RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 NUPR1O60356 82 aa7.38□□□□□ -1.23
XRN1-204ENST00000465074 FABP4P15090 132 aa7.38□□□□□ -1.23
XRN1-204ENST00000465074 LINC00158P58513 81 aa7.38□□□□□ -1.23
XRN1-204ENST00000465074 SND1-IT1Q9HBX3 110 aa7.38□□□□□ -1.23
XRN1-204ENST00000465074 TP73-AS1Q9UF72 201 aa7.38□□□□□ -1.23
XRN1-204ENST00000465074 IGKV2-28A0A075B6P5 120 aa7.37□□□□□ -1.23
XRN1-204ENST00000465074 TMEM223A0PJW6 202 aa7.37□□□□□ -1.23
XRN1-204ENST00000465074 LEPROTL1O95214 131 aa7.37□□□□□ -1.23
XRN1-204ENST00000465074 IGKV2D-28P01615 120 aa7.37□□□□□ -1.23
XRN1-204ENST00000465074 COLCA2A8K830 154 aa7.36□□□□□ -1.23
XRN1-204ENST00000465074 ZNF861PO60384 105 aa7.36□□□□□ -1.23
XRN1-204ENST00000465074 ATP6V1G1O75348 118 aa7.36□□□□□ -1.23
XRN1-204ENST00000465074 BCE1O60756 84 aa7.35□□□□□ -1.23
XRN1-204ENST00000465074 RPL28P46779 137 aaKnown RBP7.35□□□□□ -1.23
XRN1-204ENST00000465074 COX17Q14061 63 aa7.35□□□□□ -1.23
XRN1-204ENST00000465074 SFTA2Q6UW10 78 aa7.35□□□□□ -1.23
XRN1-204ENST00000465074 IGLV5-37A0A075B6J1 123 aa7.34□□□□□ -1.23
XRN1-204ENST00000465074 UBE2AP49459 152 aa7.34□□□□□ -1.23
XRN1-204ENST00000465074 LINC00310P59036 64 aa7.34□□□□□ -1.23
XRN1-204ENST00000465074 RPL24P83731 157 aaKnown RBP7.34□□□□□ -1.23
XRN1-204ENST00000465074 MEIG1Q5JSS6 88 aa7.34□□□□□ -1.23
XRN1-204ENST00000465074 PMCHL2Q9BQD1 86 aa7.34□□□□□ -1.23
XRN1-204ENST00000465074 TNXBP22105 4242 aa7.34□□□□□ -1.24
XRN1-204ENST00000465074 TMEM238LA0A1B0GVL6 79 aa7.33□□□□□ -1.24
XRN1-204ENST00000465074 SMIM13P0DJ93 91 aa7.33□□□□□ -1.24
XRN1-204ENST00000465074 HSPB8Q9UJY1 196 aa7.33□□□□□ -1.24
XRN1-204ENST00000465074 VPREB1P12018 145 aa7.32□□□□□ -1.24
XRN1-204ENST00000465074 IGLV1-50A0A075B6I6 118 aa7.31□□□□□ -1.24
XRN1-204ENST00000465074 TMEM238C9JI98 176 aa7.31□□□□□ -1.24
XRN1-204ENST00000465074 KRTAP1-4P0C5Y4 121 aa7.31□□□□□ -1.24
XRN1-204ENST00000465074 KRTAP19-1Q8IUB9 90 aa7.31□□□□□ -1.24
XRN1-204ENST00000465074 Q8NDZ9 215 aa7.31□□□□□ -1.24
XRN1-204ENST00000465074 NDUFA12Q9UI09 145 aa7.31□□□□□ -1.24
XRN1-204ENST00000465074 DPM2O94777 84 aa7.3□□□□□ -1.24
XRN1-204ENST00000465074 PLNP26678 52 aa7.3□□□□□ -1.24
XRN1-204ENST00000465074 FAM19A1Q7Z5A9 133 aa7.3□□□□□ -1.24
XRN1-204ENST00000465074 MAP1LC3CQ9BXW4 147 aa7.3□□□□□ -1.24
XRN1-204ENST00000465074 MYMXA0A1B0GTQ4 84 aa7.29□□□□□ -1.24
XRN1-204ENST00000465074 HERV-K104P63124 156 aa7.29□□□□□ -1.24
XRN1-204ENST00000465074 PRLHP81277 87 aa7.29□□□□□ -1.24
XRN1-204ENST00000465074 BOD1L2Q8IYS8 172 aa7.29□□□□□ -1.24
XRN1-204ENST00000465074 MIR7-3HGQ8N6C7 128 aa7.29□□□□□ -1.24
XRN1-204ENST00000465074 LEPROTO15243 131 aa7.28□□□□□ -1.24
XRN1-204ENST00000465074 IGKCP01834 107 aa7.28□□□□□ -1.24
XRN1-204ENST00000465074 RPL13AP40429 203 aaKnown RBP7.28□□□□□ -1.24
XRN1-204ENST00000465074 HERVK_113P61574 105 aa7.28□□□□□ -1.24
XRN1-204ENST00000465074 TMEM126AQ9H061 195 aa7.28□□□□□ -1.24
XRN1-204ENST00000465074 ANAPC11Q9NYG5 84 aa7.28□□□□□ -1.24
XRN1-204ENST00000465074 HMCN2Q8NDA2 5059 aa7.28□□□□□ -1.24
XRN1-204ENST00000465074 NCR3O14931 201 aa7.27□□□□□ -1.25
XRN1-204ENST00000465074 HIST1H2BKO60814 126 aa7.27□□□□□ -1.25
XRN1-204ENST00000465074 HIST1H2BJP06899 126 aa7.27□□□□□ -1.25
XRN1-204ENST00000465074 HIST1H2BOP23527 126 aa7.27□□□□□ -1.25
XRN1-204ENST00000465074 HIST1H2BBP33778 126 aa7.27□□□□□ -1.25
XRN1-204ENST00000465074 HIST1H2BDP58876 126 aa7.27□□□□□ -1.25
XRN1-204ENST00000465074 TSPEAR-AS2P59090 65 aa7.27□□□□□ -1.25
XRN1-204ENST00000465074 HIST1H2BCP62807 126 aa7.27□□□□□ -1.25
XRN1-204ENST00000465074 HIST2H2BEQ16778 126 aa7.27□□□□□ -1.25
XRN1-204ENST00000465074 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.27□□□□□ -1.25
XRN1-204ENST00000465074 HIST1H2BHQ93079 126 aa7.27□□□□□ -1.25
XRN1-204ENST00000465074 PLEKHB2Q96CS7 222 aa7.27□□□□□ -1.25
XRN1-204ENST00000465074 HIST1H2BNQ99877 126 aa7.27□□□□□ -1.25
XRN1-204ENST00000465074 HIST1H2BMQ99879 126 aa7.27□□□□□ -1.25
XRN1-204ENST00000465074 LINC00587B1AMM8 73 aa7.26□□□□□ -1.25
XRN1-204ENST00000465074 J3QQQ9 107 aa7.26□□□□□ -1.25
XRN1-204ENST00000465074 M0R378 163 aa7.26□□□□□ -1.25
XRN1-204ENST00000465074 LGALS3P17931 250 aaKnown RBP7.26□□□□□ -1.25
XRN1-204ENST00000465074 DAND5Q8N907 189 aa7.26□□□□□ -1.25
XRN1-204ENST00000465074 TSPAN13O95857 204 aa7.25□□□□□ -1.25
XRN1-204ENST00000465074 CRYGAP11844 174 aa7.25□□□□□ -1.25
XRN1-204ENST00000465074 A0A087X002 238 aa7.24□□□□□ -1.25
XRN1-204ENST00000465074 KRTAP13-1Q8IUC0 172 aa7.24□□□□□ -1.25
XRN1-204ENST00000465074 TYMSOSQ8TAI1 123 aa7.24□□□□□ -1.25
XRN1-204ENST00000465074 HIGD2AQ9BW72 106 aa7.24□□□□□ -1.25
XRN1-204ENST00000465074 SYS1-DBNDD2H3BUS1 97 aa7.22□□□□□ -1.25
XRN1-204ENST00000465074 NPC2P61916 151 aa7.22□□□□□ -1.25
XRN1-204ENST00000465074 MIEN1Q9BRT3 115 aa7.22□□□□□ -1.25
XRN1-204ENST00000465074 NMUP48645 174 aa7.21□□□□□ -1.26
XRN1-204ENST00000465074 PRR4Q16378 134 aa7.21□□□□□ -1.26
XRN1-204ENST00000465074 IGKV2D-26A0A0A0MRZ7 120 aa7.2□□□□□ -1.26
XRN1-204ENST00000465074 TRBV10-3A0A0K0K1G6 114 aa7.19□□□□□ -1.26
XRN1-204ENST00000465074 ETDCA0A1B0GVM5 59 aa7.19□□□□□ -1.26
XRN1-204ENST00000465074 PRYO14603 147 aa7.19□□□□□ -1.26
XRN1-204ENST00000465074 KRTDAPP60985 99 aa7.19□□□□□ -1.26
XRN1-204ENST00000465074 S100A12P80511 92 aa7.19□□□□□ -1.26
XRN1-204ENST00000465074 KRTAP4-7Q9BYR0 210 aa7.19□□□□□ -1.26
XRN1-204ENST00000465074 E9PLD3 99 aa7.18□□□□□ -1.26
XRN1-204ENST00000465074 KRTAP13-2Q52LG2 175 aa7.18□□□□□ -1.26
XRN1-204ENST00000465074 UBR4Q5T4S7 5183 aa7.17□□□□□ -1.26
XRN1-204ENST00000465074 A0A0J9YXY3 114 aa7.17□□□□□ -1.26
XRN1-204ENST00000465074 C3orf79P0CE67 100 aa7.17□□□□□ -1.26
XRN1-204ENST00000465074 DDTP30046 118 aa7.17□□□□□ -1.26
XRN1-204ENST00000465074 FAM229BQ4G0N7 80 aa7.17□□□□□ -1.26
XRN1-204ENST00000465074 S100A7L2Q5SY68 101 aa7.17□□□□□ -1.26
XRN1-204ENST00000465074 LINC01545Q5VT33 79 aa7.17□□□□□ -1.26
XRN1-204ENST00000465074 PET117Q6UWS5 81 aa7.17□□□□□ -1.26
XRN1-204ENST00000465074 ADAMTSL4-AS1Q5T5F5 129 aa7.16□□□□□ -1.26
XRN1-204ENST00000465074 KCNQ1DNQ9H478 68 aa7.16□□□□□ -1.26
XRN1-204ENST00000465074 SMCR5Q8TEV8 140 aa7.15□□□□□ -1.26
XRN1-204ENST00000465074 PPDPFQ9H3Y8 114 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms