RNA–Protein interactions for RNA: ENST00000468704.1

TMEM50A-202, Transcript of transmembrane protein 50A, humanhuman

TSL 3

Gene TMEM50A, Length 799 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-202ENST00000468704 HIST1H2BCP62807 126 aa10.3□□□□□ -0.76
TMEM50A-202ENST00000468704 HIST2H2BEQ16778 126 aa10.3□□□□□ -0.76
TMEM50A-202ENST00000468704 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.3□□□□□ -0.76
TMEM50A-202ENST00000468704 HIST1H2BHQ93079 126 aa10.3□□□□□ -0.76
TMEM50A-202ENST00000468704 HIST1H2BNQ99877 126 aa10.3□□□□□ -0.76
TMEM50A-202ENST00000468704 HIST1H2BMQ99879 126 aa10.3□□□□□ -0.76
TMEM50A-202ENST00000468704 VPREB1P12018 145 aa10.29□□□□□ -0.76
TMEM50A-202ENST00000468704 FAM19A2Q8N3H0 131 aa10.29□□□□□ -0.76
TMEM50A-202ENST00000468704 RPL24P83731 157 aaKnown RBP10.28□□□□□ -0.76
TMEM50A-202ENST00000468704 LRP2P98164 4655 aa10.28□□□□□ -0.76
TMEM50A-202ENST00000468704 IGKV2-28A0A075B6P5 120 aa10.27□□□□□ -0.77
TMEM50A-202ENST00000468704 IGKV2D-28P01615 120 aa10.27□□□□□ -0.77
TMEM50A-202ENST00000468704 SERF1AO75920 110 aa10.26□□□□□ -0.77
TMEM50A-202ENST00000468704 UBE2AP49459 152 aa10.26□□□□□ -0.77
TMEM50A-202ENST00000468704 LINC00158P58513 81 aa10.25□□□□□ -0.77
TMEM50A-202ENST00000468704 H0Y8G0 127 aa10.24□□□□□ -0.77
TMEM50A-202ENST00000468704 LEPROTL1O95214 131 aa10.24□□□□□ -0.77
TMEM50A-202ENST00000468704 LINC00310P59036 64 aa10.24□□□□□ -0.77
TMEM50A-202ENST00000468704 KRTAP13-1Q8IUC0 172 aa10.24□□□□□ -0.77
TMEM50A-202ENST00000468704 HERV-K104P63124 156 aa10.22□□□□□ -0.77
TMEM50A-202ENST00000468704 Q8NDZ9 215 aa10.22□□□□□ -0.77
TMEM50A-202ENST00000468704 A0A0U1RRA0 63 aa10.21□□□□□ -0.77
TMEM50A-202ENST00000468704 MEIG1Q5JSS6 88 aa10.21□□□□□ -0.77
TMEM50A-202ENST00000468704 COA6Q5JTJ3 125 aaKnown RBP10.21□□□□□ -0.77
TMEM50A-202ENST00000468704 TMEM126AQ9H061 195 aa10.21□□□□□ -0.77
TMEM50A-202ENST00000468704 HSPB8Q9UJY1 196 aa10.21□□□□□ -0.77
TMEM50A-202ENST00000468704 TMEM238C9JI98 176 aa10.2□□□□□ -0.78
TMEM50A-202ENST00000468704 PLNP26678 52 aa10.2□□□□□ -0.78
TMEM50A-202ENST00000468704 PRLHP81277 87 aa10.2□□□□□ -0.78
TMEM50A-202ENST00000468704 NDUFA12Q9UI09 145 aa10.2□□□□□ -0.78
TMEM50A-202ENST00000468704 A0A087X002 238 aa10.19□□□□□ -0.78
TMEM50A-202ENST00000468704 SMIM13P0DJ93 91 aa10.19□□□□□ -0.78
TMEM50A-202ENST00000468704 CRYGAP11844 174 aa10.19□□□□□ -0.78
TMEM50A-202ENST00000468704 FAM19A1Q7Z5A9 133 aa10.19□□□□□ -0.78
TMEM50A-202ENST00000468704 MYMXA0A1B0GTQ4 84 aa10.18□□□□□ -0.78
TMEM50A-202ENST00000468704 LINC00587B1AMM8 73 aa10.18□□□□□ -0.78
TMEM50A-202ENST00000468704 M0R378 163 aa10.17□□□□□ -0.78
TMEM50A-202ENST00000468704 S100A6P06703 90 aa10.17□□□□□ -0.78
TMEM50A-202ENST00000468704 FABP4P15090 132 aa10.17□□□□□ -0.78
TMEM50A-202ENST00000468704 DPM2O94777 84 aa10.16□□□□□ -0.78
TMEM50A-202ENST00000468704 HERVK_113P61574 105 aa10.16□□□□□ -0.78
TMEM50A-202ENST00000468704 MIR7-3HGQ8N6C7 128 aa10.16□□□□□ -0.78
TMEM50A-202ENST00000468704 TYMSOSQ8TAI1 123 aa10.16□□□□□ -0.78
TMEM50A-202ENST00000468704 PLEKHB2Q96CS7 222 aa10.16□□□□□ -0.78
TMEM50A-202ENST00000468704 MAP1LC3CQ9BXW4 147 aa10.16□□□□□ -0.78
TMEM50A-202ENST00000468704 LEPROTO15243 131 aa10.15□□□□□ -0.78
TMEM50A-202ENST00000468704 TSPEAR-AS2P59090 65 aa10.15□□□□□ -0.78
TMEM50A-202ENST00000468704 FAM229BQ4G0N7 80 aa10.15□□□□□ -0.78
TMEM50A-202ENST00000468704 BOD1L2Q8IYS8 172 aa10.15□□□□□ -0.78
TMEM50A-202ENST00000468704 IGKCP01834 107 aa10.13□□□□□ -0.79
TMEM50A-202ENST00000468704 ANAPC11Q9NYG5 84 aa10.13□□□□□ -0.79
TMEM50A-202ENST00000468704 IGKV2D-26A0A0A0MRZ7 120 aa10.12□□□□□ -0.79
TMEM50A-202ENST00000468704 J3QQQ9 107 aa10.12□□□□□ -0.79
TMEM50A-202ENST00000468704 PRYO14603 147 aa10.12□□□□□ -0.79
TMEM50A-202ENST00000468704 NCR3O14931 201 aa10.12□□□□□ -0.79
TMEM50A-202ENST00000468704 PMCHL2Q9BQD1 86 aa10.12□□□□□ -0.79
TMEM50A-202ENST00000468704 NMUP48645 174 aa10.11□□□□□ -0.79
TMEM50A-202ENST00000468704 TMA7Q9Y2S6 64 aaKnown RBP10.11□□□□□ -0.79
TMEM50A-202ENST00000468704 LGALS3P17931 250 aaKnown RBP10.1□□□□□ -0.79
TMEM50A-202ENST00000468704 SNRPEP62304 92 aaKnown RBP10.1□□□□□ -0.79
TMEM50A-202ENST00000468704 PRR4Q16378 134 aa10.1□□□□□ -0.79
TMEM50A-202ENST00000468704 KRTAP13-2Q52LG2 175 aa10.1□□□□□ -0.79
TMEM50A-202ENST00000468704 HIST3H2BBQ8N257 126 aa10.1□□□□□ -0.79
TMEM50A-202ENST00000468704 HIGD2AQ9BW72 106 aa10.1□□□□□ -0.79
TMEM50A-202ENST00000468704 TSPAN13O95857 204 aa10.09□□□□□ -0.79
TMEM50A-202ENST00000468704 S100A2P29034 98 aa10.09□□□□□ -0.79
TMEM50A-202ENST00000468704 C5orf52A6NGY3 159 aa10.08□□□□□ -0.8
TMEM50A-202ENST00000468704 DAND5Q8N907 189 aa10.07□□□□□ -0.8
TMEM50A-202ENST00000468704 LPAP08519 4548 aa10.07□□□□□ -0.8
TMEM50A-202ENST00000468704 LOC107984156A0A0G2JMH3 177 aa10.06□□□□□ -0.8
TMEM50A-202ENST00000468704 TRBV10-3A0A0K0K1G6 114 aa10.06□□□□□ -0.8
TMEM50A-202ENST00000468704 SPRR1AP35321 89 aa10.06□□□□□ -0.8
TMEM50A-202ENST00000468704 S100A12P80511 92 aa10.06□□□□□ -0.8
TMEM50A-202ENST00000468704 ARL17AQ8IVW1 177 aa10.06□□□□□ -0.8
TMEM50A-202ENST00000468704 LINC00337Q8N6G1 96 aa10.06□□□□□ -0.8
TMEM50A-202ENST00000468704 MIEN1Q9BRT3 115 aa10.06□□□□□ -0.8
TMEM50A-202ENST00000468704 KCNQ1DNQ9H478 68 aa10.06□□□□□ -0.8
TMEM50A-202ENST00000468704 ETDCA0A1B0GVM5 59 aa10.05□□□□□ -0.8
TMEM50A-202ENST00000468704 LINC00304Q8N9R0 145 aa10.05□□□□□ -0.8
TMEM50A-202ENST00000468704 HIST1H2BLQ99880 126 aa10.05□□□□□ -0.8
TMEM50A-202ENST00000468704 ZNF706Q9Y5V0 76 aaPredicted RBP10.05□□□□□ -0.8
TMEM50A-202ENST00000468704 TRBV10-2A0A0K0K1G8 114 aa10.04□□□□□ -0.8
TMEM50A-202ENST00000468704 E9PLD3 99 aa10.04□□□□□ -0.8
TMEM50A-202ENST00000468704 SYS1-DBNDD2H3BUS1 97 aa10.04□□□□□ -0.8
TMEM50A-202ENST00000468704 RNF213Q63HN8 5207 aa10.03□□□□□ -0.8
TMEM50A-202ENST00000468704 SPRR4Q96PI1 79 aa10.03□□□□□ -0.8
TMEM50A-202ENST00000468704 SPANXB1Q9NS25 103 aaPredicted RBP10.03□□□□□ -0.8
TMEM50A-202ENST00000468704 KRTAP4-16G5E9R7 235 aaPredicted RBP10.02□□□□□ -0.81
TMEM50A-202ENST00000468704 C3orf79P0CE67 100 aa10.02□□□□□ -0.81
TMEM50A-202ENST00000468704 KRTDAPP60985 99 aa10.02□□□□□ -0.81
TMEM50A-202ENST00000468704 DDTP30046 118 aa10.01□□□□□ -0.81
TMEM50A-202ENST00000468704 PET117Q6UWS5 81 aa10.01□□□□□ -0.81
TMEM50A-202ENST00000468704 A0A0J9YXY3 114 aa10□□□□□ -0.81
TMEM50A-202ENST00000468704 NDUFC2O95298 119 aa10□□□□□ -0.81
TMEM50A-202ENST00000468704 LINC01545Q5VT33 79 aa10□□□□□ -0.81
TMEM50A-202ENST00000468704 C3orf22Q8N5N4 141 aa9.99□□□□□ -0.81
TMEM50A-202ENST00000468704 CTAG1AP78358 180 aa9.98□□□□□ -0.81
TMEM50A-202ENST00000468704 C20orf202A1L168 122 aa9.97□□□□□ -0.81
TMEM50A-202ENST00000468704 S100A7L2Q5SY68 101 aa9.97□□□□□ -0.81
TMEM50A-202ENST00000468704 SMCR5Q8TEV8 140 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms