RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 MAP1LC3CQ9BXW4 147 aa10.9□□□□□ -0.66
LINC00960-201ENST00000463183 NKAPP1Q8N9T2 125 aa10.89□□□□□ -0.67
LINC00960-201ENST00000463183 ERG28Q9UKR5 140 aa10.89□□□□□ -0.67
LINC00960-201ENST00000463183 SYS1-DBNDD2H3BUS1 97 aa10.88□□□□□ -0.67
LINC00960-201ENST00000463183 PRR26Q8N8Z3 221 aa10.88□□□□□ -0.67
LINC00960-201ENST00000463183 LINC00167Q96N53 147 aa10.88□□□□□ -0.67
LINC00960-201ENST00000463183 S100A2P29034 98 aa10.87□□□□□ -0.67
LINC00960-201ENST00000463183 TP73-AS1Q9UF72 201 aa10.87□□□□□ -0.67
LINC00960-201ENST00000463183 A0A0U1RRA0 63 aa10.86□□□□□ -0.67
LINC00960-201ENST00000463183 C3orf79P0CE67 100 aa10.86□□□□□ -0.67
LINC00960-201ENST00000463183 TMA7Q9Y2S6 64 aaKnown RBP10.86□□□□□ -0.67
LINC00960-201ENST00000463183 PET117Q6UWS5 81 aa10.85□□□□□ -0.67
LINC00960-201ENST00000463183 TMEM223A0PJW6 202 aa10.84□□□□□ -0.67
LINC00960-201ENST00000463183 ZNF861PO60384 105 aa10.84□□□□□ -0.67
LINC00960-201ENST00000463183 SND1-IT1Q9HBX3 110 aa10.84□□□□□ -0.67
LINC00960-201ENST00000463183 IGKV2-28A0A075B6P5 120 aa10.84□□□□□ -0.67
LINC00960-201ENST00000463183 IGKV2D-28P01615 120 aa10.84□□□□□ -0.67
LINC00960-201ENST00000463183 LINC01545Q5VT33 79 aa10.84□□□□□ -0.67
LINC00960-201ENST00000463183 BCE1O60756 84 aa10.83□□□□□ -0.68
LINC00960-201ENST00000463183 LINC00158P58513 81 aa10.83□□□□□ -0.68
LINC00960-201ENST00000463183 KRTDAPP60985 99 aa10.83□□□□□ -0.68
LINC00960-201ENST00000463183 IGLV5-37A0A075B6J1 123 aa10.82□□□□□ -0.68
LINC00960-201ENST00000463183 DPM2O94777 84 aa10.81□□□□□ -0.68
LINC00960-201ENST00000463183 KRTAP1-4P0C5Y4 121 aa10.81□□□□□ -0.68
LINC00960-201ENST00000463183 PLNP26678 52 aa10.81□□□□□ -0.68
LINC00960-201ENST00000463183 RPL28P46779 137 aaKnown RBP10.81□□□□□ -0.68
LINC00960-201ENST00000463183 COX17Q14061 63 aa10.81□□□□□ -0.68
LINC00960-201ENST00000463183 SFTA2Q6UW10 78 aa10.81□□□□□ -0.68
LINC00960-201ENST00000463183 LRP2P98164 4655 aa10.8□□□□□ -0.68
LINC00960-201ENST00000463183 MEIG1Q5JSS6 88 aa10.8□□□□□ -0.68
LINC00960-201ENST00000463183 PMCHL2Q9BQD1 86 aa10.8□□□□□ -0.68
LINC00960-201ENST00000463183 IGKCP01834 107 aa10.79□□□□□ -0.68
LINC00960-201ENST00000463183 VPREB1P12018 145 aa10.79□□□□□ -0.68
LINC00960-201ENST00000463183 UBE2AP49459 152 aa10.79□□□□□ -0.68
LINC00960-201ENST00000463183 RPL24P83731 157 aaKnown RBP10.79□□□□□ -0.68
LINC00960-201ENST00000463183 SMIM13P0DJ93 91 aa10.78□□□□□ -0.68
LINC00960-201ENST00000463183 IGLV1-50A0A075B6I6 118 aa10.77□□□□□ -0.69
LINC00960-201ENST00000463183 Q8NDZ9 215 aa10.77□□□□□ -0.69
LINC00960-201ENST00000463183 C20orf202A1L168 122 aa10.75□□□□□ -0.69
LINC00960-201ENST00000463183 TMEM238C9JI98 176 aa10.75□□□□□ -0.69
LINC00960-201ENST00000463183 NDUFA12Q9UI09 145 aa10.75□□□□□ -0.69
LINC00960-201ENST00000463183 AKR1D1P51857 326 aa10.74□□□□□ -0.69
LINC00960-201ENST00000463183 PRLHP81277 87 aa10.74□□□□□ -0.69
LINC00960-201ENST00000463183 FAM19A1Q7Z5A9 133 aa10.73□□□□□ -0.69
LINC00960-201ENST00000463183 RPL13AP40429 203 aaKnown RBP10.72□□□□□ -0.69
LINC00960-201ENST00000463183 MIR7-3HGQ8N6C7 128 aa10.72□□□□□ -0.69
LINC00960-201ENST00000463183 TMEM126AQ9H061 195 aa10.72□□□□□ -0.69
LINC00960-201ENST00000463183 MYMXA0A1B0GTQ4 84 aa10.71□□□□□ -0.69
LINC00960-201ENST00000463183 TSPEAR-AS2P59090 65 aa10.71□□□□□ -0.69
LINC00960-201ENST00000463183 HERV-K104P63124 156 aa10.71□□□□□ -0.69
LINC00960-201ENST00000463183 BOD1L2Q8IYS8 172 aa10.71□□□□□ -0.69
LINC00960-201ENST00000463183 ANAPC11Q9NYG5 84 aa10.71□□□□□ -0.69
LINC00960-201ENST00000463183 NCR3O14931 201 aa10.7□□□□□ -0.7
LINC00960-201ENST00000463183 LEPROTO15243 131 aa10.7□□□□□ -0.7
LINC00960-201ENST00000463183 HERVK_113P61574 105 aa10.7□□□□□ -0.7
LINC00960-201ENST00000463183 KRTAP3-3Q9BYR6 98 aa10.7□□□□□ -0.7
LINC00960-201ENST00000463183 KRTAP3-2Q9BYR7 98 aa10.7□□□□□ -0.7
LINC00960-201ENST00000463183 PLEKHB2Q96CS7 222 aa10.69□□□□□ -0.7
LINC00960-201ENST00000463183 A0A087X002 238 aa10.68□□□□□ -0.7
LINC00960-201ENST00000463183 M0R378 163 aa10.68□□□□□ -0.7
LINC00960-201ENST00000463183 JOSD1Q15040 202 aaPredicted RBP10.68□□□□□ -0.7
LINC00960-201ENST00000463183 KRTAP13-1Q8IUC0 172 aa10.68□□□□□ -0.7
LINC00960-201ENST00000463183 DAND5Q8N907 189 aa10.68□□□□□ -0.7
LINC00960-201ENST00000463183 E9PLD3 99 aa10.67□□□□□ -0.7
LINC00960-201ENST00000463183 SCGB1D1O95968 90 aa10.67□□□□□ -0.7
LINC00960-201ENST00000463183 LGALS3P17931 250 aaKnown RBP10.67□□□□□ -0.7
LINC00960-201ENST00000463183 ATOH7Q8N100 152 aa10.67□□□□□ -0.7
LINC00960-201ENST00000463183 J3QQQ9 107 aa10.66□□□□□ -0.7
LINC00960-201ENST00000463183 CRYGAP11844 174 aa10.66□□□□□ -0.7
LINC00960-201ENST00000463183 LINC00587B1AMM8 73 aa10.65□□□□□ -0.7
LINC00960-201ENST00000463183 TSPAN13O95857 204 aa10.65□□□□□ -0.7
LINC00960-201ENST00000463183 TYMSOSQ8TAI1 123 aa10.65□□□□□ -0.7
LINC00960-201ENST00000463183 HIGD2AQ9BW72 106 aa10.65□□□□□ -0.7
LINC00960-201ENST00000463183 LPAP08519 4548 aa10.64□□□□□ -0.71
LINC00960-201ENST00000463183 PYY3Q5JQD4 70 aa10.63□□□□□ -0.71
LINC00960-201ENST00000463183 IGKV2D-26A0A0A0MRZ7 120 aa10.62□□□□□ -0.71
LINC00960-201ENST00000463183 ANKRD39Q53RE8 183 aa10.62□□□□□ -0.71
LINC00960-201ENST00000463183 NPC2P61916 151 aa10.6□□□□□ -0.71
LINC00960-201ENST00000463183 PRR4Q16378 134 aa10.6□□□□□ -0.71
LINC00960-201ENST00000463183 TRBV10-3A0A0K0K1G6 114 aa10.59□□□□□ -0.71
LINC00960-201ENST00000463183 LOC105371267A0A1B0GV96 52 aa10.59□□□□□ -0.71
LINC00960-201ENST00000463183 NMUP48645 174 aa10.59□□□□□ -0.71
LINC00960-201ENST00000463183 MIEN1Q9BRT3 115 aa10.59□□□□□ -0.71
LINC00960-201ENST00000463183 PRYO14603 147 aa10.58□□□□□ -0.71
LINC00960-201ENST00000463183 KRTAP13-2Q52LG2 175 aa10.58□□□□□ -0.71
LINC00960-201ENST00000463183 RNF213Q63HN8 5207 aa10.58□□□□□ -0.72
LINC00960-201ENST00000463183 HSBP1L1C9JCN9 74 aa10.58□□□□□ -0.72
LINC00960-201ENST00000463183 ETDCA0A1B0GVM5 59 aa10.57□□□□□ -0.72
LINC00960-201ENST00000463183 FAM229BQ4G0N7 80 aa10.56□□□□□ -0.72
LINC00960-201ENST00000463183 A0A0J9YXY3 114 aa10.55□□□□□ -0.72
LINC00960-201ENST00000463183 S100A12P80511 92 aa10.55□□□□□ -0.72
LINC00960-201ENST00000463183 TTTY13Q9BZ97 58 aa10.55□□□□□ -0.72
LINC00960-201ENST00000463183 DDTP30046 118 aa10.54□□□□□ -0.72
LINC00960-201ENST00000463183 KCNQ1DNQ9H478 68 aa10.54□□□□□ -0.72
LINC00960-201ENST00000463183 PCP2Q8IVA1 136 aa10.53□□□□□ -0.72
LINC00960-201ENST00000463183 ZNF815PA8K554 130 aa10.52□□□□□ -0.73
LINC00960-201ENST00000463183 S100A7L2Q5SY68 101 aa10.52□□□□□ -0.73
LINC00960-201ENST00000463183 ADAMTSL4-AS1Q5T5F5 129 aa10.52□□□□□ -0.73
LINC00960-201ENST00000463183 C3orf22Q8N5N4 141 aa10.52□□□□□ -0.73
LINC00960-201ENST00000463183 LINC00337Q8N6G1 96 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms