RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 LINC00526Q96FQ7 95 aa9.68□□□□□ -0.86
SMARCD3-205ENST00000469154 IGLV10-54A0A075B6I4 117 aa9.68□□□□□ -0.86
SMARCD3-205ENST00000469154 PRR3P79522 188 aaKnown RBP9.68□□□□□ -0.86
SMARCD3-205ENST00000469154 DEFB135Q30KP9 77 aa9.68□□□□□ -0.86
SMARCD3-205ENST00000469154 MUC7Q8TAX7 377 aa9.68□□□□□ -0.86
SMARCD3-205ENST00000469154 TMEM256-PLSCR3K7ERE1 68 aa9.67□□□□□ -0.86
SMARCD3-205ENST00000469154 NBEAL1Q6ZS30 2694 aa9.67□□□□□ -0.86
SMARCD3-205ENST00000469154 COX7CP15954 63 aa9.67□□□□□ -0.86
SMARCD3-205ENST00000469154 EGFEM1PQ0D2K5 195 aa9.67□□□□□ -0.86
SMARCD3-205ENST00000469154 IGKV3D-7A0A0C4DH55 119 aa9.66□□□□□ -0.86
SMARCD3-205ENST00000469154 S100A7L2Q5SY68 101 aa9.66□□□□□ -0.86
SMARCD3-205ENST00000469154 DEFB4AO15263 64 aa9.66□□□□□ -0.86
SMARCD3-205ENST00000469154 Q8N3U1 123 aa9.66□□□□□ -0.86
SMARCD3-205ENST00000469154 RPL18AQ02543 176 aaKnown RBP9.65□□□□□ -0.86
SMARCD3-205ENST00000469154 C9orf116Q5BN46 136 aaPredicted RBP9.65□□□□□ -0.86
SMARCD3-205ENST00000469154 SPAG11BQ08648 103 aa9.64□□□□□ -0.87
SMARCD3-205ENST00000469154 SMIM20Q8N5G0 67 aa9.64□□□□□ -0.87
SMARCD3-205ENST00000469154 MIFP14174 115 aa9.64□□□□□ -0.87
SMARCD3-205ENST00000469154 C6orf99Q4VX62 202 aa9.64□□□□□ -0.87
SMARCD3-205ENST00000469154 C2orf48Q96LS8 159 aa9.64□□□□□ -0.87
SMARCD3-205ENST00000469154 LELP1Q5T871 98 aa9.63□□□□□ -0.87
SMARCD3-205ENST00000469154 IGHV4-30-4P0DP06 118 aa9.63□□□□□ -0.87
SMARCD3-205ENST00000469154 NBEAL2Q6ZNJ1 2754 aa9.62□□□□□ -0.87
SMARCD3-205ENST00000469154 ATP5EP2Q5VTU8 51 aa9.62□□□□□ -0.87
SMARCD3-205ENST00000469154 Q8NAQ8 132 aa9.62□□□□□ -0.87
SMARCD3-205ENST00000469154 CELA1Q9UNI1 258 aa9.62□□□□□ -0.87
SMARCD3-205ENST00000469154 LINC00575Q6W349 94 aa9.62□□□□□ -0.87
SMARCD3-205ENST00000469154 Q8NDZ9 215 aa9.62□□□□□ -0.87
SMARCD3-205ENST00000469154 A0A0J9YWU9 116 aa9.61□□□□□ -0.87
SMARCD3-205ENST00000469154 PRB2P02812 416 aaPredicted RBP9.61□□□□□ -0.87
SMARCD3-205ENST00000469154 SPART-AS1P0CW21 52 aa9.61□□□□□ -0.87
SMARCD3-205ENST00000469154 CRYGAP11844 174 aa9.61□□□□□ -0.87
SMARCD3-205ENST00000469154 UNQ6190/PRO20217Q6UXQ8 127 aa9.61□□□□□ -0.87
SMARCD3-205ENST00000469154 C10orf25Q5T742 122 aa9.6□□□□□ -0.87
SMARCD3-205ENST00000469154 C6orf223Q8N319 242 aa9.6□□□□□ -0.87
SMARCD3-205ENST00000469154 KRTAP21-3Q3LHN1 58 aa9.59□□□□□ -0.87
SMARCD3-205ENST00000469154 PRR34Q9NV39 138 aa9.59□□□□□ -0.87
SMARCD3-205ENST00000469154 A0A087WVE0 104 aa9.58□□□□□ -0.88
SMARCD3-205ENST00000469154 hADV29S1A0JD25 119 aa9.58□□□□□ -0.88
SMARCD3-205ENST00000469154 HTN3P15516 51 aa9.58□□□□□ -0.88
SMARCD3-205ENST00000469154 C5orf47Q569G3 176 aa9.58□□□□□ -0.88
SMARCD3-205ENST00000469154 GVQW2A0A096LPI5 108 aaPredicted RBP9.57□□□□□ -0.88
SMARCD3-205ENST00000469154 ZNF561-AS1K7EIQ3 104 aa9.57□□□□□ -0.88
SMARCD3-205ENST00000469154 IGLV6-57P01721 117 aa9.57□□□□□ -0.88
SMARCD3-205ENST00000469154 SERP2Q8N6R1 65 aa9.57□□□□□ -0.88
SMARCD3-205ENST00000469154 DNAH3Q8TD57 4116 aa9.57□□□□□ -0.88
SMARCD3-205ENST00000469154 DNHD1Q96M86 4753 aa9.57□□□□□ -0.88
SMARCD3-205ENST00000469154 USP17L23D6RBM5 183 aa9.57□□□□□ -0.88
SMARCD3-205ENST00000469154 KLK12Q9UKR0 248 aa9.57□□□□□ -0.88
SMARCD3-205ENST00000469154 F8WDY8 70 aa9.56□□□□□ -0.88
SMARCD3-205ENST00000469154 H3BQ85 93 aa9.56□□□□□ -0.88
SMARCD3-205ENST00000469154 LYPD5Q6UWN5 251 aa9.56□□□□□ -0.88
SMARCD3-205ENST00000469154 UBL5Q9BZL1 73 aa9.55□□□□□ -0.88
SMARCD3-205ENST00000469154 LOC110117498A0A087WWA1 95 aa9.55□□□□□ -0.88
SMARCD3-205ENST00000469154 RBM3P98179 157 aaKnown RBP9.54□□□□□ -0.88
SMARCD3-205ENST00000469154 KPRPQ5T749 579 aaPredicted RBP9.54□□□□□ -0.88
SMARCD3-205ENST00000469154 ENHOQ6UWT2 76 aa9.54□□□□□ -0.88
SMARCD3-205ENST00000469154 TRBV10-3A0A0K0K1G6 114 aa9.54□□□□□ -0.88
SMARCD3-205ENST00000469154 Q6ZQT0 140 aa9.54□□□□□ -0.88
SMARCD3-205ENST00000469154 LAMTOR3Q9UHA4 124 aa9.53□□□□□ -0.88
SMARCD3-205ENST00000469154 K7EIL1 84 aa9.52□□□□□ -0.89
SMARCD3-205ENST00000469154 C6orf48Q9UBA6 75 aa9.52□□□□□ -0.89
SMARCD3-205ENST00000469154 TRAV23DV6A0A075B6W5 121 aa9.51□□□□□ -0.89
SMARCD3-205ENST00000469154 DIRC1Q969H9 104 aa9.51□□□□□ -0.89
SMARCD3-205ENST00000469154 UPK3BQ9BT76 320 aa9.51□□□□□ -0.89
SMARCD3-205ENST00000469154 PDE6GP18545 87 aa9.5□□□□□ -0.89
SMARCD3-205ENST00000469154 Q6ZQY7 126 aa9.5□□□□□ -0.89
SMARCD3-205ENST00000469154 DSCR8Q96T75 97 aa9.48□□□□□ -0.89
SMARCD3-205ENST00000469154 RETNQ9HD89 108 aa9.48□□□□□ -0.89
SMARCD3-205ENST00000469154 J3KT08 172 aa9.47□□□□□ -0.89
SMARCD3-205ENST00000469154 GHRHP01286 108 aa9.47□□□□□ -0.89
SMARCD3-205ENST00000469154 TMEM258P61165 79 aa9.47□□□□□ -0.89
SMARCD3-205ENST00000469154 FAM19A1Q7Z5A9 133 aa9.47□□□□□ -0.89
SMARCD3-205ENST00000469154 MRAPQ8TCY5 172 aa9.47□□□□□ -0.89
SMARCD3-205ENST00000469154 XAGE1AQ9HD64 81 aa9.47□□□□□ -0.89
SMARCD3-205ENST00000469154 TRBV7-6A0A0J9YX20 115 aa9.47□□□□□ -0.89
SMARCD3-205ENST00000469154 COX7BP24311 80 aa9.47□□□□□ -0.89
SMARCD3-205ENST00000469154 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.47□□□□□ -0.89
SMARCD3-205ENST00000469154 H3BNG1 76 aa9.46□□□□□ -0.89
SMARCD3-205ENST00000469154 ZNF73O43830 326 aaPredicted RBP9.46□□□□□ -0.89
SMARCD3-205ENST00000469154 CAMK2N2Q96S95 79 aa9.46□□□□□ -0.9
SMARCD3-205ENST00000469154 CYSTM1Q9H1C7 97 aa9.45□□□□□ -0.9
SMARCD3-205ENST00000469154 ELOF1P60002 83 aaKnown RBP9.45□□□□□ -0.9
SMARCD3-205ENST00000469154 TENM3Q9P273 2699 aa9.44□□□□□ -0.9
SMARCD3-205ENST00000469154 VPREB1P12018 145 aa9.44□□□□□ -0.9
SMARCD3-205ENST00000469154 HIGD2BQ4VC39 106 aa9.44□□□□□ -0.9
SMARCD3-205ENST00000469154 WFDC10BQ8IUB3 73 aa9.44□□□□□ -0.9
SMARCD3-205ENST00000469154 BCE1O60756 84 aa9.43□□□□□ -0.9
SMARCD3-205ENST00000469154 RPS28P62857 69 aaKnown RBP9.43□□□□□ -0.9
SMARCD3-205ENST00000469154 M0R378 163 aa9.43□□□□□ -0.9
SMARCD3-205ENST00000469154 KRTAP26-1Q6PEX3 210 aa9.43□□□□□ -0.9
SMARCD3-205ENST00000469154 Q6ZVQ6 151 aa9.43□□□□□ -0.9
SMARCD3-205ENST00000469154 M0R2N4 97 aa9.42□□□□□ -0.9
SMARCD3-205ENST00000469154 LINC01547P58512 204 aaPredicted RBP9.42□□□□□ -0.9
SMARCD3-205ENST00000469154 TRBV7-4A0A0J9YYF1 115 aa9.41□□□□□ -0.9
SMARCD3-205ENST00000469154 CXCL6P80162 114 aa9.4□□□□□ -0.9
SMARCD3-205ENST00000469154 Q6ZRU5 148 aa9.4□□□□□ -0.9
SMARCD3-205ENST00000469154 NDUFC2-KCTD14E9PQ53 114 aa9.4□□□□□ -0.91
SMARCD3-205ENST00000469154 HAMPP81172 84 aa9.4□□□□□ -0.91
SMARCD3-205ENST00000469154 C15orf56Q8N910 161 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms