RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 H7C423 109 aa9.74□□□□□ -0.85
SND1-203ENST00000463020 UBE2L6O14933 153 aa9.74□□□□□ -0.85
SND1-203ENST00000463020 TSPEAR-AS2P59090 65 aa9.74□□□□□ -0.85
SND1-203ENST00000463020 TMEM101Q96IK0 257 aa9.74□□□□□ -0.85
SND1-203ENST00000463020 TMEM243Q9BU79 118 aa9.74□□□□□ -0.85
SND1-203ENST00000463020 CSDC2Q9Y534 153 aaKnown RBP9.74□□□□□ -0.85
SND1-203ENST00000463020 SPCS1Q9Y6A9 102 aa9.74□□□□□ -0.85
SND1-203ENST00000463020 A0A1B0GUV1 79 aa9.73□□□□□ -0.85
SND1-203ENST00000463020 K7ERJ3 54 aa9.73□□□□□ -0.85
SND1-203ENST00000463020 UBE2D1P51668 147 aa9.73□□□□□ -0.85
SND1-203ENST00000463020 FAM104AQ969W3 186 aa9.73□□□□□ -0.85
SND1-203ENST00000463020 IGHV1-58A0A0C4DH39 117 aa9.72□□□□□ -0.85
SND1-203ENST00000463020 IGKV3OR2-268A0A0C4DH90 116 aa9.72□□□□□ -0.85
SND1-203ENST00000463020 TMEM238C9JI98 176 aa9.72□□□□□ -0.85
SND1-203ENST00000463020 HERVK_113P63121 156 aa9.72□□□□□ -0.85
SND1-203ENST00000463020 RNASE13Q5GAN3 156 aaKnown RBP9.72□□□□□ -0.85
SND1-203ENST00000463020 NAA38Q9BRA0 125 aaKnown RBP9.72□□□□□ -0.85
SND1-203ENST00000463020 RPL24P83731 157 aaKnown RBP9.69□□□□□ -0.86
SND1-203ENST00000463020 LYRM7Q5U5X0 104 aa9.69□□□□□ -0.86
SND1-203ENST00000463020 SPINK6Q6UWN8 80 aa9.69□□□□□ -0.86
SND1-203ENST00000463020 FAM19A3Q7Z5A8 133 aa9.69□□□□□ -0.86
SND1-203ENST00000463020 LINC00526Q96FQ7 95 aa9.69□□□□□ -0.86
SND1-203ENST00000463020 IGLV5-45A0A087WSX0 123 aa9.68□□□□□ -0.86
SND1-203ENST00000463020 GVQW2A0A096LPI5 108 aaPredicted RBP9.67□□□□□ -0.86
SND1-203ENST00000463020 A0A0J9YXY3 114 aa9.67□□□□□ -0.86
SND1-203ENST00000463020 SPINK8P0C7L1 97 aa9.67□□□□□ -0.86
SND1-203ENST00000463020 CHCHD10Q8WYQ3 142 aaPredicted RBP9.67□□□□□ -0.86
SND1-203ENST00000463020 CDC42SE2Q9NRR3 84 aa9.67□□□□□ -0.86
SND1-203ENST00000463020 NDUFA12Q9UI09 145 aa9.67□□□□□ -0.86
SND1-203ENST00000463020 FOXI1Q12951 378 aa9.66□□□□□ -0.86
SND1-203ENST00000463020 TIMM17BO60830 172 aa9.65□□□□□ -0.86
SND1-203ENST00000463020 APOMO95445 188 aa9.65□□□□□ -0.86
SND1-203ENST00000463020 LINC00242Q5T6M2 205 aa9.65□□□□□ -0.86
SND1-203ENST00000463020 REG3GQ6UW15 175 aa9.65□□□□□ -0.86
SND1-203ENST00000463020 CDKN2A-AS1Q9UH64 79 aa9.65□□□□□ -0.86
SND1-203ENST00000463020 TRAV13-1A0A0B4J241 112 aa9.64□□□□□ -0.87
SND1-203ENST00000463020 CFAP161Q6P656 301 aa9.64□□□□□ -0.87
SND1-203ENST00000463020 SPANXDQ9BXN6 97 aa9.64□□□□□ -0.87
SND1-203ENST00000463020 SPANXCQ9NY87 97 aa9.64□□□□□ -0.87
SND1-203ENST00000463020 NDUFA1O15239 70 aa9.63□□□□□ -0.87
SND1-203ENST00000463020 MUSTN1Q8IVN3 82 aa9.62□□□□□ -0.87
SND1-203ENST00000463020 COPS9Q8WXC6 57 aa9.62□□□□□ -0.87
SND1-203ENST00000463020 PRO1854Q9UHT4 67 aa9.62□□□□□ -0.87
SND1-203ENST00000463020 A0A0B4J2C4 111 aa9.61□□□□□ -0.87
SND1-203ENST00000463020 IGLV5-39A0A0G2JS06 123 aa9.61□□□□□ -0.87
SND1-203ENST00000463020 A4D1N5 150 aa9.61□□□□□ -0.87
SND1-203ENST00000463020 K7ERU9 68 aa9.61□□□□□ -0.87
SND1-203ENST00000463020 CFC1BP0CG36 223 aa9.61□□□□□ -0.87
SND1-203ENST00000463020 CFC1P0CG37 223 aa9.61□□□□□ -0.87
SND1-203ENST00000463020 IFITM1P13164 125 aa9.61□□□□□ -0.87
SND1-203ENST00000463020 Q6ZRP5 223 aa9.61□□□□□ -0.87
SND1-203ENST00000463020 TSPAN13O95857 204 aa9.6□□□□□ -0.87
SND1-203ENST00000463020 PRSS2P07478 247 aa9.6□□□□□ -0.87
SND1-203ENST00000463020 XCL1P47992 114 aa9.6□□□□□ -0.87
SND1-203ENST00000463020 LOC107984156A0A0G2JMH3 177 aa9.59□□□□□ -0.87
SND1-203ENST00000463020 A0A1W2PNN7 141 aa9.59□□□□□ -0.87
SND1-203ENST00000463020 F8W1H4 67 aa9.59□□□□□ -0.87
SND1-203ENST00000463020 HERV-K104P63124 156 aa9.59□□□□□ -0.87
SND1-203ENST00000463020 OCIAD2Q56VL3 154 aa9.59□□□□□ -0.87
SND1-203ENST00000463020 ARL17AQ8IVW1 177 aa9.59□□□□□ -0.87
SND1-203ENST00000463020 ERG28Q9UKR5 140 aa9.59□□□□□ -0.87
SND1-203ENST00000463020 SMIM1B2RUZ4 78 aa9.58□□□□□ -0.88
SND1-203ENST00000463020 CARD19Q96LW7 228 aa9.58□□□□□ -0.88
SND1-203ENST00000463020 LITAFQ99732 161 aa9.58□□□□□ -0.88
SND1-203ENST00000463020 TRBV20-1A0A075B6N2 111 aa9.57□□□□□ -0.88
SND1-203ENST00000463020 SCGB1C2P0DMR2 95 aa9.57□□□□□ -0.88
SND1-203ENST00000463020 FAT4Q6V0I7 4981 aa9.56□□□□□ -0.88
SND1-203ENST00000463020 PSMB2P49721 201 aa9.56□□□□□ -0.88
SND1-203ENST00000463020 KRTAP9-2Q9BYQ4 174 aa9.56□□□□□ -0.88
SND1-203ENST00000463020 PSORS1C2Q9UIG4 136 aa9.56□□□□□ -0.88
SND1-203ENST00000463020 CBY1Q9Y3M2 126 aa9.56□□□□□ -0.88
SND1-203ENST00000463020 LINC00959A0A1B0GUT2 108 aa9.55□□□□□ -0.88
SND1-203ENST00000463020 Q1RN00 199 aa9.55□□□□□ -0.88
SND1-203ENST00000463020 PRR26Q8N8Z3 221 aa9.55□□□□□ -0.88
SND1-203ENST00000463020 LINC00474Q9P2X8 69 aa9.55□□□□□ -0.88
SND1-203ENST00000463020 H3BMG7 143 aa9.54□□□□□ -0.88
SND1-203ENST00000463020 SYCNQ0VAF6 134 aa9.54□□□□□ -0.88
SND1-203ENST00000463020 GAGE2BQ13066 116 aa9.54□□□□□ -0.88
SND1-203ENST00000463020 SS18Q15532 418 aa9.54□□□□□ -0.88
SND1-203ENST00000463020 MEIG1Q5JSS6 88 aa9.54□□□□□ -0.88
SND1-203ENST00000463020 ADAMTSL4-AS1Q5T5F5 129 aa9.54□□□□□ -0.88
SND1-203ENST00000463020 SFTA2Q6UW10 78 aa9.53□□□□□ -0.88
SND1-203ENST00000463020 KRTAP11-1Q8IUC1 163 aa9.53□□□□□ -0.88
SND1-203ENST00000463020 COX7B2Q8TF08 81 aa9.53□□□□□ -0.88
SND1-203ENST00000463020 RNF151Q2KHN1 245 aa9.52□□□□□ -0.89
SND1-203ENST00000463020 PHF5AQ7RTV0 110 aaKnown RBP9.52□□□□□ -0.89
SND1-203ENST00000463020 ZNF625Q96I27 306 aaPredicted RBP9.52□□□□□ -0.89
SND1-203ENST00000463020 J3QR89 54 aa9.51□□□□□ -0.89
SND1-203ENST00000463020 LINC01561Q8N1V8 128 aa9.51□□□□□ -0.89
SND1-203ENST00000463020 PPDPFQ9H3Y8 114 aa9.51□□□□□ -0.89
SND1-203ENST00000463020 A0A087WZ39 114 aa9.5□□□□□ -0.89
SND1-203ENST00000463020 H7C2G1 150 aa9.5□□□□□ -0.89
SND1-203ENST00000463020 COX6CP09669 75 aa9.5□□□□□ -0.89
SND1-203ENST00000463020 LINC00308Q8TCZ7 52 aa9.5□□□□□ -0.89
SND1-203ENST00000463020 IGHV3OR16-9A0A0B4J2B5 98 aa9.49□□□□□ -0.89
SND1-203ENST00000463020 LOC107984640A0A0U1RRK4 108 aa9.49□□□□□ -0.89
SND1-203ENST00000463020 C9orf116Q5BN46 136 aaPredicted RBP9.49□□□□□ -0.89
SND1-203ENST00000463020 C1orf137Q5JT78 98 aa9.49□□□□□ -0.89
SND1-203ENST00000463020 VPS25Q9BRG1 176 aa9.49□□□□□ -0.89
SND1-203ENST00000463020 TOMM7Q9P0U1 55 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms