RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 DNAH6Q9C0G6 4158 aa3.38□□□□□ -1.87
SF3A3-202ENST00000460925 VPS13DQ5THJ4 4388 aa3.38□□□□□ -1.87
SF3A3-202ENST00000460925 SMIM27A0A1W2PRY6 76 aa3.38□□□□□ -1.87
SF3A3-202ENST00000460925 GAS8-AS1O95177 125 aa3.38□□□□□ -1.87
SF3A3-202ENST00000460925 MGPP08493 103 aa3.38□□□□□ -1.87
SF3A3-202ENST00000460925 FAM74A4Q5TZK3 123 aa3.38□□□□□ -1.87
SF3A3-202ENST00000460925 SPANXN1Q5VSR9 72 aa3.38□□□□□ -1.87
SF3A3-202ENST00000460925 ZFP2Q6ZN57 461 aa3.38□□□□□ -1.87
SF3A3-202ENST00000460925 SERP2Q8N6R1 65 aa3.38□□□□□ -1.87
SF3A3-202ENST00000460925 COPS9Q8WXC6 57 aa3.38□□□□□ -1.87
SF3A3-202ENST00000460925 HYDINQ4G0P3 5121 aa3.38□□□□□ -1.87
SF3A3-202ENST00000460925 SACSQ9NZJ4 4579 aa3.38□□□□□ -1.87
SF3A3-202ENST00000460925 STAB2Q8WWQ8 2551 aa3.38□□□□□ -1.87
SF3A3-202ENST00000460925 TRGV2A0A075B6R0 118 aa3.37□□□□□ -1.87
SF3A3-202ENST00000460925 A0A0J9YY99 117 aa3.37□□□□□ -1.87
SF3A3-202ENST00000460925 IBA57-AS1B1ANH7 110 aa3.37□□□□□ -1.87
SF3A3-202ENST00000460925 HLA-DQA1P01909 254 aa3.37□□□□□ -1.87
SF3A3-202ENST00000460925 SPART-AS1P0CW21 52 aa3.37□□□□□ -1.87
SF3A3-202ENST00000460925 LINC00612Q8N6U2 182 aa3.37□□□□□ -1.87
SF3A3-202ENST00000460925 C14orf178Q8N769 122 aaPredicted RBP3.37□□□□□ -1.87
SF3A3-202ENST00000460925 DEFB104AQ8WTQ1 72 aa3.37□□□□□ -1.87
SF3A3-202ENST00000460925 VSIG2Q96IQ7 327 aa3.37□□□□□ -1.87
SF3A3-202ENST00000460925 TIMM17AQ99595 171 aa3.37□□□□□ -1.87
SF3A3-202ENST00000460925 LINC00474Q9P2X8 69 aa3.37□□□□□ -1.87
SF3A3-202ENST00000460925 DNAH10Q8IVF4 4471 aa3.36□□□□□ -1.87
SF3A3-202ENST00000460925 A0A096LPF7 62 aa3.36□□□□□ -1.87
SF3A3-202ENST00000460925 IGHV3OR16-9A0A0B4J2B5 98 aa3.36□□□□□ -1.87
SF3A3-202ENST00000460925 A0A1B0GUT8 65 aa3.36□□□□□ -1.87
SF3A3-202ENST00000460925 KRTAP16-1A8MUX0 517 aa3.36□□□□□ -1.87
SF3A3-202ENST00000460925 COX7A2LO14548 114 aa3.36□□□□□ -1.87
SF3A3-202ENST00000460925 TIMM17BO60830 172 aa3.36□□□□□ -1.87
SF3A3-202ENST00000460925 LGALS3P17931 250 aaKnown RBP3.36□□□□□ -1.87
SF3A3-202ENST00000460925 MP68P56378 58 aa3.36□□□□□ -1.87
SF3A3-202ENST00000460925 UBE2D3P61077 147 aa3.36□□□□□ -1.87
SF3A3-202ENST00000460925 HERVK_113P61574 105 aa3.36□□□□□ -1.87
SF3A3-202ENST00000460925 UBE2D2P62837 147 aa3.36□□□□□ -1.87
SF3A3-202ENST00000460925 HBBP68871 147 aa3.36□□□□□ -1.87
SF3A3-202ENST00000460925 ZNF56Q15929 161 aa3.36□□□□□ -1.87
SF3A3-202ENST00000460925 LYPD5Q6UWN5 251 aa3.36□□□□□ -1.87
SF3A3-202ENST00000460925 SDIM1Q6ZPB5 146 aa3.36□□□□□ -1.87
SF3A3-202ENST00000460925 KRTAP7-1Q8IUC3 87 aa3.36□□□□□ -1.87
SF3A3-202ENST00000460925 FAM19A2Q8N3H0 131 aa3.36□□□□□ -1.87
SF3A3-202ENST00000460925 TOMM6Q96B49 74 aa3.36□□□□□ -1.87
SF3A3-202ENST00000460925 GFRA4Q9GZZ7 299 aa3.36□□□□□ -1.87
SF3A3-202ENST00000460925 NXT2Q9NPJ8 142 aaKnown RBP3.36□□□□□ -1.87
SF3A3-202ENST00000460925 KIF25-AS1Q9Y6Z4 181 aa3.36□□□□□ -1.87
SF3A3-202ENST00000460925 TRGV4A0A0C4DH28 118 aa3.35□□□□□ -1.87
SF3A3-202ENST00000460925 IGHV1-24A0A0C4DH33 117 aa3.35□□□□□ -1.87
SF3A3-202ENST00000460925 UBE2L6O14933 153 aa3.35□□□□□ -1.87
SF3A3-202ENST00000460925 HBDP02042 147 aa3.35□□□□□ -1.87
SF3A3-202ENST00000460925 LINC00315P59091 139 aa3.35□□□□□ -1.87
SF3A3-202ENST00000460925 C14orf177Q52M58 125 aa3.35□□□□□ -1.87
SF3A3-202ENST00000460925 REG3GQ6UW15 175 aa3.35□□□□□ -1.87
SF3A3-202ENST00000460925 RPL39LQ96EH5 51 aaKnown RBP3.35□□□□□ -1.87
SF3A3-202ENST00000460925 CNFNQ9BYD5 112 aa3.35□□□□□ -1.87
SF3A3-202ENST00000460925 FRAS1Q86XX4 4008 aa3.35□□□□□ -1.87
SF3A3-202ENST00000460925 DEFB131BA0A096LNP1 70 aa3.34□□□□□ -1.87
SF3A3-202ENST00000460925 LOC389332A0A1B0GUA5 103 aa3.34□□□□□ -1.87
SF3A3-202ENST00000460925 A6NN06 94 aa3.34□□□□□ -1.87
SF3A3-202ENST00000460925 CCKP06307 115 aa3.34□□□□□ -1.87
SF3A3-202ENST00000460925 SCGB1C2P0DMR2 95 aa3.34□□□□□ -1.87
SF3A3-202ENST00000460925 KIAA0087Q14695 138 aa3.34□□□□□ -1.87
SF3A3-202ENST00000460925 MRPL51Q4U2R6 128 aaKnown RBP3.34□□□□□ -1.87
SF3A3-202ENST00000460925 SLC25A29Q8N8R3 303 aa3.34□□□□□ -1.87
SF3A3-202ENST00000460925 TRAV10A0A0B4J240 114 aa3.33□□□□□ -1.88
SF3A3-202ENST00000460925 A0A0J9YXV3 536 aa3.33□□□□□ -1.88
SF3A3-202ENST00000460925 D6R8Y8 96 aa3.33□□□□□ -1.88
SF3A3-202ENST00000460925 C6orf99Q4VX62 202 aa3.33□□□□□ -1.88
SF3A3-202ENST00000460925 TMEM170BQ5T4T1 132 aa3.33□□□□□ -1.88
SF3A3-202ENST00000460925 FAM104BQ5XKR9 115 aa3.33□□□□□ -1.88
SF3A3-202ENST00000460925 C7orf65Q6ZTY9 151 aa3.33□□□□□ -1.88
SF3A3-202ENST00000460925 MUC7Q8TAX7 377 aa3.33□□□□□ -1.88
SF3A3-202ENST00000460925 CHCHD10Q8WYQ3 142 aaPredicted RBP3.33□□□□□ -1.88
SF3A3-202ENST00000460925 H7BZZ5 65 aa3.32□□□□□ -1.88
SF3A3-202ENST00000460925 M0QY20 66 aa3.32□□□□□ -1.88
SF3A3-202ENST00000460925 NPYP01303 97 aa3.32□□□□□ -1.88
SF3A3-202ENST00000460925 ATP5EP56381 51 aaPredicted RBP3.32□□□□□ -1.88
SF3A3-202ENST00000460925 LINC00643Q86TS7 51 aa3.32□□□□□ -1.88
SF3A3-202ENST00000460925 DIRC1Q969H9 104 aa3.32□□□□□ -1.88
SF3A3-202ENST00000460925 TMEM243Q9BU79 118 aa3.32□□□□□ -1.88
SF3A3-202ENST00000460925 NHP2Q9NX24 153 aaKnown RBP3.32□□□□□ -1.88
SF3A3-202ENST00000460925 PRO0255Q9UI72 69 aa3.32□□□□□ -1.88
SF3A3-202ENST00000460925 DNAH2Q9P225 4427 aa3.31□□□□□ -1.88
SF3A3-202ENST00000460925 IGHV6-1A0A0B4J1U7 121 aa3.31□□□□□ -1.88
SF3A3-202ENST00000460925 CKS2P33552 79 aa3.31□□□□□ -1.88
SF3A3-202ENST00000460925 RHOHQ15669 191 aa3.31□□□□□ -1.88
SF3A3-202ENST00000460925 LINC00173Q6ZV60 143 aa3.31□□□□□ -1.88
SF3A3-202ENST00000460925 DHRS4-AS1Q9P1J3 65 aa3.31□□□□□ -1.88
SF3A3-202ENST00000460925 ICOSQ9Y6W8 199 aa3.31□□□□□ -1.88
SF3A3-202ENST00000460925 TENM2Q9NT68 2774 aa3.3□□□□□ -1.88
SF3A3-202ENST00000460925 KMT2CQ8NEZ4 4911 aaKnown RBP3.3□□□□□ -1.88
SF3A3-202ENST00000460925 TRBV6-4A0A1B0GX49 114 aa3.3□□□□□ -1.88
SF3A3-202ENST00000460925 NUPR2A6NF83 97 aa3.3□□□□□ -1.88
SF3A3-202ENST00000460925 SDHAF1A6NFY7 115 aa3.3□□□□□ -1.88
SF3A3-202ENST00000460925 PSPHP1O15172 72 aa3.3□□□□□ -1.88
SF3A3-202ENST00000460925 ACYP1P07311 99 aa3.3□□□□□ -1.88
SF3A3-202ENST00000460925 CIRBPQ14011 172 aaKnown RBP3.3□□□□□ -1.88
SF3A3-202ENST00000460925 LINC01554Q52M75 96 aa3.3□□□□□ -1.88
SF3A3-202ENST00000460925 CASC10Q5T4H9 136 aa3.3□□□□□ -1.88
SF3A3-202ENST00000460925 APLNQ9ULZ1 77 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms