RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 UBE2BP63146 152 aa11.89□□□□□ -0.51
VARS-221ENST00000463184 LINC01545Q5VT33 79 aa11.89□□□□□ -0.51
VARS-221ENST00000463184 M0QXV9 152 aa11.88□□□□□ -0.51
VARS-221ENST00000463184 RPL13AP40429 203 aaKnown RBP11.88□□□□□ -0.51
VARS-221ENST00000463184 KRTDAPP60985 99 aa11.88□□□□□ -0.51
VARS-221ENST00000463184 KRTAP7-1Q8IUC3 87 aa11.88□□□□□ -0.51
VARS-221ENST00000463184 NDUFC2-KCTD14E9PQ53 114 aa11.86□□□□□ -0.51
VARS-221ENST00000463184 SNRPEP62304 92 aaKnown RBP11.86□□□□□ -0.51
VARS-221ENST00000463184 SFTA2Q6UW10 78 aa11.86□□□□□ -0.51
VARS-221ENST00000463184 HERVK_113P61574 105 aa11.85□□□□□ -0.51
VARS-221ENST00000463184 PRR4Q16378 134 aa11.85□□□□□ -0.51
VARS-221ENST00000463184 HIST1H2BLQ99880 126 aa11.85□□□□□ -0.51
VARS-221ENST00000463184 C20orf202A1L168 122 aa11.83□□□□□ -0.52
VARS-221ENST00000463184 C5orf52A6NGY3 159 aa11.83□□□□□ -0.52
VARS-221ENST00000463184 LEPROTO15243 131 aa11.83□□□□□ -0.52
VARS-221ENST00000463184 C9orf129Q5T035 196 aaKnown RBP11.82□□□□□ -0.52
VARS-221ENST00000463184 PLEKHB2Q96CS7 222 aa11.82□□□□□ -0.52
VARS-221ENST00000463184 ZNF625Q96I27 306 aaPredicted RBP11.82□□□□□ -0.52
VARS-221ENST00000463184 ZNF861PO60384 105 aa11.8□□□□□ -0.52
VARS-221ENST00000463184 AKR1D1P51857 326 aa11.79□□□□□ -0.52
VARS-221ENST00000463184 MUC2Q02817 5179 aa11.78□□□□□ -0.52
VARS-221ENST00000463184 NDUFA12Q9UI09 145 aa11.78□□□□□ -0.52
VARS-221ENST00000463184 ERG28Q9UKR5 140 aa11.78□□□□□ -0.52
VARS-221ENST00000463184 A0A0U1RQV1 116 aa11.77□□□□□ -0.53
VARS-221ENST00000463184 MYMXA0A1B0GTQ4 84 aa11.77□□□□□ -0.53
VARS-221ENST00000463184 E9PLD3 99 aa11.77□□□□□ -0.53
VARS-221ENST00000463184 J3QQQ9 107 aa11.77□□□□□ -0.53
VARS-221ENST00000463184 HERV-K104P63124 156 aa11.77□□□□□ -0.53
VARS-221ENST00000463184 COX17Q14061 63 aa11.77□□□□□ -0.53
VARS-221ENST00000463184 LGALS3P17931 250 aaKnown RBP11.76□□□□□ -0.53
VARS-221ENST00000463184 PFN2P35080 140 aa11.76□□□□□ -0.53
VARS-221ENST00000463184 TSPEAR-AS2P59090 65 aa11.76□□□□□ -0.53
VARS-221ENST00000463184 NMUP48645 174 aa11.75□□□□□ -0.53
VARS-221ENST00000463184 XAGE1AQ9HD64 81 aa11.75□□□□□ -0.53
VARS-221ENST00000463184 LBHQ53QV2 105 aaPredicted RBP11.74□□□□□ -0.53
VARS-221ENST00000463184 C22orf24Q9Y442 160 aa11.74□□□□□ -0.53
VARS-221ENST00000463184 LINC00587B1AMM8 73 aa11.73□□□□□ -0.53
VARS-221ENST00000463184 MEIG1Q5JSS6 88 aa11.72□□□□□ -0.53
VARS-221ENST00000463184 LINC00158P58513 81 aa11.71□□□□□ -0.53
VARS-221ENST00000463184 ATOH7Q8N100 152 aa11.71□□□□□ -0.53
VARS-221ENST00000463184 TSPAN13O95857 204 aa11.7□□□□□ -0.54
VARS-221ENST00000463184 SMIM13P0DJ93 91 aa11.69□□□□□ -0.54
VARS-221ENST00000463184 SND1-IT1Q9HBX3 110 aa11.69□□□□□ -0.54
VARS-221ENST00000463184 TP73-AS1Q9UF72 201 aa11.69□□□□□ -0.54
VARS-221ENST00000463184 A0A0U1RRA0 63 aa11.68□□□□□ -0.54
VARS-221ENST00000463184 IGKV2D-26A0A0A0MRZ7 120 aa11.67□□□□□ -0.54
VARS-221ENST00000463184 RPL28P46779 137 aaKnown RBP11.67□□□□□ -0.54
VARS-221ENST00000463184 TMA7Q9Y2S6 64 aaKnown RBP11.67□□□□□ -0.54
VARS-221ENST00000463184 SCGB1D1O95968 90 aa11.66□□□□□ -0.54
VARS-221ENST00000463184 CRYGAP11844 174 aa11.66□□□□□ -0.54
VARS-221ENST00000463184 ANKRD39Q53RE8 183 aa11.66□□□□□ -0.54
VARS-221ENST00000463184 MRPL55Q7Z7F7 128 aaKnown RBP11.66□□□□□ -0.54
VARS-221ENST00000463184 A0A087X002 238 aa11.65□□□□□ -0.54
VARS-221ENST00000463184 BCE1O60756 84 aa11.65□□□□□ -0.54
VARS-221ENST00000463184 TYMSOSQ8TAI1 123 aa11.65□□□□□ -0.54
VARS-221ENST00000463184 A0A0J9YXY3 114 aa11.64□□□□□ -0.55
VARS-221ENST00000463184 MIR7-3HGQ8N6C7 128 aa11.64□□□□□ -0.55
VARS-221ENST00000463184 ZNF815PA8K554 130 aa11.63□□□□□ -0.55
VARS-221ENST00000463184 HSBP1L1C9JCN9 74 aa11.63□□□□□ -0.55
VARS-221ENST00000463184 KRTAP9-2Q9BYQ4 174 aa11.63□□□□□ -0.55
VARS-221ENST00000463184 IGLV5-37A0A075B6J1 123 aa11.62□□□□□ -0.55
VARS-221ENST00000463184 RPL24P83731 157 aaKnown RBP11.61□□□□□ -0.55
VARS-221ENST00000463184 TTTY13Q9BZ97 58 aa11.61□□□□□ -0.55
VARS-221ENST00000463184 NKAPP1Q8N9T2 125 aa11.6□□□□□ -0.55
VARS-221ENST00000463184 LINC00167Q96N53 147 aa11.6□□□□□ -0.55
VARS-221ENST00000463184 VPREB1P12018 145 aa11.59□□□□□ -0.55
VARS-221ENST00000463184 RPL37AP8A6NKH3 93 aa11.58□□□□□ -0.56
VARS-221ENST00000463184 TIMM17BO60830 172 aa11.58□□□□□ -0.56
VARS-221ENST00000463184 DAND5Q8N907 189 aa11.58□□□□□ -0.56
VARS-221ENST00000463184 LOC107984156A0A0G2JMH3 177 aa11.57□□□□□ -0.56
VARS-221ENST00000463184 JOSD1Q15040 202 aaPredicted RBP11.57□□□□□ -0.56
VARS-221ENST00000463184 ARL17AQ8IVW1 177 aa11.57□□□□□ -0.56
VARS-221ENST00000463184 ADAMTSL4-AS1Q5T5F5 129 aa11.56□□□□□ -0.56
VARS-221ENST00000463184 LCE2AQ5TA79 106 aaPredicted RBP11.56□□□□□ -0.56
VARS-221ENST00000463184 PCP2Q8IVA1 136 aa11.56□□□□□ -0.56
VARS-221ENST00000463184 BOD1L2Q8IYS8 172 aa11.56□□□□□ -0.56
VARS-221ENST00000463184 SCGB1D4Q6XE38 83 aa11.55□□□□□ -0.56
VARS-221ENST00000463184 Q8NDZ9 215 aa11.55□□□□□ -0.56
VARS-221ENST00000463184 LITAFQ99732 161 aa11.55□□□□□ -0.56
VARS-221ENST00000463184 ANAPC11Q9NYG5 84 aa11.55□□□□□ -0.56
VARS-221ENST00000463184 MIEN1Q9BRT3 115 aa11.54□□□□□ -0.56
VARS-221ENST00000463184 GAGE10A6NGK3 116 aa11.53□□□□□ -0.56
VARS-221ENST00000463184 UBE2AP49459 152 aa11.53□□□□□ -0.56
VARS-221ENST00000463184 FAM229BQ4G0N7 80 aa11.53□□□□□ -0.56
VARS-221ENST00000463184 KRTAP13-2Q52LG2 175 aa11.53□□□□□ -0.56
VARS-221ENST00000463184 KRTAP13-1Q8IUC0 172 aa11.53□□□□□ -0.56
VARS-221ENST00000463184 TMEM238C9JI98 176 aa11.51□□□□□ -0.57
VARS-221ENST00000463184 M0R378 163 aa11.51□□□□□ -0.57
VARS-221ENST00000463184 LINC00304Q8N9R0 145 aa11.51□□□□□ -0.57
VARS-221ENST00000463184 FAT4Q6V0I7 4981 aa11.51□□□□□ -0.57
VARS-221ENST00000463184 NPC2P61916 151 aa11.5□□□□□ -0.57
VARS-221ENST00000463184 SOSTDC1Q6X4U4 206 aa11.5□□□□□ -0.57
VARS-221ENST00000463184 RETNLBQ9BQ08 111 aa11.5□□□□□ -0.57
VARS-221ENST00000463184 LINC00308Q8TCZ7 52 aa11.49□□□□□ -0.57
VARS-221ENST00000463184 NDUFC2O95298 119 aa11.48□□□□□ -0.57
VARS-221ENST00000463184 CTAG1AP78358 180 aa11.48□□□□□ -0.57
VARS-221ENST00000463184 TPRXLQ17RH7 258 aa11.48□□□□□ -0.57
VARS-221ENST00000463184 SPANXDQ9BXN6 97 aa11.48□□□□□ -0.57
VARS-221ENST00000463184 CDIP1Q9H305 208 aa11.48□□□□□ -0.57
VARS-221ENST00000463184 SPANXCQ9NY87 97 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms