RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 PLEKHB2Q96CS7 222 aa5.05□□□□□ -1.6
GARNL3-212ENST00000463005 VAMP8Q9BV40 100 aa5.05□□□□□ -1.6
GARNL3-212ENST00000463005 PAM16Q9Y3D7 125 aa5.05□□□□□ -1.6
GARNL3-212ENST00000463005 IGLV5-45A0A087WSX0 123 aa5.04□□□□□ -1.6
GARNL3-212ENST00000463005 TMEM223A0PJW6 202 aa5.04□□□□□ -1.6
GARNL3-212ENST00000463005 PANO1I0J062 215 aa5.04□□□□□ -1.6
GARNL3-212ENST00000463005 NMUP48645 174 aa5.04□□□□□ -1.6
GARNL3-212ENST00000463005 HIGD2BQ4VC39 106 aa5.04□□□□□ -1.6
GARNL3-212ENST00000463005 C6orf226Q5I0X4 101 aa5.04□□□□□ -1.6
GARNL3-212ENST00000463005 COX7B2Q8TF08 81 aa5.04□□□□□ -1.6
GARNL3-212ENST00000463005 RNF213Q63HN8 5207 aa5.04□□□□□ -1.6
GARNL3-212ENST00000463005 A0A087WYN8 130 aa5.03□□□□□ -1.6
GARNL3-212ENST00000463005 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.03□□□□□ -1.6
GARNL3-212ENST00000463005 SMIM1B2RUZ4 78 aa5.03□□□□□ -1.6
GARNL3-212ENST00000463005 LEPROTO15243 131 aa5.03□□□□□ -1.6
GARNL3-212ENST00000463005 SMIM6P0DI80 62 aa5.03□□□□□ -1.6
GARNL3-212ENST00000463005 CXCL5P42830 114 aa5.03□□□□□ -1.6
GARNL3-212ENST00000463005 CNBPP62633 177 aaKnown RBP5.03□□□□□ -1.6
GARNL3-212ENST00000463005 C7orf33Q8WU49 177 aa5.03□□□□□ -1.6
GARNL3-212ENST00000463005 CAMK2N2Q96S95 79 aa5.03□□□□□ -1.6
GARNL3-212ENST00000463005 LOC105371267A0A1B0GV96 52 aa5.02□□□□□ -1.61
GARNL3-212ENST00000463005 NDUFA1O15239 70 aa5.02□□□□□ -1.61
GARNL3-212ENST00000463005 KRTAP10-8P60410 259 aa5.02□□□□□ -1.61
GARNL3-212ENST00000463005 SPATA45Q537H7 98 aa5.02□□□□□ -1.61
GARNL3-212ENST00000463005 PYY3Q5JQD4 70 aa5.02□□□□□ -1.61
GARNL3-212ENST00000463005 SFTA2Q6UW10 78 aa5.02□□□□□ -1.61
GARNL3-212ENST00000463005 Q8IZM0 81 aa5.02□□□□□ -1.61
GARNL3-212ENST00000463005 STPG4Q8N801 248 aa5.02□□□□□ -1.61
GARNL3-212ENST00000463005 TNXBP22105 4242 aa5.01□□□□□ -1.61
GARNL3-212ENST00000463005 GVQW2A0A096LPI5 108 aaPredicted RBP5.01□□□□□ -1.61
GARNL3-212ENST00000463005 MYMXA0A1B0GTQ4 84 aa5.01□□□□□ -1.61
GARNL3-212ENST00000463005 E9PLD3 99 aa5.01□□□□□ -1.61
GARNL3-212ENST00000463005 J3QQQ9 107 aa5.01□□□□□ -1.61
GARNL3-212ENST00000463005 MEIG1Q5JSS6 88 aa5.01□□□□□ -1.61
GARNL3-212ENST00000463005 KRTAP26-1Q6PEX3 210 aa5.01□□□□□ -1.61
GARNL3-212ENST00000463005 C15orf56Q8N910 161 aa5.01□□□□□ -1.61
GARNL3-212ENST00000463005 PLAC8Q9NZF1 115 aa5.01□□□□□ -1.61
GARNL3-212ENST00000463005 PKIGQ9Y2B9 76 aa5.01□□□□□ -1.61
GARNL3-212ENST00000463005 ZNF815PA8K554 130 aa5□□□□□ -1.61
GARNL3-212ENST00000463005 F8WDY8 70 aa5□□□□□ -1.61
GARNL3-212ENST00000463005 SYCNQ0VAF6 134 aa5□□□□□ -1.61
GARNL3-212ENST00000463005 UBE2V1Q13404 147 aa5□□□□□ -1.61
GARNL3-212ENST00000463005 REG3GQ6UW15 175 aa5□□□□□ -1.61
GARNL3-212ENST00000463005 SPINK6Q6UWN8 80 aa5□□□□□ -1.61
GARNL3-212ENST00000463005 SCGB1D4Q6XE38 83 aa5□□□□□ -1.61
GARNL3-212ENST00000463005 SPACA4Q8TDM5 124 aa5□□□□□ -1.61
GARNL3-212ENST00000463005 LINC00526Q96FQ7 95 aa5□□□□□ -1.61
GARNL3-212ENST00000463005 C2orf48Q96LS8 159 aa5□□□□□ -1.61
GARNL3-212ENST00000463005 CARD19Q96LW7 228 aa5□□□□□ -1.61
GARNL3-212ENST00000463005 NDUFA12Q9UI09 145 aa5□□□□□ -1.61
GARNL3-212ENST00000463005 HERV-K104P63124 156 aa4.99□□□□□ -1.61
GARNL3-212ENST00000463005 MAJINQ3KP22 176 aa4.99□□□□□ -1.61
GARNL3-212ENST00000463005 KRTAP4-11Q9BYQ6 195 aa4.99□□□□□ -1.61
GARNL3-212ENST00000463005 LINC00587B1AMM8 73 aa4.98□□□□□ -1.61
GARNL3-212ENST00000463005 C2orf82Q6UX34 121 aa4.98□□□□□ -1.61
GARNL3-212ENST00000463005 ZNF625Q96I27 306 aaPredicted RBP4.98□□□□□ -1.61
GARNL3-212ENST00000463005 C12orf57Q99622 126 aa4.98□□□□□ -1.61
GARNL3-212ENST00000463005 IGKV2D-26A0A0A0MRZ7 120 aa4.97□□□□□ -1.61
GARNL3-212ENST00000463005 TRBV30A0A0K0K1B3 111 aa4.97□□□□□ -1.61
GARNL3-212ENST00000463005 CHTF8P0CG12 524 aa4.97□□□□□ -1.61
GARNL3-212ENST00000463005 LINC00158P58513 81 aa4.97□□□□□ -1.61
GARNL3-212ENST00000463005 TSPEAR-AS2P59090 65 aa4.97□□□□□ -1.61
GARNL3-212ENST00000463005 SEC61BP60468 96 aaKnown RBP4.97□□□□□ -1.61
GARNL3-212ENST00000463005 PRR3P79522 188 aaKnown RBP4.97□□□□□ -1.61
GARNL3-212ENST00000463005 RPL18AQ02543 176 aaKnown RBP4.97□□□□□ -1.61
GARNL3-212ENST00000463005 SLC25A34Q6PIV7 304 aa4.97□□□□□ -1.61
GARNL3-212ENST00000463005 TMEM238C9JI98 176 aa4.96□□□□□ -1.62
GARNL3-212ENST00000463005 TSTD3H0UI37 97 aa4.96□□□□□ -1.62
GARNL3-212ENST00000463005 COX8AP10176 69 aa4.96□□□□□ -1.62
GARNL3-212ENST00000463005 PFN2P35080 140 aa4.96□□□□□ -1.62
GARNL3-212ENST00000463005 KIAA0087Q14695 138 aa4.96□□□□□ -1.62
GARNL3-212ENST00000463005 UNQ6190/PRO20217Q6UXQ8 127 aa4.96□□□□□ -1.62
GARNL3-212ENST00000463005 C14orf144Q96I85 54 aa4.96□□□□□ -1.62
GARNL3-212ENST00000463005 MIEN1Q9BRT3 115 aa4.96□□□□□ -1.62
GARNL3-212ENST00000463005 ERG28Q9UKR5 140 aa4.96□□□□□ -1.62
GARNL3-212ENST00000463005 A0A0U1RRA0 63 aa4.95□□□□□ -1.62
GARNL3-212ENST00000463005 LOC107984640A0A0U1RRK4 108 aa4.95□□□□□ -1.62
GARNL3-212ENST00000463005 SRSF9Q13242 221 aaKnown RBP eCLIP4.95□□□□□ -1.62
GARNL3-212ENST00000463005 PCP2Q8IVA1 136 aa4.95□□□□□ -1.62
GARNL3-212ENST00000463005 COPS9Q8WXC6 57 aa4.95□□□□□ -1.62
GARNL3-212ENST00000463005 TTTY13Q9BZ97 58 aa4.95□□□□□ -1.62
GARNL3-212ENST00000463005 UQCR10Q9UDW1 63 aa4.95□□□□□ -1.62
GARNL3-212ENST00000463005 A0A0J9YXY3 114 aa4.94□□□□□ -1.62
GARNL3-212ENST00000463005 SMIM13P0DJ93 91 aa4.94□□□□□ -1.62
GARNL3-212ENST00000463005 COX17Q14061 63 aa4.94□□□□□ -1.62
GARNL3-212ENST00000463005 PRO1933Q9H354 126 aa4.94□□□□□ -1.62
GARNL3-212ENST00000463005 LINC00474Q9P2X8 69 aa4.94□□□□□ -1.62
GARNL3-212ENST00000463005 C6orf48Q9UBA6 75 aa4.94□□□□□ -1.62
GARNL3-212ENST00000463005 GAGE2BQ13066 116 aa4.93□□□□□ -1.62
GARNL3-212ENST00000463005 GAGE2EQ4V326 116 aa4.93□□□□□ -1.62
GARNL3-212ENST00000463005 C9orf116Q5BN46 136 aaPredicted RBP4.93□□□□□ -1.62
GARNL3-212ENST00000463005 Q6ZRP5 223 aa4.93□□□□□ -1.62
GARNL3-212ENST00000463005 BOD1L2Q8IYS8 172 aa4.93□□□□□ -1.62
GARNL3-212ENST00000463005 GAGE2DQ9UEU5 116 aa4.93□□□□□ -1.62
GARNL3-212ENST00000463005 IGKV2-24A0A0C4DH68 120 aa4.92□□□□□ -1.62
GARNL3-212ENST00000463005 A0A0U1RQV1 116 aa4.92□□□□□ -1.62
GARNL3-212ENST00000463005 NDUFC2-KCTD14E9PQ53 114 aa4.92□□□□□ -1.62
GARNL3-212ENST00000463005 DLEU1O43261 78 aa4.92□□□□□ -1.62
GARNL3-212ENST00000463005 TIMM17BO60830 172 aa4.92□□□□□ -1.62
GARNL3-212ENST00000463005 IGKV2-30P06310 120 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms