RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 CDKN2A-AS1Q9UH64 79 aa5.46□□□□□ -1.54
LDB1-203ENST00000461873 TINCRA0A1B0GVN0 87 aa5.45□□□□□ -1.54
LDB1-203ENST00000461873 LINC01545Q5VT33 79 aa5.45□□□□□ -1.54
LDB1-203ENST00000461873 FAM19A3Q7Z5A8 133 aa5.45□□□□□ -1.54
LDB1-203ENST00000461873 COX7B2Q8TF08 81 aa5.45□□□□□ -1.54
LDB1-203ENST00000461873 TRAV12-1A0A0B4J245 112 aa5.44□□□□□ -1.54
LDB1-203ENST00000461873 C11orf86A6NJI1 115 aa5.44□□□□□ -1.54
LDB1-203ENST00000461873 H0Y9J4 135 aa5.44□□□□□ -1.54
LDB1-203ENST00000461873 XAGE1AQ9HD64 81 aa5.44□□□□□ -1.54
LDB1-203ENST00000461873 C20orf202A1L168 122 aa5.43□□□□□ -1.54
LDB1-203ENST00000461873 DPM2O94777 84 aa5.43□□□□□ -1.54
LDB1-203ENST00000461873 IGKCP01834 107 aa5.43□□□□□ -1.54
LDB1-203ENST00000461873 RPL13AP40429 203 aaKnown RBP5.43□□□□□ -1.54
LDB1-203ENST00000461873 NKAPP1Q8N9T2 125 aa5.43□□□□□ -1.54
LDB1-203ENST00000461873 C12orf57Q99622 126 aa5.43□□□□□ -1.54
LDB1-203ENST00000461873 C22orf24Q9Y442 160 aa5.43□□□□□ -1.54
LDB1-203ENST00000461873 UBR4Q5T4S7 5183 aa5.43□□□□□ -1.54
LDB1-203ENST00000461873 KRTAP10-8P60410 259 aa5.42□□□□□ -1.54
LDB1-203ENST00000461873 C9orf129Q5T035 196 aaKnown RBP5.42□□□□□ -1.54
LDB1-203ENST00000461873 TMEM170BQ5T4T1 132 aa5.42□□□□□ -1.54
LDB1-203ENST00000461873 LINC00518Q8N0U6 118 aa5.42□□□□□ -1.54
LDB1-203ENST00000461873 PRO1933Q9H354 126 aa5.42□□□□□ -1.54
LDB1-203ENST00000461873 PAM16Q9Y3D7 125 aa5.42□□□□□ -1.54
LDB1-203ENST00000461873 IGLV1-50A0A075B6I6 118 aa5.41□□□□□ -1.54
LDB1-203ENST00000461873 SPINK8P0C7L1 97 aa5.41□□□□□ -1.54
LDB1-203ENST00000461873 RPL28P46779 137 aaKnown RBP5.41□□□□□ -1.54
LDB1-203ENST00000461873 ANKRD39Q53RE8 183 aa5.41□□□□□ -1.54
LDB1-203ENST00000461873 MRPL55Q7Z7F7 128 aaKnown RBP5.41□□□□□ -1.54
LDB1-203ENST00000461873 TNXBP22105 4242 aa5.41□□□□□ -1.54
LDB1-203ENST00000461873 SMIM1B2RUZ4 78 aa5.4□□□□□ -1.54
LDB1-203ENST00000461873 ZNF861PO60384 105 aa5.4□□□□□ -1.54
LDB1-203ENST00000461873 SMIM6P0DI80 62 aa5.4□□□□□ -1.54
LDB1-203ENST00000461873 IGLC3P0DOY3 106 aa5.4□□□□□ -1.54
LDB1-203ENST00000461873 ZNF22P17026 224 aaPredicted RBP5.4□□□□□ -1.54
LDB1-203ENST00000461873 SPATA45Q537H7 98 aa5.4□□□□□ -1.54
LDB1-203ENST00000461873 SFTA2Q6UW10 78 aa5.4□□□□□ -1.54
LDB1-203ENST00000461873 PRR26Q8N8Z3 221 aa5.4□□□□□ -1.54
LDB1-203ENST00000461873 VAMP8Q9BV40 100 aa5.4□□□□□ -1.54
LDB1-203ENST00000461873 TP73-AS1Q9UF72 201 aa5.4□□□□□ -1.54
LDB1-203ENST00000461873 IGKV2D-26A0A0A0MRZ7 120 aa5.39□□□□□ -1.55
LDB1-203ENST00000461873 PFN2P35080 140 aa5.39□□□□□ -1.55
LDB1-203ENST00000461873 UBE2AP49459 152 aa5.39□□□□□ -1.55
LDB1-203ENST00000461873 RPL24P83731 157 aaKnown RBP5.39□□□□□ -1.55
LDB1-203ENST00000461873 TTTY13Q9BZ97 58 aa5.39□□□□□ -1.55
LDB1-203ENST00000461873 IGLV5-45A0A087WSX0 123 aa5.38□□□□□ -1.55
LDB1-203ENST00000461873 GAGE10A6NGK3 116 aa5.38□□□□□ -1.55
LDB1-203ENST00000461873 RPL37AP8A6NKH3 93 aa5.38□□□□□ -1.55
LDB1-203ENST00000461873 BCE1O60756 84 aa5.38□□□□□ -1.55
LDB1-203ENST00000461873 PLNP26678 52 aa5.38□□□□□ -1.55
LDB1-203ENST00000461873 S100A12P80511 92 aa5.38□□□□□ -1.55
LDB1-203ENST00000461873 C14orf144Q96I85 54 aa5.38□□□□□ -1.55
LDB1-203ENST00000461873 TMEM223A0PJW6 202 aa5.37□□□□□ -1.55
LDB1-203ENST00000461873 HSBP1L1C9JCN9 74 aa5.37□□□□□ -1.55
LDB1-203ENST00000461873 NMUP48645 174 aa5.37□□□□□ -1.55
LDB1-203ENST00000461873 COX17Q14061 63 aa5.36□□□□□ -1.55
LDB1-203ENST00000461873 KRTAP11-1Q8IUC1 163 aa5.36□□□□□ -1.55
LDB1-203ENST00000461873 PCP2Q8IVA1 136 aa5.36□□□□□ -1.55
LDB1-203ENST00000461873 LINC00167Q96N53 147 aa5.36□□□□□ -1.55
LDB1-203ENST00000461873 PCP4L1A6NKN8 68 aa5.35□□□□□ -1.55
LDB1-203ENST00000461873 CRYGAP11844 174 aa5.35□□□□□ -1.55
LDB1-203ENST00000461873 LINC00158P58513 81 aa5.35□□□□□ -1.55
LDB1-203ENST00000461873 TSPEAR-AS2P59090 65 aa5.35□□□□□ -1.55
LDB1-203ENST00000461873 PRR4Q16378 134 aa5.35□□□□□ -1.55
LDB1-203ENST00000461873 KRTAP7-1Q8IUC3 87 aa5.35□□□□□ -1.55
LDB1-203ENST00000461873 ERG28Q9UKR5 140 aa5.35□□□□□ -1.55
LDB1-203ENST00000461873 IGKV2-28A0A075B6P5 120 aa5.34□□□□□ -1.55
LDB1-203ENST00000461873 E9PLD3 99 aa5.34□□□□□ -1.55
LDB1-203ENST00000461873 LEPROTO15243 131 aa5.34□□□□□ -1.55
LDB1-203ENST00000461873 IGKV2D-28P01615 120 aa5.34□□□□□ -1.55
LDB1-203ENST00000461873 HERVK_113P61574 105 aa5.34□□□□□ -1.55
LDB1-203ENST00000461873 TYMSOSQ8TAI1 123 aa5.34□□□□□ -1.55
LDB1-203ENST00000461873 ZNF625Q96I27 306 aaPredicted RBP5.34□□□□□ -1.55
LDB1-203ENST00000461873 LINC00587B1AMM8 73 aa5.33□□□□□ -1.56
LDB1-203ENST00000461873 J3QQQ9 107 aa5.33□□□□□ -1.56
LDB1-203ENST00000461873 MEIG1Q5JSS6 88 aa5.33□□□□□ -1.56
LDB1-203ENST00000461873 XP32Q5T750 250 aa5.33□□□□□ -1.56
LDB1-203ENST00000461873 FAM19A1Q7Z5A9 133 aa5.33□□□□□ -1.56
LDB1-203ENST00000461873 LRP2P98164 4655 aa5.32□□□□□ -1.56
LDB1-203ENST00000461873 IGLV5-37A0A075B6J1 123 aa5.32□□□□□ -1.56
LDB1-203ENST00000461873 COX8AP10176 69 aa5.32□□□□□ -1.56
LDB1-203ENST00000461873 LGALS3P17931 250 aaKnown RBP5.32□□□□□ -1.56
LDB1-203ENST00000461873 PLEKHB2Q96CS7 222 aa5.32□□□□□ -1.56
LDB1-203ENST00000461873 SND1-IT1Q9HBX3 110 aa5.32□□□□□ -1.56
LDB1-203ENST00000461873 IGLV5-39A0A0G2JS06 123 aa5.31□□□□□ -1.56
LDB1-203ENST00000461873 ZNF815PA8K554 130 aa5.31□□□□□ -1.56
LDB1-203ENST00000461873 TSPAN13O95857 204 aa5.31□□□□□ -1.56
LDB1-203ENST00000461873 KRTAP1-4P0C5Y4 121 aa5.31□□□□□ -1.56
LDB1-203ENST00000461873 A0A0U1RRA0 63 aa5.3□□□□□ -1.56
LDB1-203ENST00000461873 SLC25A34Q6PIV7 304 aa5.3□□□□□ -1.56
LDB1-203ENST00000461873 BOD1L2Q8IYS8 172 aa5.3□□□□□ -1.56
LDB1-203ENST00000461873 MIEN1Q9BRT3 115 aa5.3□□□□□ -1.56
LDB1-203ENST00000461873 NDUFA12Q9UI09 145 aa5.3□□□□□ -1.56
LDB1-203ENST00000461873 MYMXA0A1B0GTQ4 84 aa5.29□□□□□ -1.56
LDB1-203ENST00000461873 TSTD3H0UI37 97 aa5.29□□□□□ -1.56
LDB1-203ENST00000461873 HERV-K104P63124 156 aa5.29□□□□□ -1.56
LDB1-203ENST00000461873 TMEM126AQ9H061 195 aa5.29□□□□□ -1.56
LDB1-203ENST00000461873 UQCR10Q9UDW1 63 aa5.29□□□□□ -1.56
LDB1-203ENST00000461873 PRLHP81277 87 aa5.28□□□□□ -1.56
LDB1-203ENST00000461873 C2orf91Q6ZV80 131 aa5.28□□□□□ -1.56
LDB1-203ENST00000461873 HIGD2AQ9BW72 106 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms