RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 C9orf153Q5TBE3 101 aa10.02□□□□□ -0.8
PRPF38B-204ENST00000467302 FBN1P35555 2871 aaKnown RBP10.02□□□□□ -0.81
PRPF38B-204ENST00000467302 COX7CP15954 63 aa10.02□□□□□ -0.81
PRPF38B-204ENST00000467302 REG3AQ06141 175 aa10.02□□□□□ -0.81
PRPF38B-204ENST00000467302 IGLV10-54A0A075B6I4 117 aa10.01□□□□□ -0.81
PRPF38B-204ENST00000467302 IGKV3D-7A0A0C4DH55 119 aa10.01□□□□□ -0.81
PRPF38B-204ENST00000467302 ATOX1O00244 68 aa10.01□□□□□ -0.81
PRPF38B-204ENST00000467302 ANGP03950 147 aaKnown RBP10.01□□□□□ -0.81
PRPF38B-204ENST00000467302 C9orf116Q5BN46 136 aaPredicted RBP10.01□□□□□ -0.81
PRPF38B-204ENST00000467302 Q8NDZ9 215 aa10.01□□□□□ -0.81
PRPF38B-204ENST00000467302 JMJD7-PLA2G4BH0Y9G9 81 aa10□□□□□ -0.81
PRPF38B-204ENST00000467302 TMEM256-PLSCR3K7ERE1 68 aa10□□□□□ -0.81
PRPF38B-204ENST00000467302 RPL18AQ02543 176 aaKnown RBP9.99□□□□□ -0.81
PRPF38B-204ENST00000467302 DNAH3Q8TD57 4116 aa9.98□□□□□ -0.81
PRPF38B-204ENST00000467302 HTN3P15516 51 aa9.98□□□□□ -0.81
PRPF38B-204ENST00000467302 CRYGAP11844 174 aa9.97□□□□□ -0.81
PRPF38B-204ENST00000467302 C6orf99Q4VX62 202 aa9.97□□□□□ -0.81
PRPF38B-204ENST00000467302 STAB1Q9NY15 2570 aa9.96□□□□□ -0.81
PRPF38B-204ENST00000467302 A0A087WVE0 104 aa9.95□□□□□ -0.82
PRPF38B-204ENST00000467302 C10orf25Q5T742 122 aa9.95□□□□□ -0.82
PRPF38B-204ENST00000467302 LINC00575Q6W349 94 aa9.95□□□□□ -0.82
PRPF38B-204ENST00000467302 MUC7Q8TAX7 377 aa9.95□□□□□ -0.82
PRPF38B-204ENST00000467302 UNQ6190/PRO20217Q6UXQ8 127 aa9.95□□□□□ -0.82
PRPF38B-204ENST00000467302 RETNQ9HD89 108 aa9.95□□□□□ -0.82
PRPF38B-204ENST00000467302 A0A0J9YWU9 116 aa9.94□□□□□ -0.82
PRPF38B-204ENST00000467302 C6orf223Q8N319 242 aa9.94□□□□□ -0.82
PRPF38B-204ENST00000467302 MAST4O15021 2626 aa9.94□□□□□ -0.82
PRPF38B-204ENST00000467302 SPAG11BQ08648 103 aa9.94□□□□□ -0.82
PRPF38B-204ENST00000467302 S100A7L2Q5SY68 101 aa9.93□□□□□ -0.82
PRPF38B-204ENST00000467302 LELP1Q5T871 98 aa9.93□□□□□ -0.82
PRPF38B-204ENST00000467302 LYPD5Q6UWN5 251 aa9.93□□□□□ -0.82
PRPF38B-204ENST00000467302 PRR34Q9NV39 138 aa9.92□□□□□ -0.82
PRPF38B-204ENST00000467302 IGLV6-57P01721 117 aa9.92□□□□□ -0.82
PRPF38B-204ENST00000467302 ATP5EP2Q5VTU8 51 aa9.92□□□□□ -0.82
PRPF38B-204ENST00000467302 USP17L23D6RBM5 183 aa9.91□□□□□ -0.82
PRPF38B-204ENST00000467302 SERP2Q8N6R1 65 aa9.91□□□□□ -0.82
PRPF38B-204ENST00000467302 ANK2Q01484 3957 aa9.91□□□□□ -0.82
PRPF38B-204ENST00000467302 PKD1L1Q8TDX9 2849 aa9.9□□□□□ -0.82
PRPF38B-204ENST00000467302 hADV29S1A0JD25 119 aa9.9□□□□□ -0.82
PRPF38B-204ENST00000467302 GVQW2A0A096LPI5 108 aaPredicted RBP9.89□□□□□ -0.83
PRPF38B-204ENST00000467302 UPK3BQ9BT76 320 aa9.89□□□□□ -0.83
PRPF38B-204ENST00000467302 CYSTM1Q9H1C7 97 aa9.89□□□□□ -0.83
PRPF38B-204ENST00000467302 ENHOQ6UWT2 76 aa9.89□□□□□ -0.83
PRPF38B-204ENST00000467302 H3BNG1 76 aa9.88□□□□□ -0.83
PRPF38B-204ENST00000467302 Q6ZQT0 140 aa9.88□□□□□ -0.83
PRPF38B-204ENST00000467302 KLK12Q9UKR0 248 aa9.88□□□□□ -0.83
PRPF38B-204ENST00000467302 LOC110117498A0A087WWA1 95 aa9.87□□□□□ -0.83
PRPF38B-204ENST00000467302 ZNF561-AS1K7EIQ3 104 aa9.87□□□□□ -0.83
PRPF38B-204ENST00000467302 RBM3P98179 157 aaKnown RBP9.87□□□□□ -0.83
PRPF38B-204ENST00000467302 TRBV10-3A0A0K0K1G6 114 aa9.86□□□□□ -0.83
PRPF38B-204ENST00000467302 UBL5Q9BZL1 73 aa9.86□□□□□ -0.83
PRPF38B-204ENST00000467302 Q6ZTC4 211 aa9.85□□□□□ -0.83
PRPF38B-204ENST00000467302 COL6A5A8TX70 2615 aa9.85□□□□□ -0.83
PRPF38B-204ENST00000467302 C6orf48Q9UBA6 75 aa9.85□□□□□ -0.83
PRPF38B-204ENST00000467302 KPRPQ5T749 579 aaPredicted RBP9.84□□□□□ -0.83
PRPF38B-204ENST00000467302 FAM19A1Q7Z5A9 133 aa9.84□□□□□ -0.83
PRPF38B-204ENST00000467302 Q6ZQY7 126 aa9.82□□□□□ -0.84
PRPF38B-204ENST00000467302 LAMTOR3Q9UHA4 124 aa9.82□□□□□ -0.84
PRPF38B-204ENST00000467302 H3BQ85 93 aa9.82□□□□□ -0.84
PRPF38B-204ENST00000467302 TRAV23DV6A0A075B6W5 121 aa9.81□□□□□ -0.84
PRPF38B-204ENST00000467302 M0R2N4 97 aa9.81□□□□□ -0.84
PRPF38B-204ENST00000467302 C11orf45Q8TAV5 145 aa9.81□□□□□ -0.84
PRPF38B-204ENST00000467302 XAGE1AQ9HD64 81 aa9.8□□□□□ -0.84
PRPF38B-204ENST00000467302 GHRHP01286 108 aa9.8□□□□□ -0.84
PRPF38B-204ENST00000467302 PRB2P02812 416 aaPredicted RBP9.8□□□□□ -0.84
PRPF38B-204ENST00000467302 TMEM258P61165 79 aa9.8□□□□□ -0.84
PRPF38B-204ENST00000467302 RPS28P62857 69 aaKnown RBP9.8□□□□□ -0.84
PRPF38B-204ENST00000467302 DIRC1Q969H9 104 aa9.8□□□□□ -0.84
PRPF38B-204ENST00000467302 LOC107984640A0A0U1RRK4 108 aa9.79□□□□□ -0.84
PRPF38B-204ENST00000467302 J3KT08 172 aa9.79□□□□□ -0.84
PRPF38B-204ENST00000467302 DEFB131BA0A096LNP1 70 aa9.78□□□□□ -0.84
PRPF38B-204ENST00000467302 K7EIL1 84 aa9.78□□□□□ -0.84
PRPF38B-204ENST00000467302 PDE6GP18545 87 aa9.78□□□□□ -0.84
PRPF38B-204ENST00000467302 DSCR8Q96T75 97 aa9.78□□□□□ -0.84
PRPF38B-204ENST00000467302 TM2D3Q9BRN9 247 aa9.78□□□□□ -0.84
PRPF38B-204ENST00000467302 ZNF73O43830 326 aaPredicted RBP9.78□□□□□ -0.84
PRPF38B-204ENST00000467302 KRTAP26-1Q6PEX3 210 aa9.78□□□□□ -0.84
PRPF38B-204ENST00000467302 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.77□□□□□ -0.85
PRPF38B-204ENST00000467302 TRBV7-6A0A0J9YX20 115 aa9.77□□□□□ -0.85
PRPF38B-204ENST00000467302 LINC01547P58512 204 aaPredicted RBP9.77□□□□□ -0.85
PRPF38B-204ENST00000467302 ELOF1P60002 83 aaKnown RBP9.77□□□□□ -0.85
PRPF38B-204ENST00000467302 NOTCH1P46531 2555 aa9.76□□□□□ -0.85
PRPF38B-204ENST00000467302 VPREB1P12018 145 aa9.76□□□□□ -0.85
PRPF38B-204ENST00000467302 Q6ZVQ6 151 aa9.76□□□□□ -0.85
PRPF38B-204ENST00000467302 COX7BP24311 80 aa9.75□□□□□ -0.85
PRPF38B-204ENST00000467302 WFDC10BQ8IUB3 73 aa9.75□□□□□ -0.85
PRPF38B-204ENST00000467302 TENM3Q9P273 2699 aa9.75□□□□□ -0.85
PRPF38B-204ENST00000467302 TRBV7-4A0A0J9YYF1 115 aa9.75□□□□□ -0.85
PRPF38B-204ENST00000467302 ESRGQ1W209 222 aa9.75□□□□□ -0.85
PRPF38B-204ENST00000467302 HIGD2BQ4VC39 106 aa9.74□□□□□ -0.85
PRPF38B-204ENST00000467302 MRAPQ8TCY5 172 aa9.74□□□□□ -0.85
PRPF38B-204ENST00000467302 DPH3Q96FX2 82 aa9.74□□□□□ -0.85
PRPF38B-204ENST00000467302 CAMK2N2Q96S95 79 aa9.74□□□□□ -0.85
PRPF38B-204ENST00000467302 BCE1O60756 84 aa9.73□□□□□ -0.85
PRPF38B-204ENST00000467302 TRAV10A0A0B4J240 114 aa9.72□□□□□ -0.85
PRPF38B-204ENST00000467302 CXCL6P80162 114 aa9.72□□□□□ -0.85
PRPF38B-204ENST00000467302 M0R378 163 aa9.72□□□□□ -0.85
PRPF38B-204ENST00000467302 HAMPP81172 84 aa9.72□□□□□ -0.85
PRPF38B-204ENST00000467302 Q6ZRU5 148 aa9.72□□□□□ -0.85
PRPF38B-204ENST00000467302 C15orf56Q8N910 161 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms