RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 CHTOPQ9Y3Y2 248 aaKnown RBP11.18□□□□□ -0.62
SF3A1-205ENST00000463818 LEPROTL1O95214 131 aa11.17□□□□□ -0.62
SF3A1-205ENST00000463818 ATP6V1G1O75348 118 aa11.16□□□□□ -0.62
SF3A1-205ENST00000463818 PRR4Q16378 134 aa11.16□□□□□ -0.62
SF3A1-205ENST00000463818 COA6Q5JTJ3 125 aaKnown RBP11.16□□□□□ -0.62
SF3A1-205ENST00000463818 HSPB8Q9UJY1 196 aa11.15□□□□□ -0.62
SF3A1-205ENST00000463818 A0A087X002 238 aa11.14□□□□□ -0.63
SF3A1-205ENST00000463818 CRYGAP11844 174 aa11.14□□□□□ -0.63
SF3A1-205ENST00000463818 TSPAN13O95857 204 aa11.13□□□□□ -0.63
SF3A1-205ENST00000463818 UBE2AP49459 152 aa11.13□□□□□ -0.63
SF3A1-205ENST00000463818 KRTAP13-1Q8IUC0 172 aa11.13□□□□□ -0.63
SF3A1-205ENST00000463818 ANAPC11Q9NYG5 84 aa11.13□□□□□ -0.63
SF3A1-205ENST00000463818 ERG28Q9UKR5 140 aa11.13□□□□□ -0.63
SF3A1-205ENST00000463818 IGKV2-28A0A075B6P5 120 aa11.12□□□□□ -0.63
SF3A1-205ENST00000463818 IGKV2D-28P01615 120 aa11.12□□□□□ -0.63
SF3A1-205ENST00000463818 TYMSOSQ8TAI1 123 aa11.12□□□□□ -0.63
SF3A1-205ENST00000463818 ZNF625Q96I27 306 aaPredicted RBP11.12□□□□□ -0.63
SF3A1-205ENST00000463818 SND1-IT1Q9HBX3 110 aa11.12□□□□□ -0.63
SF3A1-205ENST00000463818 TMEM223A0PJW6 202 aa11.11□□□□□ -0.63
SF3A1-205ENST00000463818 TMEM170BQ5T4T1 132 aa11.11□□□□□ -0.63
SF3A1-205ENST00000463818 SFTA2Q6UW10 78 aa11.11□□□□□ -0.63
SF3A1-205ENST00000463818 VPREB1P12018 145 aa11.1□□□□□ -0.63
SF3A1-205ENST00000463818 COX17Q14061 63 aa11.1□□□□□ -0.63
SF3A1-205ENST00000463818 RPL24P83731 157 aaKnown RBP11.09□□□□□ -0.63
SF3A1-205ENST00000463818 FABP4P15090 132 aa11.07□□□□□ -0.64
SF3A1-205ENST00000463818 PLNP26678 52 aa11.07□□□□□ -0.64
SF3A1-205ENST00000463818 TMEM238C9JI98 176 aa11.06□□□□□ -0.64
SF3A1-205ENST00000463818 KRTAP13-2Q52LG2 175 aa11.06□□□□□ -0.64
SF3A1-205ENST00000463818 Q8NDZ9 215 aa11.06□□□□□ -0.64
SF3A1-205ENST00000463818 PRLHP81277 87 aa11.05□□□□□ -0.64
SF3A1-205ENST00000463818 FAM19A1Q7Z5A9 133 aa11.05□□□□□ -0.64
SF3A1-205ENST00000463818 MAP1LC3CQ9BXW4 147 aa11.05□□□□□ -0.64
SF3A1-205ENST00000463818 TMEM126AQ9H061 195 aa11.05□□□□□ -0.64
SF3A1-205ENST00000463818 FAM229BQ4G0N7 80 aa11.04□□□□□ -0.64
SF3A1-205ENST00000463818 M0R378 163 aa11.03□□□□□ -0.64
SF3A1-205ENST00000463818 DPM2O94777 84 aa11.03□□□□□ -0.64
SF3A1-205ENST00000463818 LINC00158P58513 81 aa11.03□□□□□ -0.64
SF3A1-205ENST00000463818 H0Y8G0 127 aa11.02□□□□□ -0.65
SF3A1-205ENST00000463818 SYS1-DBNDD2H3BUS1 97 aa11.02□□□□□ -0.65
SF3A1-205ENST00000463818 A0A0U1RRA0 63 aa11.01□□□□□ -0.65
SF3A1-205ENST00000463818 IGKCP01834 107 aa11□□□□□ -0.65
SF3A1-205ENST00000463818 LINC01545Q5VT33 79 aa11□□□□□ -0.65
SF3A1-205ENST00000463818 IGKV2D-26A0A0A0MRZ7 120 aa10.99□□□□□ -0.65
SF3A1-205ENST00000463818 PET117Q6UWS5 81 aa10.99□□□□□ -0.65
SF3A1-205ENST00000463818 PLEKHB2Q96CS7 222 aa10.99□□□□□ -0.65
SF3A1-205ENST00000463818 HERV-K104P63124 156 aa10.98□□□□□ -0.65
SF3A1-205ENST00000463818 LINC00304Q8N9R0 145 aa10.98□□□□□ -0.65
SF3A1-205ENST00000463818 PMCHL2Q9BQD1 86 aa10.98□□□□□ -0.65
SF3A1-205ENST00000463818 LEPROTO15243 131 aa10.96□□□□□ -0.65
SF3A1-205ENST00000463818 SMIM13P0DJ93 91 aa10.96□□□□□ -0.65
SF3A1-205ENST00000463818 TSPEAR-AS2P59090 65 aa10.96□□□□□ -0.65
SF3A1-205ENST00000463818 C3orf79P0CE67 100 aa10.95□□□□□ -0.66
SF3A1-205ENST00000463818 HERVK_113P61574 105 aa10.95□□□□□ -0.66
SF3A1-205ENST00000463818 HIGD2AQ9BW72 106 aa10.95□□□□□ -0.66
SF3A1-205ENST00000463818 NDUFA12Q9UI09 145 aa10.95□□□□□ -0.66
SF3A1-205ENST00000463818 MEIG1Q5JSS6 88 aa10.94□□□□□ -0.66
SF3A1-205ENST00000463818 RETNLBQ9BQ08 111 aa10.94□□□□□ -0.66
SF3A1-205ENST00000463818 E9PLD3 99 aa10.93□□□□□ -0.66
SF3A1-205ENST00000463818 J3QQQ9 107 aa10.93□□□□□ -0.66
SF3A1-205ENST00000463818 NMUP48645 174 aa10.93□□□□□ -0.66
SF3A1-205ENST00000463818 BOD1L2Q8IYS8 172 aa10.93□□□□□ -0.66
SF3A1-205ENST00000463818 MUC2Q02817 5179 aa10.92□□□□□ -0.66
SF3A1-205ENST00000463818 MYMXA0A1B0GTQ4 84 aa10.92□□□□□ -0.66
SF3A1-205ENST00000463818 LINC00587B1AMM8 73 aa10.92□□□□□ -0.66
SF3A1-205ENST00000463818 MIR7-3HGQ8N6C7 128 aa10.92□□□□□ -0.66
SF3A1-205ENST00000463818 C3orf22Q8N5N4 141 aa10.91□□□□□ -0.66
SF3A1-205ENST00000463818 HIST3H2BBQ8N257 126 aa10.9□□□□□ -0.66
SF3A1-205ENST00000463818 SPRR4Q96PI1 79 aa10.89□□□□□ -0.67
SF3A1-205ENST00000463818 PRYO14603 147 aa10.88□□□□□ -0.67
SF3A1-205ENST00000463818 NCR3O14931 201 aa10.88□□□□□ -0.67
SF3A1-205ENST00000463818 CTAG1AP78358 180 aa10.88□□□□□ -0.67
SF3A1-205ENST00000463818 LOC107984156A0A0G2JMH3 177 aa10.87□□□□□ -0.67
SF3A1-205ENST00000463818 AKR1D1P51857 326 aa10.87□□□□□ -0.67
SF3A1-205ENST00000463818 KRTDAPP60985 99 aa10.87□□□□□ -0.67
SF3A1-205ENST00000463818 ARL17AQ8IVW1 177 aa10.87□□□□□ -0.67
SF3A1-205ENST00000463818 HIST1H2BLQ99880 126 aa10.87□□□□□ -0.67
SF3A1-205ENST00000463818 KCNQ1DNQ9H478 68 aa10.87□□□□□ -0.67
SF3A1-205ENST00000463818 LGALS3P17931 250 aaKnown RBP10.86□□□□□ -0.67
SF3A1-205ENST00000463818 C20orf202A1L168 122 aa10.85□□□□□ -0.67
SF3A1-205ENST00000463818 SPRR1AP35321 89 aa10.85□□□□□ -0.67
SF3A1-205ENST00000463818 LINC00337Q8N6G1 96 aa10.85□□□□□ -0.67
SF3A1-205ENST00000463818 SMCR5Q8TEV8 140 aa10.85□□□□□ -0.67
SF3A1-205ENST00000463818 IGLV7-46A0A075B6I9 117 aa10.84□□□□□ -0.67
SF3A1-205ENST00000463818 TRBV10-3A0A0K0K1G6 114 aa10.84□□□□□ -0.67
SF3A1-205ENST00000463818 ZNF706Q9Y5V0 76 aaPredicted RBP10.84□□□□□ -0.67
SF3A1-205ENST00000463818 ETDCA0A1B0GVM5 59 aa10.83□□□□□ -0.68
SF3A1-205ENST00000463818 KRTAP4-16G5E9R7 235 aaPredicted RBP10.83□□□□□ -0.68
SF3A1-205ENST00000463818 A0A0J9YXY3 114 aa10.82□□□□□ -0.68
SF3A1-205ENST00000463818 S100A6P06703 90 aa10.82□□□□□ -0.68
SF3A1-205ENST00000463818 SPAG11AQ6PDA7 123 aa10.82□□□□□ -0.68
SF3A1-205ENST00000463818 DAND5Q8N907 189 aa10.82□□□□□ -0.68
SF3A1-205ENST00000463818 C5orf52A6NGY3 159 aa10.81□□□□□ -0.68
SF3A1-205ENST00000463818 S100A2P29034 98 aa10.81□□□□□ -0.68
SF3A1-205ENST00000463818 TPRXLQ17RH7 258 aa10.8□□□□□ -0.68
SF3A1-205ENST00000463818 C4orf48Q5BLP8 95 aa10.8□□□□□ -0.68
SF3A1-205ENST00000463818 CDIP1Q9H305 208 aa10.8□□□□□ -0.68
SF3A1-205ENST00000463818 PPDPFQ9H3Y8 114 aa10.8□□□□□ -0.68
SF3A1-205ENST00000463818 A0A0U1RQV1 116 aa10.79□□□□□ -0.68
SF3A1-205ENST00000463818 TIMM17BO60830 172 aa10.79□□□□□ -0.68
SF3A1-205ENST00000463818 LITAFQ99732 161 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms