RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 ODF3BA8MYP8 253 aa3.76□□□□□ -1.81
HMGB4-202ENST00000458277 FDCSPQ8NFU4 85 aa3.76□□□□□ -1.81
HMGB4-202ENST00000458277 FAM30AQ9NZY2 134 aa3.76□□□□□ -1.81
HMGB4-202ENST00000458277 TOMM7Q9P0U1 55 aa3.76□□□□□ -1.81
HMGB4-202ENST00000458277 DSPP15924 2871 aaKnown RBP3.76□□□□□ -1.81
HMGB4-202ENST00000458277 ZGRF1Q86YA3 2104 aa3.76□□□□□ -1.81
HMGB4-202ENST00000458277 MALRD1Q5VYJ5 2156 aa3.75□□□□□ -1.81
HMGB4-202ENST00000458277 IGLV4-60A0A075B6I1 120 aa3.75□□□□□ -1.81
HMGB4-202ENST00000458277 IGHV4-59P01825 116 aa3.75□□□□□ -1.81
HMGB4-202ENST00000458277 LMO4P61968 165 aa3.75□□□□□ -1.81
HMGB4-202ENST00000458277 C18orf65Q6ZTR6 163 aa3.75□□□□□ -1.81
HMGB4-202ENST00000458277 SMIM29Q86T20 159 aa3.75□□□□□ -1.81
HMGB4-202ENST00000458277 IGF2RP11717 2491 aa3.75□□□□□ -1.81
HMGB4-202ENST00000458277 ARHGAP32A7KAX9 2087 aa3.74□□□□□ -1.81
HMGB4-202ENST00000458277 A0A096LNT2 108 aa3.74□□□□□ -1.81
HMGB4-202ENST00000458277 ATP6V0E1O15342 81 aa3.74□□□□□ -1.81
HMGB4-202ENST00000458277 IGKV2-30P06310 120 aa3.74□□□□□ -1.81
HMGB4-202ENST00000458277 COX7A1P24310 79 aa3.74□□□□□ -1.81
HMGB4-202ENST00000458277 NANOS2P60321 138 aaKnown RBP3.74□□□□□ -1.81
HMGB4-202ENST00000458277 SDK2Q58EX2 2172 aa3.74□□□□□ -1.81
HMGB4-202ENST00000458277 C10orf25Q5T742 122 aa3.74□□□□□ -1.81
HMGB4-202ENST00000458277 Q6ZQY7 126 aa3.74□□□□□ -1.81
HMGB4-202ENST00000458277 DEFB104AQ8WTQ1 72 aa3.74□□□□□ -1.81
HMGB4-202ENST00000458277 PLAC8Q9NZF1 115 aa3.74□□□□□ -1.81
HMGB4-202ENST00000458277 ZFHX4Q86UP3 3567 aa3.74□□□□□ -1.81
HMGB4-202ENST00000458277 CACNA1GO43497 2377 aa3.74□□□□□ -1.81
HMGB4-202ENST00000458277 ACACAQ13085 2346 aa3.73□□□□□ -1.81
HMGB4-202ENST00000458277 EPG5Q9HCE0 2579 aa3.73□□□□□ -1.81
HMGB4-202ENST00000458277 IGHV4-28A0A0C4DH34 117 aa3.73□□□□□ -1.81
HMGB4-202ENST00000458277 IGHV3-11P01762 117 aa3.73□□□□□ -1.81
HMGB4-202ENST00000458277 LYPD2Q6UXB3 125 aa3.73□□□□□ -1.81
HMGB4-202ENST00000458277 LINC01006Q8NI28 216 aa3.73□□□□□ -1.81
HMGB4-202ENST00000458277 RHPN1-AS1Q9BWJ2 59 aa3.73□□□□□ -1.81
HMGB4-202ENST00000458277 ZNF706Q9Y5V0 76 aaPredicted RBP3.73□□□□□ -1.81
HMGB4-202ENST00000458277 ACACBO00763 2458 aa3.73□□□□□ -1.81
HMGB4-202ENST00000458277 PRR14LQ5THK1 2151 aa3.73□□□□□ -1.81
HMGB4-202ENST00000458277 CELSR3Q9NYQ7 3312 aa3.73□□□□□ -1.81
HMGB4-202ENST00000458277 CHD6Q8TD26 2715 aa3.72□□□□□ -1.81
HMGB4-202ENST00000458277 ANKRD11Q6UB99 2663 aaPredicted RBP3.72□□□□□ -1.81
HMGB4-202ENST00000458277 IGLV7-46A0A075B6I9 117 aa3.72□□□□□ -1.81
HMGB4-202ENST00000458277 IGHV3OR16-8A0A075B7F1 116 aa3.72□□□□□ -1.81
HMGB4-202ENST00000458277 IGHV4-61A0A0C4DH41 118 aa3.72□□□□□ -1.81
HMGB4-202ENST00000458277 H0Y9P7 68 aa3.72□□□□□ -1.81
HMGB4-202ENST00000458277 IGHV4-30-4P0DP06 118 aa3.72□□□□□ -1.81
HMGB4-202ENST00000458277 Q8N9W7 124 aa3.72□□□□□ -1.81
HMGB4-202ENST00000458277 LOC400499M0QZD8 3231 aa3.72□□□□□ -1.81
HMGB4-202ENST00000458277 LAMA5O15230 3695 aa3.72□□□□□ -1.81
HMGB4-202ENST00000458277 PKD1L2Q7Z442 2459 aa3.71□□□□□ -1.81
HMGB4-202ENST00000458277 PTPRQQ9UMZ3 2332 aa3.71□□□□□ -1.82
HMGB4-202ENST00000458277 KALRNO60229 2985 aa3.71□□□□□ -1.82
HMGB4-202ENST00000458277 ATMQ13315 3056 aa3.71□□□□□ -1.82
HMGB4-202ENST00000458277 IGSF10Q6WRI0 2623 aa3.71□□□□□ -1.82
HMGB4-202ENST00000458277 DOCK10Q96BY6 2186 aa3.71□□□□□ -1.82
HMGB4-202ENST00000458277 IGHV3OR16-13A0A075B7E8 117 aa3.71□□□□□ -1.82
HMGB4-202ENST00000458277 IGHV3-74A0A0B4J1X5 117 aa3.71□□□□□ -1.82
HMGB4-202ENST00000458277 IGLV6-57P01721 117 aa3.71□□□□□ -1.82
HMGB4-202ENST00000458277 ATP1A1-AS1Q5TC04 95 aa3.71□□□□□ -1.82
HMGB4-202ENST00000458277 SPAG11AQ6PDA7 123 aa3.71□□□□□ -1.82
HMGB4-202ENST00000458277 COA5Q86WW8 74 aa3.71□□□□□ -1.82
HMGB4-202ENST00000458277 CFAP46Q8IYW2 2715 aa3.71□□□□□ -1.82
HMGB4-202ENST00000458277 TPRP12270 2363 aaKnown RBP3.7□□□□□ -1.82
HMGB4-202ENST00000458277 NAV3Q8IVL0 2385 aa3.7□□□□□ -1.82
HMGB4-202ENST00000458277 MGAQ8IWI9 3026 aa3.7□□□□□ -1.82
HMGB4-202ENST00000458277 TRGV4A0A0C4DH28 118 aa3.7□□□□□ -1.82
HMGB4-202ENST00000458277 MAP1BP46821 2468 aaKnown RBP3.7□□□□□ -1.82
HMGB4-202ENST00000458277 SPTA1P02549 2419 aa3.7□□□□□ -1.82
HMGB4-202ENST00000458277 URB1O60287 2271 aaKnown RBP3.69□□□□□ -1.82
HMGB4-202ENST00000458277 MUC4Q99102 2169 aa3.69□□□□□ -1.82
HMGB4-202ENST00000458277 CNTRLQ7Z7A1 2325 aa3.69□□□□□ -1.82
HMGB4-202ENST00000458277 A0A0A0MQY5 61 aa3.69□□□□□ -1.82
HMGB4-202ENST00000458277 A8MTW9 85 aa3.69□□□□□ -1.82
HMGB4-202ENST00000458277 A8MU10 97 aa3.69□□□□□ -1.82
HMGB4-202ENST00000458277 M0R2N4 97 aa3.69□□□□□ -1.82
HMGB4-202ENST00000458277 RTL8CO15255 209 aa3.69□□□□□ -1.82
HMGB4-202ENST00000458277 DEFB112Q30KQ8 113 aa3.69□□□□□ -1.82
HMGB4-202ENST00000458277 DEFB109BQ30KR1 87 aa3.69□□□□□ -1.82
HMGB4-202ENST00000458277 C11orf71Q6IPW1 123 aa3.69□□□□□ -1.82
HMGB4-202ENST00000458277 IGLV5-48A0A075B6I7 105 aa3.68□□□□□ -1.82
HMGB4-202ENST00000458277 PROK1P58294 105 aa3.68□□□□□ -1.82
HMGB4-202ENST00000458277 KPRPQ5T749 579 aaPredicted RBP3.68□□□□□ -1.82
HMGB4-202ENST00000458277 C9orf163Q8N9P6 203 aa3.68□□□□□ -1.82
HMGB4-202ENST00000458277 Q8NAQ8 132 aa3.68□□□□□ -1.82
HMGB4-202ENST00000458277 ZNF702PQ9H963 129 aa3.68□□□□□ -1.82
HMGB4-202ENST00000458277 TLN1Q9Y490 2541 aaKnown RBP3.68□□□□□ -1.82
HMGB4-202ENST00000458277 IGLV1-51P01701 117 aa3.67□□□□□ -1.82
HMGB4-202ENST00000458277 SPINK13Q1W4C9 94 aa3.67□□□□□ -1.82
HMGB4-202ENST00000458277 ODF3L2Q3SX64 289 aa3.67□□□□□ -1.82
HMGB4-202ENST00000458277 Q8N9L7 120 aa3.67□□□□□ -1.82
HMGB4-202ENST00000458277 FAM215AQ9Y5M1 114 aa3.67□□□□□ -1.82
HMGB4-202ENST00000458277 MED13Q9UHV7 2174 aa3.67□□□□□ -1.82
HMGB4-202ENST00000458277 BOD1L1Q8NFC6 3051 aa3.67□□□□□ -1.82
HMGB4-202ENST00000458277 PLXNB1O43157 2135 aa3.67□□□□□ -1.82
HMGB4-202ENST00000458277 ZFYVE26Q68DK2 2539 aa3.66□□□□□ -1.82
HMGB4-202ENST00000458277 A0A1B0GUV1 79 aa3.66□□□□□ -1.82
HMGB4-202ENST00000458277 INSP01308 110 aa3.66□□□□□ -1.82
HMGB4-202ENST00000458277 DSCR9P59020 149 aa3.66□□□□□ -1.82
HMGB4-202ENST00000458277 PRB3Q04118 309 aaPredicted RBP3.66□□□□□ -1.82
HMGB4-202ENST00000458277 PRR4Q16378 134 aa3.66□□□□□ -1.82
HMGB4-202ENST00000458277 LINC00612Q8N6U2 182 aa3.66□□□□□ -1.82
HMGB4-202ENST00000458277 SPRR4Q96PI1 79 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms