213ENST00000469300 KRTAP10-3P60369 221 aa10.22□□□□□ -0.77
LIMS2-213ENST00000469300 LINC00612Q8N6U2 182 aa10.22□□□□□ -0.77
LIMS2-213ENST00000469300 RTL8CO15255 209 aa10.21□□□□□ -0.77
LIMS2-213ENST00000469300 H0Y9P7 68 aa10.21□□□□□ -0.77
LIMS2-213ENST00000469300 MAST4O15021 2626 aa10.19□□□□□ -0.78
LIMS2-213ENST00000469300 IGHV6-1A0A0B4J1U7 121 aa10.19□□□□□ -0.78
LIMS2-213ENST00000469300 GIG44P09565 113 aaPredicted RBP10.19□□□□□ -0.78
LIMS2-213ENST00000469300 CHD6Q8TD26 2715 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms