RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 OXTP01178 125 aa2.36□□□□□ -2.03
COL8A1-204ENST00000462604 KRTAP10-3P60369 221 aa2.36□□□□□ -2.03
COL8A1-204ENST00000462604 KLKP1Q107X0 134 aa2.36□□□□□ -2.03
COL8A1-204ENST00000462604 XAGE1AQ9HD64 81 aa2.36□□□□□ -2.03
COL8A1-204ENST00000462604 SPTAN1Q13813 2472 aaKnown RBP2.36□□□□□ -2.03
COL8A1-204ENST00000462604 SPTBN1Q01082 2364 aaKnown RBP2.36□□□□□ -2.03
COL8A1-204ENST00000462604 CREBBPQ92793 2442 aa2.36□□□□□ -2.03
COL8A1-204ENST00000462604 ZFHX3Q15911 3703 aa2.35□□□□□ -2.03
COL8A1-204ENST00000462604 ANK3Q12955 4377 aaKnown RBP2.35□□□□□ -2.03
COL8A1-204ENST00000462604 PKD1L2Q7Z442 2459 aa2.35□□□□□ -2.03
COL8A1-204ENST00000462604 ASH1LQ9NR48 2969 aaKnown RBP2.35□□□□□ -2.03
COL8A1-204ENST00000462604 PRRC2AP48634 2157 aaKnown RBP2.35□□□□□ -2.03
COL8A1-204ENST00000462604 TRAV10A0A0B4J240 114 aa2.35□□□□□ -2.03
COL8A1-204ENST00000462604 H3BNG1 76 aa2.35□□□□□ -2.03
COL8A1-204ENST00000462604 FAM229AH3BQW9 127 aa2.35□□□□□ -2.03
COL8A1-204ENST00000462604 H7BZZ5 65 aa2.35□□□□□ -2.03
COL8A1-204ENST00000462604 M0R2N4 97 aa2.35□□□□□ -2.03
COL8A1-204ENST00000462604 ERC2-IT1O76042 136 aa2.35□□□□□ -2.03
COL8A1-204ENST00000462604 NREPQ16612 68 aa2.35□□□□□ -2.03
COL8A1-204ENST00000462604 HIGD2BQ4VC39 106 aa2.35□□□□□ -2.03
COL8A1-204ENST00000462604 HRCT1Q6UXD1 115 aa2.35□□□□□ -2.03
COL8A1-204ENST00000462604 NKAPP1Q8N9T2 125 aa2.35□□□□□ -2.03
COL8A1-204ENST00000462604 NAV2Q8IVL1 2488 aa2.35□□□□□ -2.03
COL8A1-204ENST00000462604 SPG11Q96JI7 2443 aa2.34□□□□□ -2.03
COL8A1-204ENST00000462604 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.34□□□□□ -2.03
COL8A1-204ENST00000462604 FBN2P35556 2912 aa2.34□□□□□ -2.03
COL8A1-204ENST00000462604 SMIM26A0A096LP01 95 aa2.34□□□□□ -2.03
COL8A1-204ENST00000462604 EPM2AB3EWF7 344 aa2.34□□□□□ -2.03
COL8A1-204ENST00000462604 F8WEM9 126 aa2.34□□□□□ -2.03
COL8A1-204ENST00000462604 BPY2O14599 106 aa2.34□□□□□ -2.03
COL8A1-204ENST00000462604 FUSP35637 526 aaKnown RBP eCLIP2.34□□□□□ -2.03
COL8A1-204ENST00000462604 C4orf26Q17RF5 130 aa2.34□□□□□ -2.03
COL8A1-204ENST00000462604 Q5XG85 94 aa2.34□□□□□ -2.03
COL8A1-204ENST00000462604 Q6ZRU5 148 aa2.34□□□□□ -2.03
COL8A1-204ENST00000462604 SCXQ7RTU7 201 aa2.34□□□□□ -2.03
COL8A1-204ENST00000462604 RMI2Q96E14 147 aa2.34□□□□□ -2.03
COL8A1-204ENST00000462604 DHRS4-AS1Q9P1J3 65 aa2.34□□□□□ -2.03
COL8A1-204ENST00000462604 SNURFQ9Y675 71 aa2.34□□□□□ -2.03
COL8A1-204ENST00000462604 CFAP46Q8IYW2 2715 aa2.34□□□□□ -2.03
COL8A1-204ENST00000462604 CHD8Q9HCK8 2581 aa2.34□□□□□ -2.04
COL8A1-204ENST00000462604 NACAE9PAV3 2078 aa2.33□□□□□ -2.04
COL8A1-204ENST00000462604 COL12A1Q99715 3063 aa2.33□□□□□ -2.04
COL8A1-204ENST00000462604 USP9XQ93008 2570 aaPredicted RBP2.33□□□□□ -2.04
COL8A1-204ENST00000462604 NBPF19A0A087WUL8 3843 aa2.33□□□□□ -2.04
COL8A1-204ENST00000462604 A0A1B0GW54 56 aa2.33□□□□□ -2.04
COL8A1-204ENST00000462604 J3QKU1 62 aa2.33□□□□□ -2.04
COL8A1-204ENST00000462604 IGKV4-1P06312 121 aa2.33□□□□□ -2.04
COL8A1-204ENST00000462604 SYCNQ0VAF6 134 aa2.33□□□□□ -2.04
COL8A1-204ENST00000462604 KPRPQ5T749 579 aaPredicted RBP2.33□□□□□ -2.04
COL8A1-204ENST00000462604 WFDC10BQ8IUB3 73 aa2.33□□□□□ -2.04
COL8A1-204ENST00000462604 C15orf56Q8N910 161 aa2.33□□□□□ -2.04
COL8A1-204ENST00000462604 TMEM254Q8TBM7 123 aa2.33□□□□□ -2.04
COL8A1-204ENST00000462604 MRAPQ8TCY5 172 aa2.33□□□□□ -2.04
COL8A1-204ENST00000462604 IGKV2D-24A0A075B6R9 120 aa2.32□□□□□ -2.04
COL8A1-204ENST00000462604 ETDCA0A1B0GVM5 59 aa2.32□□□□□ -2.04
COL8A1-204ENST00000462604 LINC01556Q5JQF7 62 aa2.32□□□□□ -2.04
COL8A1-204ENST00000462604 KRTAP26-1Q6PEX3 210 aa2.32□□□□□ -2.04
COL8A1-204ENST00000462604 Q6ZRP5 223 aa2.32□□□□□ -2.04
COL8A1-204ENST00000462604 C7orf33Q8WU49 177 aa2.32□□□□□ -2.04
COL8A1-204ENST00000462604 SMR3AQ99954 134 aa2.32□□□□□ -2.04
COL8A1-204ENST00000462604 TM2D3Q9BRN9 247 aa2.32□□□□□ -2.04
COL8A1-204ENST00000462604 KCNQ1DNQ9H478 68 aa2.32□□□□□ -2.04
COL8A1-204ENST00000462604 UBR5O95071 2799 aaPredicted RBP2.32□□□□□ -2.04
COL8A1-204ENST00000462604 CACNA1AO00555 2505 aa2.31□□□□□ -2.04
COL8A1-204ENST00000462604 PIEZO1Q92508 2521 aa2.31□□□□□ -2.04
COL8A1-204ENST00000462604 ZNF462Q96JM2 2506 aa2.31□□□□□ -2.04
COL8A1-204ENST00000462604 IGLV5-37A0A075B6J1 123 aa2.31□□□□□ -2.04
COL8A1-204ENST00000462604 A0A0U1RQV1 116 aa2.31□□□□□ -2.04
COL8A1-204ENST00000462604 C3orf84H3BNL1 204 aa2.31□□□□□ -2.04
COL8A1-204ENST00000462604 Q6ZTC4 211 aa2.31□□□□□ -2.04
COL8A1-204ENST00000462604 Q8N9L7 120 aa2.31□□□□□ -2.04
COL8A1-204ENST00000462604 DEFB105AQ8NG35 78 aa2.31□□□□□ -2.04
COL8A1-204ENST00000462604 RETNQ9HD89 108 aa2.31□□□□□ -2.04
COL8A1-204ENST00000462604 PRO0628Q9UI54 55 aa2.31□□□□□ -2.04
COL8A1-204ENST00000462604 IGSF10Q6WRI0 2623 aa2.31□□□□□ -2.04
COL8A1-204ENST00000462604 ACACBO00763 2458 aa2.3□□□□□ -2.04
COL8A1-204ENST00000462604 USP9YO00507 2555 aaPredicted RBP2.3□□□□□ -2.04
COL8A1-204ENST00000462604 POLQO75417 2590 aa2.3□□□□□ -2.04
COL8A1-204ENST00000462604 IGLV5-48A0A075B6I7 105 aa2.3□□□□□ -2.04
COL8A1-204ENST00000462604 INAFM1C9JVW0 142 aa2.3□□□□□ -2.04
COL8A1-204ENST00000462604 TLX1NBP0CAT3 122 aa2.3□□□□□ -2.04
COL8A1-204ENST00000462604 ESRGQ1W209 222 aa2.3□□□□□ -2.04
COL8A1-204ENST00000462604 C1orf137Q5JT78 98 aa2.3□□□□□ -2.04
COL8A1-204ENST00000462604 Q6ZRX8 168 aa2.3□□□□□ -2.04
COL8A1-204ENST00000462604 Q8N377 158 aa2.3□□□□□ -2.04
COL8A1-204ENST00000462604 Q8NBF4 154 aa2.3□□□□□ -2.04
COL8A1-204ENST00000462604 OCR1Q9BZK8 76 aa2.3□□□□□ -2.04
COL8A1-204ENST00000462604 CSPG4Q6UVK1 2322 aa2.3□□□□□ -2.04
COL8A1-204ENST00000462604 MYO18BQ8IUG5 2567 aa2.3□□□□□ -2.04
COL8A1-204ENST00000462604 FLNCQ14315 2725 aa2.29□□□□□ -2.04
COL8A1-204ENST00000462604 CR1P17927 2039 aa2.29□□□□□ -2.04
COL8A1-204ENST00000462604 IGLV1-50A0A075B6I6 118 aa2.29□□□□□ -2.04
COL8A1-204ENST00000462604 DEFB131BA0A096LNP1 70 aa2.29□□□□□ -2.04
COL8A1-204ENST00000462604 Q75L30 129 aa2.29□□□□□ -2.04
COL8A1-204ENST00000462604 SMIM29Q86T20 159 aa2.29□□□□□ -2.04
COL8A1-204ENST00000462604 C11orf45Q8TAV5 145 aa2.29□□□□□ -2.04
COL8A1-204ENST00000462604 CELSR2Q9HCU4 2923 aa2.29□□□□□ -2.04
COL8A1-204ENST00000462604 ANKRD17O75179 2603 aaKnown RBP2.28□□□□□ -2.04
COL8A1-204ENST00000462604 EPG5Q9HCE0 2579 aa2.28□□□□□ -2.04
COL8A1-204ENST00000462604 MYO9AB2RTY4 2548 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms