RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 NANOS2P60321 138 aaKnown RBP6.01□□□□□ -1.45
HDAC3-202ENST00000459727 C6orf99Q4VX62 202 aa6.01□□□□□ -1.45
HDAC3-202ENST00000459727 CELA1Q9UNI1 258 aa6.01□□□□□ -1.45
HDAC3-202ENST00000459727 LOC110117498A0A087WWA1 95 aa6□□□□□ -1.45
HDAC3-202ENST00000459727 hADV29S1A0JD25 119 aa6□□□□□ -1.45
HDAC3-202ENST00000459727 HIST1H4AP62805 103 aaKnown RBP6□□□□□ -1.45
HDAC3-202ENST00000459727 EGFEM1PQ0D2K5 195 aa6□□□□□ -1.45
HDAC3-202ENST00000459727 LYPD5Q6UWN5 251 aa6□□□□□ -1.45
HDAC3-202ENST00000459727 DIRC1Q969H9 104 aa6□□□□□ -1.45
HDAC3-202ENST00000459727 C2orf48Q96LS8 159 aa6□□□□□ -1.45
HDAC3-202ENST00000459727 UBL5Q9BZL1 73 aa6□□□□□ -1.45
HDAC3-202ENST00000459727 KLK12Q9UKR0 248 aa6□□□□□ -1.45
HDAC3-202ENST00000459727 CCDC179H3BU77 68 aa5.99□□□□□ -1.45
HDAC3-202ENST00000459727 DEFB4AO15263 64 aa5.99□□□□□ -1.45
HDAC3-202ENST00000459727 C3orf22Q8N5N4 141 aa5.99□□□□□ -1.45
HDAC3-202ENST00000459727 SVEP1Q4LDE5 3571 aa5.98□□□□□ -1.45
HDAC3-202ENST00000459727 TRAV23DV6A0A075B6W5 121 aa5.98□□□□□ -1.45
HDAC3-202ENST00000459727 NCR3O14931 201 aa5.98□□□□□ -1.45
HDAC3-202ENST00000459727 RPL18AQ02543 176 aaKnown RBP5.98□□□□□ -1.45
HDAC3-202ENST00000459727 ENHOQ6UWT2 76 aa5.98□□□□□ -1.45
HDAC3-202ENST00000459727 UNQ6190/PRO20217Q6UXQ8 127 aa5.98□□□□□ -1.45
HDAC3-202ENST00000459727 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.98□□□□□ -1.45
HDAC3-202ENST00000459727 LINC00526Q96FQ7 95 aa5.98□□□□□ -1.45
HDAC3-202ENST00000459727 LINC00846Q9NV44 126 aa5.98□□□□□ -1.45
HDAC3-202ENST00000459727 BCE1O60756 84 aa5.97□□□□□ -1.45
HDAC3-202ENST00000459727 COX7CP15954 63 aa5.97□□□□□ -1.45
HDAC3-202ENST00000459727 RBM3P98179 157 aaKnown RBP5.97□□□□□ -1.45
HDAC3-202ENST00000459727 C9orf153Q5TBE3 101 aa5.97□□□□□ -1.45
HDAC3-202ENST00000459727 C6orf223Q8N319 242 aa5.97□□□□□ -1.45
HDAC3-202ENST00000459727 TLN2Q9Y4G6 2542 aa5.97□□□□□ -1.45
HDAC3-202ENST00000459727 M0R378 163 aa5.96□□□□□ -1.46
HDAC3-202ENST00000459727 SLPIP03973 132 aa5.96□□□□□ -1.46
HDAC3-202ENST00000459727 KPRPQ5T749 579 aaPredicted RBP5.96□□□□□ -1.46
HDAC3-202ENST00000459727 CAMK2N2Q96S95 79 aa5.96□□□□□ -1.46
HDAC3-202ENST00000459727 DSCR8Q96T75 97 aa5.96□□□□□ -1.46
HDAC3-202ENST00000459727 HIVEP2P31629 2446 aa5.96□□□□□ -1.46
HDAC3-202ENST00000459727 CRYGAP11844 174 aa5.95□□□□□ -1.46
HDAC3-202ENST00000459727 COX7BP24311 80 aa5.95□□□□□ -1.46
HDAC3-202ENST00000459727 C9orf116Q5BN46 136 aaPredicted RBP5.95□□□□□ -1.46
HDAC3-202ENST00000459727 LINC01556Q5JQF7 62 aa5.95□□□□□ -1.46
HDAC3-202ENST00000459727 MDFIQ99750 246 aa5.95□□□□□ -1.46
HDAC3-202ENST00000459727 C1orf43Q9BWL3 253 aa5.95□□□□□ -1.46
HDAC3-202ENST00000459727 C6orf48Q9UBA6 75 aa5.95□□□□□ -1.46
HDAC3-202ENST00000459727 SS18L2Q9UHA2 77 aa5.95□□□□□ -1.46
HDAC3-202ENST00000459727 LAMTOR3Q9UHA4 124 aa5.95□□□□□ -1.46
HDAC3-202ENST00000459727 MEGF8Q7Z7M0 2845 aa5.95□□□□□ -1.46
HDAC3-202ENST00000459727 NDUFC2-KCTD14E9PQ53 114 aa5.94□□□□□ -1.46
HDAC3-202ENST00000459727 ZNF73O43830 326 aaPredicted RBP5.94□□□□□ -1.46
HDAC3-202ENST00000459727 PRR3P79522 188 aaKnown RBP5.94□□□□□ -1.46
HDAC3-202ENST00000459727 C10orf25Q5T742 122 aa5.94□□□□□ -1.46
HDAC3-202ENST00000459727 SMIM20Q8N5G0 67 aa5.94□□□□□ -1.46
HDAC3-202ENST00000459727 SERP2Q8N6R1 65 aa5.94□□□□□ -1.46
HDAC3-202ENST00000459727 SPATA3Q8NHX4 192 aa5.94□□□□□ -1.46
HDAC3-202ENST00000459727 WNK1Q9H4A3 2382 aa5.94□□□□□ -1.46
HDAC3-202ENST00000459727 ELOF1P60002 83 aaKnown RBP5.93□□□□□ -1.46
HDAC3-202ENST00000459727 C9orf129Q5T035 196 aaKnown RBP5.93□□□□□ -1.46
HDAC3-202ENST00000459727 Q6ZQT0 140 aa5.93□□□□□ -1.46
HDAC3-202ENST00000459727 Q8N3U1 123 aa5.93□□□□□ -1.46
HDAC3-202ENST00000459727 PKD1L1Q8TDX9 2849 aa5.93□□□□□ -1.46
HDAC3-202ENST00000459727 SONP18583 2426 aaKnown RBP5.93□□□□□ -1.46
HDAC3-202ENST00000459727 IGKV3D-7A0A0C4DH55 119 aa5.92□□□□□ -1.46
HDAC3-202ENST00000459727 VPREB1P12018 145 aa5.92□□□□□ -1.46
HDAC3-202ENST00000459727 RMI2Q96E14 147 aa5.92□□□□□ -1.46
HDAC3-202ENST00000459727 USP17L23D6RBM5 183 aa5.91□□□□□ -1.46
HDAC3-202ENST00000459727 CXCL6P80162 114 aa5.91□□□□□ -1.46
HDAC3-202ENST00000459727 KRTAP26-1Q6PEX3 210 aa5.91□□□□□ -1.46
HDAC3-202ENST00000459727 Q6ZQY7 126 aa5.91□□□□□ -1.46
HDAC3-202ENST00000459727 WFDC10BQ8IUB3 73 aa5.91□□□□□ -1.46
HDAC3-202ENST00000459727 DEFB131BA0A096LNP1 70 aa5.9□□□□□ -1.46
HDAC3-202ENST00000459727 A0A1B0GW54 56 aa5.9□□□□□ -1.46
HDAC3-202ENST00000459727 DNAH10OSP0CZ25 163 aa5.9□□□□□ -1.46
HDAC3-202ENST00000459727 Q6ZTC4 211 aa5.9□□□□□ -1.46
HDAC3-202ENST00000459727 Q8NDZ9 215 aa5.9□□□□□ -1.46
HDAC3-202ENST00000459727 C11orf45Q8TAV5 145 aa5.9□□□□□ -1.46
HDAC3-202ENST00000459727 TGP01266 2768 aa5.89□□□□□ -1.47
HDAC3-202ENST00000459727 TLX1NBP0CAT3 122 aa5.89□□□□□ -1.47
HDAC3-202ENST00000459727 TMEM258P61165 79 aa5.89□□□□□ -1.47
HDAC3-202ENST00000459727 SYCNQ0VAF6 134 aa5.89□□□□□ -1.47
HDAC3-202ENST00000459727 C3orf56Q8N813 242 aa5.89□□□□□ -1.47
HDAC3-202ENST00000459727 C15orf56Q8N910 161 aa5.89□□□□□ -1.47
HDAC3-202ENST00000459727 PLA2G2DQ9UNK4 145 aa5.89□□□□□ -1.47
HDAC3-202ENST00000459727 NOTCH3Q9UM47 2321 aa5.89□□□□□ -1.47
HDAC3-202ENST00000459727 PRKDCP78527 4128 aaKnown RBP5.89□□□□□ -1.47
HDAC3-202ENST00000459727 TRAV10A0A0B4J240 114 aa5.88□□□□□ -1.47
HDAC3-202ENST00000459727 TRBV7-4A0A0J9YYF1 115 aa5.88□□□□□ -1.47
HDAC3-202ENST00000459727 Q6ZRU5 148 aa5.88□□□□□ -1.47
HDAC3-202ENST00000459727 NKAPP1Q8N9T2 125 aa5.88□□□□□ -1.47
HDAC3-202ENST00000459727 UPK3BQ9BT76 320 aa5.88□□□□□ -1.47
HDAC3-202ENST00000459727 XAGE1AQ9HD64 81 aa5.88□□□□□ -1.47
HDAC3-202ENST00000459727 IGKV2D-24A0A075B6R9 120 aa5.87□□□□□ -1.47
HDAC3-202ENST00000459727 ESRGQ1W209 222 aa5.87□□□□□ -1.47
HDAC3-202ENST00000459727 HIGD2BQ4VC39 106 aa5.87□□□□□ -1.47
HDAC3-202ENST00000459727 LINC00528Q8N1L1 170 aa5.87□□□□□ -1.47
HDAC3-202ENST00000459727 IGLV5-37A0A075B6J1 123 aa5.86□□□□□ -1.47
HDAC3-202ENST00000459727 KRTAP10-11P60412 298 aa5.86□□□□□ -1.47
HDAC3-202ENST00000459727 RPS28P62857 69 aaKnown RBP5.86□□□□□ -1.47
HDAC3-202ENST00000459727 OXLD1Q5BKU9 147 aa5.86□□□□□ -1.47
HDAC3-202ENST00000459727 KCNQ1DNQ9H478 68 aa5.86□□□□□ -1.47
HDAC3-202ENST00000459727 DHRS4-AS1Q9P1J3 65 aa5.86□□□□□ -1.47
HDAC3-202ENST00000459727 TRRAPQ9Y4A5 3859 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms