RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 PLEKHB2Q96CS7 222 aa8.59□□□□□ -1.03
SDCCAG3-209ENST00000468963 SFTA2Q6UW10 78 aa8.58□□□□□ -1.04
SDCCAG3-209ENST00000468963 LINC00304Q8N9R0 145 aa8.58□□□□□ -1.04
SDCCAG3-209ENST00000468963 IGKV2D-26A0A0A0MRZ7 120 aa8.56□□□□□ -1.04
SDCCAG3-209ENST00000468963 CTAG1AP78358 180 aa8.56□□□□□ -1.04
SDCCAG3-209ENST00000468963 CHTOPQ9Y3Y2 248 aaKnown RBP8.56□□□□□ -1.04
SDCCAG3-209ENST00000468963 TMEM223A0PJW6 202 aa8.55□□□□□ -1.04
SDCCAG3-209ENST00000468963 LINC00158P58513 81 aa8.55□□□□□ -1.04
SDCCAG3-209ENST00000468963 RETNLBQ9BQ08 111 aa8.55□□□□□ -1.04
SDCCAG3-209ENST00000468963 APOC3P02656 99 aa8.54□□□□□ -1.04
SDCCAG3-209ENST00000468963 CBLN2Q8IUK8 224 aa8.54□□□□□ -1.04
SDCCAG3-209ENST00000468963 TRAV12-1A0A0B4J245 112 aa8.53□□□□□ -1.04
SDCCAG3-209ENST00000468963 C3orf22Q8N5N4 141 aa8.53□□□□□ -1.04
SDCCAG3-209ENST00000468963 YPEL4Q96NS1 127 aa8.53□□□□□ -1.04
SDCCAG3-209ENST00000468963 A0A0U1RRA0 63 aa8.52□□□□□ -1.05
SDCCAG3-209ENST00000468963 IFI27L1Q96BM0 104 aa8.52□□□□□ -1.05
SDCCAG3-209ENST00000468963 CHCHD1Q96BP2 118 aaKnown RBP8.52□□□□□ -1.05
SDCCAG3-209ENST00000468963 SNAPINO95295 136 aa8.51□□□□□ -1.05
SDCCAG3-209ENST00000468963 SVBPQ8N300 66 aa8.51□□□□□ -1.05
SDCCAG3-209ENST00000468963 SMIM13P0DJ93 91 aa8.5□□□□□ -1.05
SDCCAG3-209ENST00000468963 SPRR4Q96PI1 79 aa8.5□□□□□ -1.05
SDCCAG3-209ENST00000468963 HIGD2AQ9BW72 106 aa8.5□□□□□ -1.05
SDCCAG3-209ENST00000468963 IGLV7-46A0A075B6I9 117 aa8.49□□□□□ -1.05
SDCCAG3-209ENST00000468963 A0A0U1RQV1 116 aa8.49□□□□□ -1.05
SDCCAG3-209ENST00000468963 TPRXLQ17RH7 258 aa8.49□□□□□ -1.05
SDCCAG3-209ENST00000468963 SPRR1AP35321 89 aa8.48□□□□□ -1.05
SDCCAG3-209ENST00000468963 NDUFA5Q16718 116 aa8.47□□□□□ -1.05
SDCCAG3-209ENST00000468963 SPAG11AQ6PDA7 123 aa8.47□□□□□ -1.05
SDCCAG3-209ENST00000468963 BOD1L2Q8IYS8 172 aa8.47□□□□□ -1.05
SDCCAG3-209ENST00000468963 MIR7-3HGQ8N6C7 128 aa8.47□□□□□ -1.05
SDCCAG3-209ENST00000468963 KCNQ1DNQ9H478 68 aa8.47□□□□□ -1.05
SDCCAG3-209ENST00000468963 KRTAP4-16G5E9R7 235 aaPredicted RBP8.46□□□□□ -1.06
SDCCAG3-209ENST00000468963 PRYO14603 147 aa8.46□□□□□ -1.06
SDCCAG3-209ENST00000468963 ATP6V1G1O75348 118 aa8.46□□□□□ -1.06
SDCCAG3-209ENST00000468963 HERV-K104P63124 156 aa8.46□□□□□ -1.06
SDCCAG3-209ENST00000468963 LINC00337Q8N6G1 96 aa8.46□□□□□ -1.06
SDCCAG3-209ENST00000468963 CDIP1Q9H305 208 aa8.46□□□□□ -1.06
SDCCAG3-209ENST00000468963 LCE2AQ5TA79 106 aaPredicted RBP8.45□□□□□ -1.06
SDCCAG3-209ENST00000468963 FAM19A2Q8N3H0 131 aa8.45□□□□□ -1.06
SDCCAG3-209ENST00000468963 SMCR5Q8TEV8 140 aa8.45□□□□□ -1.06
SDCCAG3-209ENST00000468963 LINC00587B1AMM8 73 aa8.44□□□□□ -1.06
SDCCAG3-209ENST00000468963 MEIG1Q5JSS6 88 aa8.44□□□□□ -1.06
SDCCAG3-209ENST00000468963 PPDPFQ9H3Y8 114 aa8.44□□□□□ -1.06
SDCCAG3-209ENST00000468963 NDUFA12Q9UI09 145 aa8.44□□□□□ -1.06
SDCCAG3-209ENST00000468963 NCR3O14931 201 aa8.43□□□□□ -1.06
SDCCAG3-209ENST00000468963 ZNF706Q9Y5V0 76 aaPredicted RBP8.43□□□□□ -1.06
SDCCAG3-209ENST00000468963 LOC107984156A0A0G2JMH3 177 aa8.42□□□□□ -1.06
SDCCAG3-209ENST00000468963 TRBV10-3A0A0K0K1G6 114 aa8.42□□□□□ -1.06
SDCCAG3-209ENST00000468963 MYMXA0A1B0GTQ4 84 aa8.42□□□□□ -1.06
SDCCAG3-209ENST00000468963 HSBP1O75506 76 aa8.42□□□□□ -1.06
SDCCAG3-209ENST00000468963 ARL17AQ8IVW1 177 aa8.42□□□□□ -1.06
SDCCAG3-209ENST00000468963 ETDCA0A1B0GVM5 59 aa8.4□□□□□ -1.06
SDCCAG3-209ENST00000468963 LINC00310P59036 64 aa8.4□□□□□ -1.06
SDCCAG3-209ENST00000468963 TSPEAR-AS2P59090 65 aa8.4□□□□□ -1.06
SDCCAG3-209ENST00000468963 LINC00483Q53H64 154 aa8.4□□□□□ -1.06
SDCCAG3-209ENST00000468963 C4orf48Q5BLP8 95 aa8.4□□□□□ -1.06
SDCCAG3-209ENST00000468963 DAND5Q8N907 189 aa8.4□□□□□ -1.06
SDCCAG3-209ENST00000468963 Q8NBF4 154 aa8.4□□□□□ -1.06
SDCCAG3-209ENST00000468963 MAP1LC3CQ9BXW4 147 aa8.4□□□□□ -1.06
SDCCAG3-209ENST00000468963 B5MCH6 92 aa8.39□□□□□ -1.07
SDCCAG3-209ENST00000468963 LEPROTO15243 131 aa8.39□□□□□ -1.07
SDCCAG3-209ENST00000468963 FP248Q71RG6 208 aaPredicted RBP8.39□□□□□ -1.07
SDCCAG3-209ENST00000468963 LEPROTL1O95214 131 aa8.38□□□□□ -1.07
SDCCAG3-209ENST00000468963 TRGC2P03986 189 aa8.38□□□□□ -1.07
SDCCAG3-209ENST00000468963 TRBV10-2A0A0K0K1G8 114 aa8.37□□□□□ -1.07
SDCCAG3-209ENST00000468963 H0Y8G0 127 aa8.37□□□□□ -1.07
SDCCAG3-209ENST00000468963 ERC2-IT1O76042 136 aa8.37□□□□□ -1.07
SDCCAG3-209ENST00000468963 SERF1AO75920 110 aa8.36□□□□□ -1.07
SDCCAG3-209ENST00000468963 SPINK1P00995 79 aa8.36□□□□□ -1.07
SDCCAG3-209ENST00000468963 J3QQQ9 107 aa8.35□□□□□ -1.07
SDCCAG3-209ENST00000468963 PLNP26678 52 aa8.35□□□□□ -1.07
SDCCAG3-209ENST00000468963 DDTP30046 118 aa8.35□□□□□ -1.07
SDCCAG3-209ENST00000468963 KRTAP13-3Q3SY46 172 aa8.35□□□□□ -1.07
SDCCAG3-209ENST00000468963 GAGE2AQ6NT46 116 aa8.35□□□□□ -1.07
SDCCAG3-209ENST00000468963 KRTAP9-2Q9BYQ4 174 aa8.35□□□□□ -1.07
SDCCAG3-209ENST00000468963 S100A12P80511 92 aa8.34□□□□□ -1.07
SDCCAG3-209ENST00000468963 SSBP3-AS1Q7Z2R9 100 aa8.34□□□□□ -1.07
SDCCAG3-209ENST00000468963 Q9BRP9 147 aa8.34□□□□□ -1.07
SDCCAG3-209ENST00000468963 DPM2O94777 84 aa8.33□□□□□ -1.08
SDCCAG3-209ENST00000468963 NMUP48645 174 aa8.33□□□□□ -1.08
SDCCAG3-209ENST00000468963 NDUFC2O95298 119 aa8.32□□□□□ -1.08
SDCCAG3-209ENST00000468963 IGLV6-57P01721 117 aa8.32□□□□□ -1.08
SDCCAG3-209ENST00000468963 FABP4P15090 132 aa8.32□□□□□ -1.08
SDCCAG3-209ENST00000468963 PMCHL2Q9BQD1 86 aa8.32□□□□□ -1.08
SDCCAG3-209ENST00000468963 SPANXB1Q9NS25 103 aaPredicted RBP8.32□□□□□ -1.08
SDCCAG3-209ENST00000468963 HSPB8Q9UJY1 196 aa8.32□□□□□ -1.08
SDCCAG3-209ENST00000468963 IGKCP01834 107 aa8.31□□□□□ -1.08
SDCCAG3-209ENST00000468963 HERVK_113P61574 105 aa8.31□□□□□ -1.08
SDCCAG3-209ENST00000468963 Q6ZRX8 168 aa8.31□□□□□ -1.08
SDCCAG3-209ENST00000468963 EIF4EBP3O60516 100 aaPredicted RBP8.3□□□□□ -1.08
SDCCAG3-209ENST00000468963 MOBPQ13875 183 aa8.3□□□□□ -1.08
SDCCAG3-209ENST00000468963 SOSTDC1Q6X4U4 206 aa8.3□□□□□ -1.08
SDCCAG3-209ENST00000468963 IGLV9-49A0A0B4J1Y8 123 aa8.29□□□□□ -1.08
SDCCAG3-209ENST00000468963 COLCA2A8K830 154 aa8.29□□□□□ -1.08
SDCCAG3-209ENST00000468963 LGALS3P17931 250 aaKnown RBP8.29□□□□□ -1.08
SDCCAG3-209ENST00000468963 RPS29P62273 56 aaKnown RBP8.29□□□□□ -1.08
SDCCAG3-209ENST00000468963 ASB16-AS1Q495Z4 193 aa8.29□□□□□ -1.08
SDCCAG3-209ENST00000468963 ADAMTSL4-AS1Q5T5F5 129 aa8.29□□□□□ -1.08
SDCCAG3-209ENST00000468963 Q8N377 158 aa8.29□□□□□ -1.08
SDCCAG3-209ENST00000468963 S100A7L2Q5SY68 101 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 212.4 ms