RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 CFC1BP0CG36 223 aa14.01□□□□□ -0.17
ITGA4-204ENST00000465522 CFC1P0CG37 223 aa14.01□□□□□ -0.17
ITGA4-204ENST00000465522 GAGE2BQ13066 116 aa13.99□□□□□ -0.17
ITGA4-204ENST00000465522 HECTD4Q9Y4D8 3996 aa13.98□□□□□ -0.17
ITGA4-204ENST00000465522 COL5A1-AS1Q5SY13 56 aa13.98□□□□□ -0.17
ITGA4-204ENST00000465522 K7ERJ3 54 aa13.97□□□□□ -0.17
ITGA4-204ENST00000465522 A0A1B0GWB2 263 aa13.96□□□□□ -0.17
ITGA4-204ENST00000465522 LINC01620Q4KN68 170 aa13.96□□□□□ -0.17
ITGA4-204ENST00000465522 RAB37Q96AX2 223 aa13.96□□□□□ -0.17
ITGA4-204ENST00000465522 NDUFC2O95298 119 aa13.95□□□□□ -0.18
ITGA4-204ENST00000465522 FUSP35637 526 aaKnown RBP eCLIP13.95□□□□□ -0.18
ITGA4-204ENST00000465522 C9orf129Q5T035 196 aaKnown RBP13.95□□□□□ -0.18
ITGA4-204ENST00000465522 PKIGQ9Y2B9 76 aa13.95□□□□□ -0.18
ITGA4-204ENST00000465522 KMT2CQ8NEZ4 4911 aaKnown RBP13.95□□□□□ -0.18
ITGA4-204ENST00000465522 A0A0B4J2C4 111 aa13.95□□□□□ -0.18
ITGA4-204ENST00000465522 IGLV5-52A0A0A0MRZ9 124 aa13.94□□□□□ -0.18
ITGA4-204ENST00000465522 C16orf90A8MZG2 172 aa13.94□□□□□ -0.18
ITGA4-204ENST00000465522 PRR3P79522 188 aaKnown RBP13.93□□□□□ -0.18
ITGA4-204ENST00000465522 LBHQ53QV2 105 aaPredicted RBP13.93□□□□□ -0.18
ITGA4-204ENST00000465522 SDIM1Q6ZPB5 146 aa13.93□□□□□ -0.18
ITGA4-204ENST00000465522 PRO1854Q9UHT4 67 aa13.93□□□□□ -0.18
ITGA4-204ENST00000465522 A0A096LNI7 61 aa13.93□□□□□ -0.18
ITGA4-204ENST00000465522 Q8NDZ9 215 aa13.93□□□□□ -0.18
ITGA4-204ENST00000465522 IGKV2-28A0A075B6P5 120 aa13.92□□□□□ -0.18
ITGA4-204ENST00000465522 IGKV2D-28P01615 120 aa13.92□□□□□ -0.18
ITGA4-204ENST00000465522 IGKV2-24A0A0C4DH68 120 aa13.91□□□□□ -0.18
ITGA4-204ENST00000465522 LINC00336Q6ZUF6 198 aa13.9□□□□□ -0.18
ITGA4-204ENST00000465522 FAT2Q9NYQ8 4349 aa13.9□□□□□ -0.18
ITGA4-204ENST00000465522 TRAV13-2A0A0B4J235 113 aa13.9□□□□□ -0.18
ITGA4-204ENST00000465522 LINC00337Q8N6G1 96 aa13.89□□□□□ -0.19
ITGA4-204ENST00000465522 TAX1BP3O14907 124 aa13.88□□□□□ -0.19
ITGA4-204ENST00000465522 NCR3O14931 201 aa13.88□□□□□ -0.19
ITGA4-204ENST00000465522 VPREB1P12018 145 aa13.88□□□□□ -0.19
ITGA4-204ENST00000465522 KRTAP10-2P60368 255 aa13.88□□□□□ -0.19
ITGA4-204ENST00000465522 PGPEP1Q9NXJ5 209 aa13.88□□□□□ -0.19
ITGA4-204ENST00000465522 PLA2G2DQ9UNK4 145 aa13.87□□□□□ -0.19
ITGA4-204ENST00000465522 OR13C6PQ8NH95 151 aa13.87□□□□□ -0.19
ITGA4-204ENST00000465522 RYR2Q92736 4967 aa13.86□□□□□ -0.19
ITGA4-204ENST00000465522 H7C2G1 150 aa13.86□□□□□ -0.19
ITGA4-204ENST00000465522 CHTF8P0CG12 524 aa13.86□□□□□ -0.19
ITGA4-204ENST00000465522 RPL13AP40429 203 aaKnown RBP13.86□□□□□ -0.19
ITGA4-204ENST00000465522 LINC00474Q9P2X8 69 aa13.86□□□□□ -0.19
ITGA4-204ENST00000465522 FAM168BA1KXE4 195 aa13.85□□□□□ -0.19
ITGA4-204ENST00000465522 SERTAD4-AS1Q5TG53 156 aa13.85□□□□□ -0.19
ITGA4-204ENST00000465522 TRBV10-2A0A0K0K1G8 114 aa13.84□□□□□ -0.19
ITGA4-204ENST00000465522 NKAPP1Q8N9T2 125 aa13.84□□□□□ -0.19
ITGA4-204ENST00000465522 Q1RN00 199 aa13.83□□□□□ -0.2
ITGA4-204ENST00000465522 DPH3Q96FX2 82 aa13.83□□□□□ -0.2
ITGA4-204ENST00000465522 DNAH11Q96DT5 4516 aa13.83□□□□□ -0.2
ITGA4-204ENST00000465522 M0R378 163 aa13.82□□□□□ -0.2
ITGA4-204ENST00000465522 TSPAN13O95857 204 aa13.82□□□□□ -0.2
ITGA4-204ENST00000465522 S100A7L2Q5SY68 101 aa13.82□□□□□ -0.2
ITGA4-204ENST00000465522 FAM19A5Q7Z5A7 132 aaPredicted RBP13.82□□□□□ -0.2
ITGA4-204ENST00000465522 C9orf118A6NHY6 69 aa13.81□□□□□ -0.2
ITGA4-204ENST00000465522 TMEM126AQ9H061 195 aa13.81□□□□□ -0.2
ITGA4-204ENST00000465522 NAA38Q9BRA0 125 aaKnown RBP13.81□□□□□ -0.2
ITGA4-204ENST00000465522 PKD1P98161 4303 aa13.8□□□□□ -0.2
ITGA4-204ENST00000465522 KRTAP7-1Q8IUC3 87 aa13.8□□□□□ -0.2
ITGA4-204ENST00000465522 IGLV5-37A0A075B6J1 123 aa13.79□□□□□ -0.2
ITGA4-204ENST00000465522 A0A1W2PNN7 141 aa13.79□□□□□ -0.2
ITGA4-204ENST00000465522 H3BUT2 72 aa13.79□□□□□ -0.2
ITGA4-204ENST00000465522 PANO1I0J062 215 aa13.78□□□□□ -0.2
ITGA4-204ENST00000465522 C22orf24Q9Y442 160 aa13.78□□□□□ -0.2
ITGA4-204ENST00000465522 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.78□□□□□ -0.2
ITGA4-204ENST00000465522 IGLV6-57P01721 117 aa13.77□□□□□ -0.21
ITGA4-204ENST00000465522 SPACA4Q8TDM5 124 aa13.77□□□□□ -0.21
ITGA4-204ENST00000465522 TRBV10-3A0A0K0K1G6 114 aa13.76□□□□□ -0.21
ITGA4-204ENST00000465522 PSMB2P49721 201 aa13.76□□□□□ -0.21
ITGA4-204ENST00000465522 GAGE10A6NGK3 116 aa13.76□□□□□ -0.21
ITGA4-204ENST00000465522 C7orf33Q8WU49 177 aa13.76□□□□□ -0.21
ITGA4-204ENST00000465522 MRPL55Q7Z7F7 128 aaKnown RBP13.75□□□□□ -0.21
ITGA4-204ENST00000465522 SMIM11BQ8TCY0 68 aa13.74□□□□□ -0.21
ITGA4-204ENST00000465522 DNAH5Q8TE73 4624 aa13.74□□□□□ -0.21
ITGA4-204ENST00000465522 M0QXV9 152 aa13.73□□□□□ -0.21
ITGA4-204ENST00000465522 LINC00167Q96N53 147 aa13.73□□□□□ -0.21
ITGA4-204ENST00000465522 RPL28P46779 137 aaKnown RBP13.72□□□□□ -0.21
ITGA4-204ENST00000465522 A0A087WYN8 130 aa13.71□□□□□ -0.21
ITGA4-204ENST00000465522 A0A1B0GVY2 172 aa13.71□□□□□ -0.21
ITGA4-204ENST00000465522 A0A1W2PPM0 123 aa13.71□□□□□ -0.21
ITGA4-204ENST00000465522 TRIAP1O43715 76 aa13.71□□□□□ -0.21
ITGA4-204ENST00000465522 SCGB1C2P0DMR2 95 aa13.7□□□□□ -0.22
ITGA4-204ENST00000465522 RPL37AP8A6NKH3 93 aa13.7□□□□□ -0.22
ITGA4-204ENST00000465522 TRAV23DV6A0A075B6W5 121 aa13.69□□□□□ -0.22
ITGA4-204ENST00000465522 COX6CP09669 75 aa13.69□□□□□ -0.22
ITGA4-204ENST00000465522 FABP2P12104 132 aa13.69□□□□□ -0.22
ITGA4-204ENST00000465522 KRTAP10-1P60331 282 aa13.69□□□□□ -0.22
ITGA4-204ENST00000465522 CBY1Q9Y3M2 126 aa13.69□□□□□ -0.22
ITGA4-204ENST00000465522 IGLV1-50A0A075B6I6 118 aa13.68□□□□□ -0.22
ITGA4-204ENST00000465522 A0A1B0GV90 55 aa13.67□□□□□ -0.22
ITGA4-204ENST00000465522 PHF5AQ7RTV0 110 aaKnown RBP13.67□□□□□ -0.22
ITGA4-204ENST00000465522 PLAC8Q9NZF1 115 aa13.66□□□□□ -0.22
ITGA4-204ENST00000465522 FAM30AQ9NZY2 134 aa13.66□□□□□ -0.22
ITGA4-204ENST00000465522 EPM2AB3EWF7 344 aa13.65□□□□□ -0.22
ITGA4-204ENST00000465522 LYRM7Q5U5X0 104 aa13.65□□□□□ -0.22
ITGA4-204ENST00000465522 KCNQ1DNQ9H478 68 aa13.65□□□□□ -0.22
ITGA4-204ENST00000465522 RYR3Q15413 4870 aa13.65□□□□□ -0.22
ITGA4-204ENST00000465522 VAMP3Q15836 100 aa13.64□□□□□ -0.23
ITGA4-204ENST00000465522 C6orf99Q4VX62 202 aa13.64□□□□□ -0.23
ITGA4-204ENST00000465522 ZNF73O43830 326 aaPredicted RBP13.64□□□□□ -0.23
ITGA4-204ENST00000465522 PKHD1P08F94 4074 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms