RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 C5orf47Q569G3 176 aa6.68□□□□□ -1.34
EPB41-208ENST00000460378 TSHBP01222 138 aa6.67□□□□□ -1.34
EPB41-208ENST00000460378 PYGO1Q9Y3Y4 419 aa6.67□□□□□ -1.34
EPB41-208ENST00000460378 A0A087WYN8 130 aa6.67□□□□□ -1.34
EPB41-208ENST00000460378 IGKV2-28A0A075B6P5 120 aa6.67□□□□□ -1.34
EPB41-208ENST00000460378 RPL37AP8A6NKH3 93 aa6.67□□□□□ -1.34
EPB41-208ENST00000460378 IGKV2D-28P01615 120 aa6.67□□□□□ -1.34
EPB41-208ENST00000460378 LINC00310P59036 64 aa6.66□□□□□ -1.34
EPB41-208ENST00000460378 NDUFC2-KCTD14E9PQ53 114 aa6.66□□□□□ -1.34
EPB41-208ENST00000460378 M0R378 163 aa6.66□□□□□ -1.34
EPB41-208ENST00000460378 UNQ6190/PRO20217Q6UXQ8 127 aa6.66□□□□□ -1.34
EPB41-208ENST00000460378 Q8IZM0 81 aa6.66□□□□□ -1.34
EPB41-208ENST00000460378 LAMA1P25391 3075 aa6.66□□□□□ -1.34
EPB41-208ENST00000460378 JMJD7-PLA2G4BH0Y9G9 81 aa6.66□□□□□ -1.34
EPB41-208ENST00000460378 TYMSOSQ8TAI1 123 aa6.66□□□□□ -1.34
EPB41-208ENST00000460378 FUSP35637 526 aaKnown RBP eCLIP6.65□□□□□ -1.34
EPB41-208ENST00000460378 TRAV23DV6A0A075B6W5 121 aa6.65□□□□□ -1.34
EPB41-208ENST00000460378 NREPQ16612 68 aa6.65□□□□□ -1.34
EPB41-208ENST00000460378 PPDPFQ9H3Y8 114 aa6.65□□□□□ -1.34
EPB41-208ENST00000460378 SDIM1Q6ZPB5 146 aa6.64□□□□□ -1.35
EPB41-208ENST00000460378 Q6ZRU5 148 aa6.64□□□□□ -1.35
EPB41-208ENST00000460378 C9orf163Q8N9P6 203 aa6.64□□□□□ -1.35
EPB41-208ENST00000460378 IGLV4-3A0A075B6K6 122 aa6.64□□□□□ -1.35
EPB41-208ENST00000460378 CDIP1Q9H305 208 aa6.64□□□□□ -1.35
EPB41-208ENST00000460378 CDKN2A-AS1Q9UH64 79 aa6.64□□□□□ -1.35
EPB41-208ENST00000460378 CIRBP-AS1Q8TBR5 109 aa6.63□□□□□ -1.35
EPB41-208ENST00000460378 CSDC2Q9Y534 153 aaKnown RBP6.63□□□□□ -1.35
EPB41-208ENST00000460378 FREM2Q5SZK8 3169 aa6.63□□□□□ -1.35
EPB41-208ENST00000460378 ZZEF1O43149 2961 aa6.63□□□□□ -1.35
EPB41-208ENST00000460378 TRIAP1O43715 76 aa6.63□□□□□ -1.35
EPB41-208ENST00000460378 MRPL55Q7Z7F7 128 aaKnown RBP6.63□□□□□ -1.35
EPB41-208ENST00000460378 ZNF22P17026 224 aaPredicted RBP6.63□□□□□ -1.35
EPB41-208ENST00000460378 C20orf197Q8N268 126 aa6.63□□□□□ -1.35
EPB41-208ENST00000460378 POLR2KP53803 58 aaKnown RBP6.63□□□□□ -1.35
EPB41-208ENST00000460378 NDUFS5O43920 106 aa6.63□□□□□ -1.35
EPB41-208ENST00000460378 IGLV9-49A0A0B4J1Y8 123 aa6.62□□□□□ -1.35
EPB41-208ENST00000460378 UQCRQO14949 82 aa6.62□□□□□ -1.35
EPB41-208ENST00000460378 COX8CQ7Z4L0 72 aa6.62□□□□□ -1.35
EPB41-208ENST00000460378 LINC00694P0DN24 101 aa6.62□□□□□ -1.35
EPB41-208ENST00000460378 COX7BP24311 80 aa6.62□□□□□ -1.35
EPB41-208ENST00000460378 ENHOQ6UWT2 76 aa6.62□□□□□ -1.35
EPB41-208ENST00000460378 TMEM256-PLSCR3K7ERE1 68 aa6.62□□□□□ -1.35
EPB41-208ENST00000460378 GAS8-AS1O95177 125 aa6.62□□□□□ -1.35
EPB41-208ENST00000460378 NDUFC2O95298 119 aa6.61□□□□□ -1.35
EPB41-208ENST00000460378 BRK1Q8WUW1 75 aa6.61□□□□□ -1.35
EPB41-208ENST00000460378 LIMD2Q9BT23 127 aa6.61□□□□□ -1.35
EPB41-208ENST00000460378 PLA2G2DQ9UNK4 145 aa6.61□□□□□ -1.35
EPB41-208ENST00000460378 CELSR2Q9HCU4 2923 aa6.61□□□□□ -1.35
EPB41-208ENST00000460378 CHTF8P0CG12 524 aa6.61□□□□□ -1.35
EPB41-208ENST00000460378 TMEM223A0PJW6 202 aa6.61□□□□□ -1.35
EPB41-208ENST00000460378 COX17Q14061 63 aa6.61□□□□□ -1.35
EPB41-208ENST00000460378 SCXQ7RTU7 201 aa6.6□□□□□ -1.35
EPB41-208ENST00000460378 LINC01561Q8N1V8 128 aa6.6□□□□□ -1.35
EPB41-208ENST00000460378 SLPIP03973 132 aa6.6□□□□□ -1.35
EPB41-208ENST00000460378 BOD1L1Q8NFC6 3051 aa6.6□□□□□ -1.35
EPB41-208ENST00000460378 GVQW2A0A096LPI5 108 aaPredicted RBP6.6□□□□□ -1.35
EPB41-208ENST00000460378 Q6ZR54 194 aa6.59□□□□□ -1.35
EPB41-208ENST00000460378 MP68P56378 58 aa6.59□□□□□ -1.35
EPB41-208ENST00000460378 LINC00308Q8TCZ7 52 aa6.59□□□□□ -1.35
EPB41-208ENST00000460378 URB1-AS1Q96HZ7 61 aa6.59□□□□□ -1.35
EPB41-208ENST00000460378 SERTAD4-AS1Q5TG53 156 aa6.59□□□□□ -1.36
EPB41-208ENST00000460378 C3orf22Q8N5N4 141 aa6.58□□□□□ -1.36
EPB41-208ENST00000460378 CCDC179H3BU77 68 aa6.58□□□□□ -1.36
EPB41-208ENST00000460378 CNFNQ9BYD5 112 aa6.58□□□□□ -1.36
EPB41-208ENST00000460378 NRACQ8N912 160 aa6.58□□□□□ -1.36
EPB41-208ENST00000460378 DHRS4-AS1Q9P1J3 65 aa6.58□□□□□ -1.36
EPB41-208ENST00000460378 NDUFB1O75438 58 aa6.57□□□□□ -1.36
EPB41-208ENST00000460378 Q8N1X5 172 aa6.57□□□□□ -1.36
EPB41-208ENST00000460378 Q8N3U1 123 aa6.57□□□□□ -1.36
EPB41-208ENST00000460378 FBN2P35556 2912 aa6.57□□□□□ -1.36
EPB41-208ENST00000460378 PHF5AQ7RTV0 110 aaKnown RBP6.57□□□□□ -1.36
EPB41-208ENST00000460378 C22orf24Q9Y442 160 aa6.57□□□□□ -1.36
EPB41-208ENST00000460378 MPLKIPQ8TAP9 179 aa6.56□□□□□ -1.36
EPB41-208ENST00000460378 PSORS1C2Q9UIG4 136 aa6.56□□□□□ -1.36
EPB41-208ENST00000460378 NTM-AS1Q6ZSK4 140 aa6.55□□□□□ -1.36
EPB41-208ENST00000460378 SPINK6Q6UWN8 80 aa6.55□□□□□ -1.36
EPB41-208ENST00000460378 LRBAP50851 2863 aa6.55□□□□□ -1.36
EPB41-208ENST00000460378 FAM236DA0A1B0GTK5 79 aa6.55□□□□□ -1.36
EPB41-208ENST00000460378 FAM236CP0DP71 79 aa6.55□□□□□ -1.36
EPB41-208ENST00000460378 H3BQ85 93 aa6.54□□□□□ -1.36
EPB41-208ENST00000460378 PDE6GP18545 87 aa6.54□□□□□ -1.36
EPB41-208ENST00000460378 MXRA5Q9NR99 2828 aa6.54□□□□□ -1.36
EPB41-208ENST00000460378 PDZD2O15018 2839 aa6.54□□□□□ -1.36
EPB41-208ENST00000460378 BPY2O14599 106 aa6.54□□□□□ -1.36
EPB41-208ENST00000460378 LINC00242Q5T6M2 205 aa6.53□□□□□ -1.36
EPB41-208ENST00000460378 HRCT1Q6UXD1 115 aa6.53□□□□□ -1.36
EPB41-208ENST00000460378 LST1O00453 97 aa6.53□□□□□ -1.36
EPB41-208ENST00000460378 DCHS1Q96JQ0 3298 aa6.53□□□□□ -1.36
EPB41-208ENST00000460378 CNBPP62633 177 aaKnown RBP6.53□□□□□ -1.36
EPB41-208ENST00000460378 SPAG11AQ6PDA7 123 aa6.53□□□□□ -1.36
EPB41-208ENST00000460378 CELSR3Q9NYQ7 3312 aa6.52□□□□□ -1.37
EPB41-208ENST00000460378 OXTP01178 125 aa6.52□□□□□ -1.37
EPB41-208ENST00000460378 FBN3Q75N90 2809 aa6.52□□□□□ -1.37
EPB41-208ENST00000460378 PRYO14603 147 aa6.52□□□□□ -1.37
EPB41-208ENST00000460378 KRTAP10-2P60368 255 aa6.51□□□□□ -1.37
EPB41-208ENST00000460378 C6orf99Q4VX62 202 aa6.51□□□□□ -1.37
EPB41-208ENST00000460378 COX6B2Q6YFQ2 88 aa6.51□□□□□ -1.37
EPB41-208ENST00000460378 SERP2Q8N6R1 65 aa6.51□□□□□ -1.37
EPB41-208ENST00000460378 SVIPQ8NHG7 77 aa6.51□□□□□ -1.37
EPB41-208ENST00000460378 KRTAP10-1P60331 282 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms