RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 HIST1H2BBP33778 126 aa11.07□□□□□ -0.64
COL9A2-205ENST00000461118 HIST1H2BDP58876 126 aa11.07□□□□□ -0.64
COL9A2-205ENST00000461118 HIST1H2BCP62807 126 aa11.07□□□□□ -0.64
COL9A2-205ENST00000461118 RPL24P83731 157 aaKnown RBP11.07□□□□□ -0.64
COL9A2-205ENST00000461118 HIST2H2BEQ16778 126 aa11.07□□□□□ -0.64
COL9A2-205ENST00000461118 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.07□□□□□ -0.64
COL9A2-205ENST00000461118 HIST1H2BHQ93079 126 aa11.07□□□□□ -0.64
COL9A2-205ENST00000461118 HIST1H2BNQ99877 126 aa11.07□□□□□ -0.64
COL9A2-205ENST00000461118 HIST1H2BMQ99879 126 aa11.07□□□□□ -0.64
COL9A2-205ENST00000461118 KRTAP1-4P0C5Y4 121 aa11.06□□□□□ -0.64
COL9A2-205ENST00000461118 LINC00158P58513 81 aa11.06□□□□□ -0.64
COL9A2-205ENST00000461118 HERV-K104P63124 156 aa11.06□□□□□ -0.64
COL9A2-205ENST00000461118 MUC2Q02817 5179 aa11.04□□□□□ -0.64
COL9A2-205ENST00000461118 DPM2O94777 84 aa11.04□□□□□ -0.64
COL9A2-205ENST00000461118 RPL28P46779 137 aaKnown RBP11.04□□□□□ -0.64
COL9A2-205ENST00000461118 NDUFA12Q9UI09 145 aa11.04□□□□□ -0.64
COL9A2-205ENST00000461118 IGLV1-50A0A075B6I6 118 aa11.03□□□□□ -0.64
COL9A2-205ENST00000461118 LINC00587B1AMM8 73 aa11.03□□□□□ -0.64
COL9A2-205ENST00000461118 Q8NDZ9 215 aa11.03□□□□□ -0.64
COL9A2-205ENST00000461118 MAP1LC3CQ9BXW4 147 aa11.03□□□□□ -0.64
COL9A2-205ENST00000461118 MYMXA0A1B0GTQ4 84 aa11.02□□□□□ -0.65
COL9A2-205ENST00000461118 LEPROTO15243 131 aa11.02□□□□□ -0.65
COL9A2-205ENST00000461118 SMIM13P0DJ93 91 aa11.02□□□□□ -0.65
COL9A2-205ENST00000461118 PRR26Q8N8Z3 221 aa11.02□□□□□ -0.65
COL9A2-205ENST00000461118 PLEKHB2Q96CS7 222 aa11.02□□□□□ -0.65
COL9A2-205ENST00000461118 IGKV2-28A0A075B6P5 120 aa11.01□□□□□ -0.65
COL9A2-205ENST00000461118 A0A0U1RRA0 63 aa11.01□□□□□ -0.65
COL9A2-205ENST00000461118 IGKV2D-28P01615 120 aa11.01□□□□□ -0.65
COL9A2-205ENST00000461118 IGKCP01834 107 aa11.01□□□□□ -0.65
COL9A2-205ENST00000461118 PMCHL2Q9BQD1 86 aa11.01□□□□□ -0.65
COL9A2-205ENST00000461118 ATP6V1G1O75348 118 aa11□□□□□ -0.65
COL9A2-205ENST00000461118 TSPEAR-AS2P59090 65 aa11□□□□□ -0.65
COL9A2-205ENST00000461118 MEIG1Q5JSS6 88 aa11□□□□□ -0.65
COL9A2-205ENST00000461118 KRTAP13-1Q8IUC0 172 aa11□□□□□ -0.65
COL9A2-205ENST00000461118 HERVK_113P61574 105 aa10.99□□□□□ -0.65
COL9A2-205ENST00000461118 MIR7-3HGQ8N6C7 128 aa10.99□□□□□ -0.65
COL9A2-205ENST00000461118 J3QQQ9 107 aa10.98□□□□□ -0.65
COL9A2-205ENST00000461118 SYS1-DBNDD2H3BUS1 97 aa10.97□□□□□ -0.65
COL9A2-205ENST00000461118 NMUP48645 174 aa10.97□□□□□ -0.65
COL9A2-205ENST00000461118 COA6Q5JTJ3 125 aaKnown RBP10.97□□□□□ -0.65
COL9A2-205ENST00000461118 TMEM126AQ9H061 195 aa10.97□□□□□ -0.65
COL9A2-205ENST00000461118 M0R378 163 aa10.96□□□□□ -0.65
COL9A2-205ENST00000461118 RPL13AP40429 203 aaKnown RBP10.96□□□□□ -0.65
COL9A2-205ENST00000461118 LOC107984156A0A0G2JMH3 177 aa10.95□□□□□ -0.66
COL9A2-205ENST00000461118 UBE2AP49459 152 aa10.95□□□□□ -0.66
COL9A2-205ENST00000461118 ARL17AQ8IVW1 177 aa10.95□□□□□ -0.66
COL9A2-205ENST00000461118 BOD1L2Q8IYS8 172 aa10.95□□□□□ -0.66
COL9A2-205ENST00000461118 TMEM238C9JI98 176 aa10.94□□□□□ -0.66
COL9A2-205ENST00000461118 LGALS3P17931 250 aaKnown RBP10.93□□□□□ -0.66
COL9A2-205ENST00000461118 LINC01545Q5VT33 79 aa10.93□□□□□ -0.66
COL9A2-205ENST00000461118 PET117Q6UWS5 81 aa10.93□□□□□ -0.66
COL9A2-205ENST00000461118 IGKV2D-26A0A0A0MRZ7 120 aa10.92□□□□□ -0.66
COL9A2-205ENST00000461118 E9PLD3 99 aa10.92□□□□□ -0.66
COL9A2-205ENST00000461118 FAM19A1Q7Z5A9 133 aa10.91□□□□□ -0.66
COL9A2-205ENST00000461118 PRLHP81277 87 aa10.89□□□□□ -0.67
COL9A2-205ENST00000461118 C3orf79P0CE67 100 aa10.88□□□□□ -0.67
COL9A2-205ENST00000461118 DAND5Q8N907 189 aa10.88□□□□□ -0.67
COL9A2-205ENST00000461118 KRTAP9-2Q9BYQ4 174 aa10.88□□□□□ -0.67
COL9A2-205ENST00000461118 A0A087X002 238 aa10.87□□□□□ -0.67
COL9A2-205ENST00000461118 CRYGAP11844 174 aa10.87□□□□□ -0.67
COL9A2-205ENST00000461118 KCNQ1DNQ9H478 68 aa10.87□□□□□ -0.67
COL9A2-205ENST00000461118 A0A0J9YXY3 114 aa10.86□□□□□ -0.67
COL9A2-205ENST00000461118 PRYO14603 147 aa10.86□□□□□ -0.67
COL9A2-205ENST00000461118 NCR3O14931 201 aa10.86□□□□□ -0.67
COL9A2-205ENST00000461118 S100A1P23297 94 aa10.86□□□□□ -0.67
COL9A2-205ENST00000461118 TRBV10-2A0A0K0K1G8 114 aa10.85□□□□□ -0.67
COL9A2-205ENST00000461118 SPRR1AP35321 89 aa10.85□□□□□ -0.67
COL9A2-205ENST00000461118 FAM229BQ4G0N7 80 aa10.85□□□□□ -0.67
COL9A2-205ENST00000461118 LINC00337Q8N6G1 96 aa10.84□□□□□ -0.67
COL9A2-205ENST00000461118 TRBV10-3A0A0K0K1G6 114 aa10.83□□□□□ -0.68
COL9A2-205ENST00000461118 NDUFC2O95298 119 aa10.83□□□□□ -0.68
COL9A2-205ENST00000461118 ADAMTSL4-AS1Q5T5F5 129 aa10.83□□□□□ -0.68
COL9A2-205ENST00000461118 MIEN1Q9BRT3 115 aa10.83□□□□□ -0.68
COL9A2-205ENST00000461118 ANAPC11Q9NYG5 84 aa10.83□□□□□ -0.68
COL9A2-205ENST00000461118 KRTAP4-16G5E9R7 235 aaPredicted RBP10.82□□□□□ -0.68
COL9A2-205ENST00000461118 KRTDAPP60985 99 aa10.82□□□□□ -0.68
COL9A2-205ENST00000461118 TYMSOSQ8TAI1 123 aa10.81□□□□□ -0.68
COL9A2-205ENST00000461118 SPANXB1Q9NS25 103 aaPredicted RBP10.81□□□□□ -0.68
COL9A2-205ENST00000461118 S100A12P80511 92 aa10.8□□□□□ -0.68
COL9A2-205ENST00000461118 KRTAP13-2Q52LG2 175 aa10.8□□□□□ -0.68
COL9A2-205ENST00000461118 SOSTDC1Q6X4U4 206 aa10.8□□□□□ -0.68
COL9A2-205ENST00000461118 HIGD2AQ9BW72 106 aa10.8□□□□□ -0.68
COL9A2-205ENST00000461118 FAT4Q6V0I7 4981 aa10.79□□□□□ -0.68
COL9A2-205ENST00000461118 EIF4EBP3O60516 100 aaPredicted RBP10.79□□□□□ -0.68
COL9A2-205ENST00000461118 TIMM17BO60830 172 aa10.79□□□□□ -0.68
COL9A2-205ENST00000461118 DDTP30046 118 aa10.79□□□□□ -0.68
COL9A2-205ENST00000461118 LITAFQ99732 161 aa10.79□□□□□ -0.68
COL9A2-205ENST00000461118 C20orf202A1L168 122 aa10.78□□□□□ -0.68
COL9A2-205ENST00000461118 ETDCA0A1B0GVM5 59 aa10.77□□□□□ -0.69
COL9A2-205ENST00000461118 IGLV6-57P01721 117 aa10.77□□□□□ -0.69
COL9A2-205ENST00000461118 ZNF815PA8K554 130 aa10.76□□□□□ -0.69
COL9A2-205ENST00000461118 AKR1D1P51857 326 aa10.76□□□□□ -0.69
COL9A2-205ENST00000461118 LCE2AQ5TA79 106 aaPredicted RBP10.76□□□□□ -0.69
COL9A2-205ENST00000461118 NPC2P61916 151 aa10.75□□□□□ -0.69
COL9A2-205ENST00000461118 LINC00308Q8TCZ7 52 aa10.75□□□□□ -0.69
COL9A2-205ENST00000461118 SPRR4Q96PI1 79 aa10.75□□□□□ -0.69
COL9A2-205ENST00000461118 TTTY13Q9BZ97 58 aa10.75□□□□□ -0.69
COL9A2-205ENST00000461118 B5MCH6 92 aa10.74□□□□□ -0.69
COL9A2-205ENST00000461118 PRR4Q16378 134 aa10.74□□□□□ -0.69
COL9A2-205ENST00000461118 S100A7L2Q5SY68 101 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms