RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 BPTFQ12830 3046 aa4.34□□□□□ -1.71
HLA-DQA1-205ENST00000460633 LINC00528Q8N1L1 170 aa4.34□□□□□ -1.72
HLA-DQA1-205ENST00000460633 LINC00476Q8WZB0 136 aa4.34□□□□□ -1.72
HLA-DQA1-205ENST00000460633 CELA1Q9UNI1 258 aa4.34□□□□□ -1.72
HLA-DQA1-205ENST00000460633 M0R2T5 61 aa4.33□□□□□ -1.72
HLA-DQA1-205ENST00000460633 SSBP3-AS1Q7Z2R9 100 aa4.33□□□□□ -1.72
HLA-DQA1-205ENST00000460633 Q8N3U1 123 aa4.33□□□□□ -1.72
HLA-DQA1-205ENST00000460633 SORL1Q92673 2214 aa4.33□□□□□ -1.72
HLA-DQA1-205ENST00000460633 TM2D3Q9BRN9 247 aa4.33□□□□□ -1.72
HLA-DQA1-205ENST00000460633 BCE1O60756 84 aa4.33□□□□□ -1.72
HLA-DQA1-205ENST00000460633 NCOR2Q9Y618 2525 aa4.33□□□□□ -1.72
HLA-DQA1-205ENST00000460633 SEC61BP60468 96 aaKnown RBP4.32□□□□□ -1.72
HLA-DQA1-205ENST00000460633 ZNF575Q86XF7 245 aa4.32□□□□□ -1.72
HLA-DQA1-205ENST00000460633 FAM218AQ96MZ4 157 aa4.32□□□□□ -1.72
HLA-DQA1-205ENST00000460633 DNAH10OSP0CZ25 163 aa4.32□□□□□ -1.72
HLA-DQA1-205ENST00000460633 IGLV4-60A0A075B6I1 120 aa4.32□□□□□ -1.72
HLA-DQA1-205ENST00000460633 LCE6AA0A183 80 aa4.32□□□□□ -1.72
HLA-DQA1-205ENST00000460633 C19orf73Q9NVV2 129 aa4.32□□□□□ -1.72
HLA-DQA1-205ENST00000460633 LINC00313P59037 77 aa4.31□□□□□ -1.72
HLA-DQA1-205ENST00000460633 PRRC2AP48634 2157 aaKnown RBP4.31□□□□□ -1.72
HLA-DQA1-205ENST00000460633 PSPHP1O15172 72 aa4.31□□□□□ -1.72
HLA-DQA1-205ENST00000460633 SMCR5Q8TEV8 140 aa4.31□□□□□ -1.72
HLA-DQA1-205ENST00000460633 LINC01547P58512 204 aaPredicted RBP4.31□□□□□ -1.72
HLA-DQA1-205ENST00000460633 LINC00575Q6W349 94 aa4.31□□□□□ -1.72
HLA-DQA1-205ENST00000460633 C22orf24Q9Y442 160 aa4.31□□□□□ -1.72
HLA-DQA1-205ENST00000460633 CHD9Q3L8U1 2897 aa4.31□□□□□ -1.72
HLA-DQA1-205ENST00000460633 WDR87Q6ZQQ6 2873 aa4.3□□□□□ -1.72
HLA-DQA1-205ENST00000460633 ANKHD1Q8IWZ3 2542 aaKnown RBP4.3□□□□□ -1.72
HLA-DQA1-205ENST00000460633 CASC10Q5T4H9 136 aa4.3□□□□□ -1.72
HLA-DQA1-205ENST00000460633 TMEM254Q8TBM7 123 aa4.3□□□□□ -1.72
HLA-DQA1-205ENST00000460633 A8MTW9 85 aa4.29□□□□□ -1.72
HLA-DQA1-205ENST00000460633 IGLV5-39A0A0G2JS06 123 aa4.29□□□□□ -1.72
HLA-DQA1-205ENST00000460633 UNQ6190/PRO20217Q6UXQ8 127 aa4.29□□□□□ -1.72
HLA-DQA1-205ENST00000460633 TRBV10-3A0A0K0K1G6 114 aa4.29□□□□□ -1.72
HLA-DQA1-205ENST00000460633 HTTP42858 3142 aa4.29□□□□□ -1.72
HLA-DQA1-205ENST00000460633 Q6ZSA8 131 aa4.28□□□□□ -1.72
HLA-DQA1-205ENST00000460633 LINC00588Q9Y4M8 146 aa4.28□□□□□ -1.72
HLA-DQA1-205ENST00000460633 A0A087WTM6 91 aa4.28□□□□□ -1.72
HLA-DQA1-205ENST00000460633 CXCL6P80162 114 aa4.28□□□□□ -1.72
HLA-DQA1-205ENST00000460633 MOBPQ13875 183 aa4.28□□□□□ -1.72
HLA-DQA1-205ENST00000460633 C7orf65Q6ZTY9 151 aa4.28□□□□□ -1.72
HLA-DQA1-205ENST00000460633 H3BPC8 53 aa4.28□□□□□ -1.72
HLA-DQA1-205ENST00000460633 LITAFQ99732 161 aa4.28□□□□□ -1.72
HLA-DQA1-205ENST00000460633 SPINK1P00995 79 aa4.28□□□□□ -1.72
HLA-DQA1-205ENST00000460633 DNAH12Q6ZR08 3092 aa4.27□□□□□ -1.73
HLA-DQA1-205ENST00000460633 HRES1P13985 223 aa4.27□□□□□ -1.73
HLA-DQA1-205ENST00000460633 KTN1-AS1Q86SY8 53 aa4.27□□□□□ -1.73
HLA-DQA1-205ENST00000460633 RETNLBQ9BQ08 111 aa4.27□□□□□ -1.73
HLA-DQA1-205ENST00000460633 GVQW2A0A096LPI5 108 aaPredicted RBP4.27□□□□□ -1.73
HLA-DQA1-205ENST00000460633 IGF2RP11717 2491 aa4.27□□□□□ -1.73
HLA-DQA1-205ENST00000460633 LINC00208Q96KT6 92 aa4.26□□□□□ -1.73
HLA-DQA1-205ENST00000460633 PRR26Q8N8Z3 221 aa4.26□□□□□ -1.73
HLA-DQA1-205ENST00000460633 PKD1L2Q7Z442 2459 aa4.26□□□□□ -1.73
HLA-DQA1-205ENST00000460633 IGLV5-37A0A075B6J1 123 aa4.25□□□□□ -1.73
HLA-DQA1-205ENST00000460633 Q8NAQ8 132 aa4.25□□□□□ -1.73
HLA-DQA1-205ENST00000460633 DOPEY1Q5JWR5 2465 aa4.25□□□□□ -1.73
HLA-DQA1-205ENST00000460633 Q6ZRU5 148 aa4.25□□□□□ -1.73
HLA-DQA1-205ENST00000460633 IGLV5-45A0A087WSX0 123 aa4.25□□□□□ -1.73
HLA-DQA1-205ENST00000460633 CENPFP49454 3210 aa4.24□□□□□ -1.73
HLA-DQA1-205ENST00000460633 Q96NJ1 140 aa4.24□□□□□ -1.73
HLA-DQA1-205ENST00000460633 APLNQ9ULZ1 77 aa4.24□□□□□ -1.73
HLA-DQA1-205ENST00000460633 PRR15Q8IV56 129 aa4.24□□□□□ -1.73
HLA-DQA1-205ENST00000460633 IGKV2D-30A0A075B6S6 120 aa4.24□□□□□ -1.73
HLA-DQA1-205ENST00000460633 IGKV2-30P06310 120 aa4.24□□□□□ -1.73
HLA-DQA1-205ENST00000460633 PCOTHQ58A44 107 aa4.24□□□□□ -1.73
HLA-DQA1-205ENST00000460633 PLA2G2DQ9UNK4 145 aa4.24□□□□□ -1.73
HLA-DQA1-205ENST00000460633 TNP2Q05952 138 aa4.23□□□□□ -1.73
HLA-DQA1-205ENST00000460633 IGHV3OR16-9A0A0B4J2B5 98 aa4.23□□□□□ -1.73
HLA-DQA1-205ENST00000460633 CHTF8P0CG12 524 aa4.23□□□□□ -1.73
HLA-DQA1-205ENST00000460633 C11orf72Q8NBR9 251 aa4.23□□□□□ -1.73
HLA-DQA1-205ENST00000460633 ZNF861PO60384 105 aa4.23□□□□□ -1.73
HLA-DQA1-205ENST00000460633 IGLV7-46A0A075B6I9 117 aa4.22□□□□□ -1.73
HLA-DQA1-205ENST00000460633 TRAV22A0A0B4J277 110 aa4.22□□□□□ -1.73
HLA-DQA1-205ENST00000460633 HCG22E2RYF7 251 aa4.22□□□□□ -1.73
HLA-DQA1-205ENST00000460633 Q6ZQT0 140 aa4.22□□□□□ -1.73
HLA-DQA1-205ENST00000460633 SMIM29Q86T20 159 aa4.22□□□□□ -1.73
HLA-DQA1-205ENST00000460633 SONP18583 2426 aaKnown RBP4.22□□□□□ -1.73
HLA-DQA1-205ENST00000460633 A0A087WSZ3 146 aa4.22□□□□□ -1.73
HLA-DQA1-205ENST00000460633 DEFB116Q30KQ4 102 aa4.22□□□□□ -1.73
HLA-DQA1-205ENST00000460633 C2CD3Q4AC94 2353 aa4.21□□□□□ -1.73
HLA-DQA1-205ENST00000460633 CYSTM1Q9H1C7 97 aa4.21□□□□□ -1.74
HLA-DQA1-205ENST00000460633 PCNTO95613 3336 aa4.21□□□□□ -1.74
HLA-DQA1-205ENST00000460633 NOTCH2Q04721 2471 aa4.21□□□□□ -1.74
HLA-DQA1-205ENST00000460633 LOC101927531A0A1B0GV80 90 aa4.21□□□□□ -1.74
HLA-DQA1-205ENST00000460633 LCA10Q71F78 164 aa4.21□□□□□ -1.74
HLA-DQA1-205ENST00000460633 PRLHP81277 87 aa4.21□□□□□ -1.74
HLA-DQA1-205ENST00000460633 LINC00167Q96N53 147 aa4.2□□□□□ -1.74
HLA-DQA1-205ENST00000460633 H0Y9P7 68 aa4.2□□□□□ -1.74
HLA-DQA1-205ENST00000460633 IGLV7-43P04211 117 aa4.2□□□□□ -1.74
HLA-DQA1-205ENST00000460633 FP248Q71RG6 208 aaPredicted RBP4.2□□□□□ -1.74
HLA-DQA1-205ENST00000460633 KRTAP10-11P60412 298 aa4.19□□□□□ -1.74
HLA-DQA1-205ENST00000460633 HIVEP3Q5T1R4 2406 aa4.19□□□□□ -1.74
HLA-DQA1-205ENST00000460633 ZNF292O60281 2723 aa4.19□□□□□ -1.74
HLA-DQA1-205ENST00000460633 CR1P17927 2039 aa4.19□□□□□ -1.74
HLA-DQA1-205ENST00000460633 FAM229BQ4G0N7 80 aa4.19□□□□□ -1.74
HLA-DQA1-205ENST00000460633 SPG11Q96JI7 2443 aa4.19□□□□□ -1.74
HLA-DQA1-205ENST00000460633 LOC110117498A0A087WWA1 95 aa4.19□□□□□ -1.74
HLA-DQA1-205ENST00000460633 PHF5AQ7RTV0 110 aaKnown RBP4.19□□□□□ -1.74
HLA-DQA1-205ENST00000460633 H7BZZ5 65 aa4.18□□□□□ -1.74
HLA-DQA1-205ENST00000460633 ANKRD11Q6UB99 2663 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms