RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 GAGE2DQ9UEU5 116 aa9.99□□□□□ -0.81
GYPC-205ENST00000464053 DNAH17Q9UFH2 4485 aa9.99□□□□□ -0.81
GYPC-205ENST00000464053 IGKV2-28A0A075B6P5 120 aa9.98□□□□□ -0.81
GYPC-205ENST00000464053 A0A0B4J2C4 111 aa9.98□□□□□ -0.81
GYPC-205ENST00000464053 IGKV2D-28P01615 120 aa9.98□□□□□ -0.81
GYPC-205ENST00000464053 NAA38Q9BRA0 125 aaKnown RBP9.98□□□□□ -0.81
GYPC-205ENST00000464053 HECTD4Q9Y4D8 3996 aa9.97□□□□□ -0.81
GYPC-205ENST00000464053 LCE6AA0A183 80 aa9.97□□□□□ -0.81
GYPC-205ENST00000464053 TLX1NBP0CAT3 122 aa9.97□□□□□ -0.81
GYPC-205ENST00000464053 PRR3P79522 188 aaKnown RBP9.97□□□□□ -0.81
GYPC-205ENST00000464053 RPL18AQ02543 176 aaKnown RBP9.97□□□□□ -0.81
GYPC-205ENST00000464053 RTL8CO15255 209 aa9.96□□□□□ -0.81
GYPC-205ENST00000464053 PRO1854Q9UHT4 67 aa9.96□□□□□ -0.81
GYPC-205ENST00000464053 C9orf129Q5T035 196 aaKnown RBP9.96□□□□□ -0.82
GYPC-205ENST00000464053 FUSP35637 526 aaKnown RBP eCLIP9.95□□□□□ -0.821e-6■■□□□ 11.7
GYPC-205ENST00000464053 TNP2Q05952 138 aa9.95□□□□□ -0.82
GYPC-205ENST00000464053 PGPEP1Q9NXJ5 209 aa9.95□□□□□ -0.82
GYPC-205ENST00000464053 LINC01620Q4KN68 170 aa9.94□□□□□ -0.82
GYPC-205ENST00000464053 LINC00337Q8N6G1 96 aa9.94□□□□□ -0.82
GYPC-205ENST00000464053 LOC107984640A0A0U1RRK4 108 aa9.93□□□□□ -0.82
GYPC-205ENST00000464053 A0A1B0GV90 55 aa9.93□□□□□ -0.82
GYPC-205ENST00000464053 C9orf118A6NHY6 69 aa9.93□□□□□ -0.82
GYPC-205ENST00000464053 H7C2G1 150 aa9.93□□□□□ -0.82
GYPC-205ENST00000464053 TSPAN13O95857 204 aa9.93□□□□□ -0.82
GYPC-205ENST00000464053 H3BUT2 72 aa9.93□□□□□ -0.82
GYPC-205ENST00000464053 NDUFC2O95298 119 aa9.93□□□□□ -0.82
GYPC-205ENST00000464053 GAGE2BQ13066 116 aa9.93□□□□□ -0.82
GYPC-205ENST00000464053 RPL13AP40429 203 aaKnown RBP9.92□□□□□ -0.82
GYPC-205ENST00000464053 C9orf163Q8N9P6 203 aa9.92□□□□□ -0.82
GYPC-205ENST00000464053 NCR3O14931 201 aa9.91□□□□□ -0.82
GYPC-205ENST00000464053 A0A096LNI7 61 aa9.9□□□□□ -0.82
GYPC-205ENST00000464053 VPREB1P12018 145 aa9.89□□□□□ -0.83
GYPC-205ENST00000464053 DNAH11Q96DT5 4516 aa9.89□□□□□ -0.83
GYPC-205ENST00000464053 KMT2CQ8NEZ4 4911 aaKnown RBP9.89□□□□□ -0.83
GYPC-205ENST00000464053 TRAV13-2A0A0B4J235 113 aa9.89□□□□□ -0.83
GYPC-205ENST00000464053 FAM168BA1KXE4 195 aa9.89□□□□□ -0.83
GYPC-205ENST00000464053 SERTAD4-AS1Q5TG53 156 aa9.89□□□□□ -0.83
GYPC-205ENST00000464053 FAT2Q9NYQ8 4349 aa9.88□□□□□ -0.83
GYPC-205ENST00000464053 RYR2Q92736 4967 aa9.88□□□□□ -0.83
GYPC-205ENST00000464053 Q1RN00 199 aa9.88□□□□□ -0.83
GYPC-205ENST00000464053 OR13C6PQ8NH95 151 aa9.88□□□□□ -0.83
GYPC-205ENST00000464053 IGKV2-24A0A0C4DH68 120 aa9.87□□□□□ -0.83
GYPC-205ENST00000464053 C16orf90A8MZG2 172 aa9.87□□□□□ -0.83
GYPC-205ENST00000464053 SDIM1Q6ZPB5 146 aa9.87□□□□□ -0.83
GYPC-205ENST00000464053 A0A1W2PPM0 123 aa9.86□□□□□ -0.83
GYPC-205ENST00000464053 CHTF8P0CG12 524 aa9.86□□□□□ -0.83
GYPC-205ENST00000464053 KRTAP7-1Q8IUC3 87 aa9.86□□□□□ -0.83
GYPC-205ENST00000464053 PKD1P98161 4303 aa9.84□□□□□ -0.83
GYPC-205ENST00000464053 IGLV5-52A0A0A0MRZ9 124 aa9.84□□□□□ -0.83
GYPC-205ENST00000464053 TRBV10-2A0A0K0K1G8 114 aa9.84□□□□□ -0.83
GYPC-205ENST00000464053 TRIAP1O43715 76 aa9.84□□□□□ -0.83
GYPC-205ENST00000464053 PSMB2P49721 201 aa9.84□□□□□ -0.83
GYPC-205ENST00000464053 KRTAP10-2P60368 255 aa9.84□□□□□ -0.83
GYPC-205ENST00000464053 PLA2G2DQ9UNK4 145 aa9.84□□□□□ -0.83
GYPC-205ENST00000464053 PANO1I0J062 215 aa9.83□□□□□ -0.84
GYPC-205ENST00000464053 S100A7L2Q5SY68 101 aa9.83□□□□□ -0.84
GYPC-205ENST00000464053 SMIM11BQ8TCY0 68 aa9.83□□□□□ -0.84
GYPC-205ENST00000464053 VAMP3Q15836 100 aa9.82□□□□□ -0.84
GYPC-205ENST00000464053 FAM19A5Q7Z5A7 132 aaPredicted RBP9.82□□□□□ -0.84
GYPC-205ENST00000464053 TMEM126AQ9H061 195 aa9.82□□□□□ -0.84
GYPC-205ENST00000464053 TRBV10-3A0A0K0K1G6 114 aa9.82□□□□□ -0.84
GYPC-205ENST00000464053 A0A1W2PNN7 141 aa9.82□□□□□ -0.84
GYPC-205ENST00000464053 M0R378 163 aa9.82□□□□□ -0.84
GYPC-205ENST00000464053 IGLV6-57P01721 117 aa9.82□□□□□ -0.84
GYPC-205ENST00000464053 FABP2P12104 132 aa9.82□□□□□ -0.84
GYPC-205ENST00000464053 DNAH5Q8TE73 4624 aa9.81□□□□□ -0.84
GYPC-205ENST00000464053 NKAPP1Q8N9T2 125 aa9.81□□□□□ -0.84
GYPC-205ENST00000464053 IGLV5-37A0A075B6J1 123 aa9.8□□□□□ -0.84
GYPC-205ENST00000464053 GAGE10A6NGK3 116 aa9.8□□□□□ -0.84
GYPC-205ENST00000464053 RPL28P46779 137 aaKnown RBP9.8□□□□□ -0.84
GYPC-205ENST00000464053 C7orf33Q8WU49 177 aa9.8□□□□□ -0.84
GYPC-205ENST00000464053 SCGB1C2P0DMR2 95 aa9.79□□□□□ -0.84
GYPC-205ENST00000464053 C22orf24Q9Y442 160 aa9.79□□□□□ -0.84
GYPC-205ENST00000464053 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.79□□□□□ -0.84
GYPC-205ENST00000464053 PKIGQ9Y2B9 76 aa9.79□□□□□ -0.84
GYPC-205ENST00000464053 SPCS1Q9Y6A9 102 aa9.79□□□□□ -0.84
GYPC-205ENST00000464053 SPACA4Q8TDM5 124 aa9.77□□□□□ -0.85
GYPC-205ENST00000464053 K7EP34 96 aa9.76□□□□□ -0.85
GYPC-205ENST00000464053 TCL1BO95988 128 aa9.76□□□□□ -0.85
GYPC-205ENST00000464053 MRPL55Q7Z7F7 128 aaKnown RBP9.76□□□□□ -0.85
GYPC-205ENST00000464053 LINC00167Q96N53 147 aa9.76□□□□□ -0.85
GYPC-205ENST00000464053 LINC00474Q9P2X8 69 aa9.76□□□□□ -0.85
GYPC-205ENST00000464053 RPL37AP8A6NKH3 93 aa9.75□□□□□ -0.85
GYPC-205ENST00000464053 CLEC2BQ92478 149 aa9.75□□□□□ -0.85
GYPC-205ENST00000464053 TRAV23DV6A0A075B6W5 121 aa9.75□□□□□ -0.85
GYPC-205ENST00000464053 M0QXV9 152 aa9.75□□□□□ -0.85
GYPC-205ENST00000464053 COX6CP09669 75 aa9.75□□□□□ -0.85
GYPC-205ENST00000464053 C6orf99Q4VX62 202 aa9.74□□□□□ -0.85
GYPC-205ENST00000464053 DPH3Q96FX2 82 aa9.74□□□□□ -0.85
GYPC-205ENST00000464053 LINC00336Q6ZUF6 198 aa9.73□□□□□ -0.85
GYPC-205ENST00000464053 IGLV1-50A0A075B6I6 118 aa9.72□□□□□ -0.85
GYPC-205ENST00000464053 LYRM7Q5U5X0 104 aa9.72□□□□□ -0.85
GYPC-205ENST00000464053 PHF5AQ7RTV0 110 aaKnown RBP9.72□□□□□ -0.85
GYPC-205ENST00000464053 FAM218AQ96MZ4 157 aa9.72□□□□□ -0.85
GYPC-205ENST00000464053 H3BMG7 143 aa9.72□□□□□ -0.85
GYPC-205ENST00000464053 UBE2V1Q13404 147 aa9.72□□□□□ -0.85
GYPC-205ENST00000464053 A0A087WYN8 130 aa9.71□□□□□ -0.85
GYPC-205ENST00000464053 ZNF73O43830 326 aaPredicted RBP9.71□□□□□ -0.85
GYPC-205ENST00000464053 GTF2H5Q6ZYL4 71 aa9.71□□□□□ -0.85
GYPC-205ENST00000464053 KCNQ1DNQ9H478 68 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms