RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 NDUFC2-KCTD14E9PQ53 114 aa5.85□□□□□ -1.47
CDC42EP3-204ENST00000457889 NDUFC2O95298 119 aa5.85□□□□□ -1.47
CDC42EP3-204ENST00000457889 LY6G6CO95867 125 aa5.85□□□□□ -1.47
CDC42EP3-204ENST00000457889 TLX1NBP0CAT3 122 aa5.85□□□□□ -1.47
CDC42EP3-204ENST00000457889 C10orf25Q5T742 122 aa5.85□□□□□ -1.47
CDC42EP3-204ENST00000457889 Q6ZRU5 148 aa5.85□□□□□ -1.47
CDC42EP3-204ENST00000457889 DAND5Q8N907 189 aa5.85□□□□□ -1.47
CDC42EP3-204ENST00000457889 RAB37Q96AX2 223 aa5.85□□□□□ -1.47
CDC42EP3-204ENST00000457889 PLECQ15149 4684 aaKnown RBP5.85□□□□□ -1.47
CDC42EP3-204ENST00000457889 VPS13DQ5THJ4 4388 aa5.84□□□□□ -1.47
CDC42EP3-204ENST00000457889 A0A0U1RRA0 63 aa5.84□□□□□ -1.47
CDC42EP3-204ENST00000457889 CFC1BP0CG36 223 aa5.84□□□□□ -1.47
CDC42EP3-204ENST00000457889 CFC1P0CG37 223 aa5.84□□□□□ -1.47
CDC42EP3-204ENST00000457889 KRTAP19-4Q3LI73 84 aa5.84□□□□□ -1.47
CDC42EP3-204ENST00000457889 C1orf134Q5TEV5 83 aa5.84□□□□□ -1.47
CDC42EP3-204ENST00000457889 SND1-IT1Q9HBX3 110 aa5.84□□□□□ -1.47
CDC42EP3-204ENST00000457889 PRO1854Q9UHT4 67 aa5.84□□□□□ -1.47
CDC42EP3-204ENST00000457889 TRAV13-2A0A0B4J235 113 aa5.83□□□□□ -1.48
CDC42EP3-204ENST00000457889 SOSTDC1Q6X4U4 206 aa5.83□□□□□ -1.48
CDC42EP3-204ENST00000457889 LINC00526Q96FQ7 95 aa5.83□□□□□ -1.48
CDC42EP3-204ENST00000457889 LRCOL1A6NCL2 159 aa5.82□□□□□ -1.48
CDC42EP3-204ENST00000457889 C9orf118A6NHY6 69 aa5.82□□□□□ -1.48
CDC42EP3-204ENST00000457889 TAX1BP3O14907 124 aa5.82□□□□□ -1.48
CDC42EP3-204ENST00000457889 C9orf116Q5BN46 136 aaPredicted RBP5.82□□□□□ -1.48
CDC42EP3-204ENST00000457889 LYRM7Q5U5X0 104 aa5.82□□□□□ -1.48
CDC42EP3-204ENST00000457889 TRBV10-2A0A0K0K1G8 114 aa5.81□□□□□ -1.48
CDC42EP3-204ENST00000457889 LOC107984640A0A0U1RRK4 108 aa5.81□□□□□ -1.48
CDC42EP3-204ENST00000457889 K7ERJ3 54 aa5.81□□□□□ -1.48
CDC42EP3-204ENST00000457889 M0R2N4 97 aa5.81□□□□□ -1.48
CDC42EP3-204ENST00000457889 NPC2P61916 151 aa5.81□□□□□ -1.48
CDC42EP3-204ENST00000457889 KRTAP9-3Q9BYQ3 159 aa5.81□□□□□ -1.48
CDC42EP3-204ENST00000457889 ALMS1Q8TCU4 4167 aa5.81□□□□□ -1.48
CDC42EP3-204ENST00000457889 DNAH1Q9P2D7 4330 aa5.8□□□□□ -1.48
CDC42EP3-204ENST00000457889 DNAH6Q9C0G6 4158 aa5.8□□□□□ -1.48
CDC42EP3-204ENST00000457889 LECT2O14960 151 aa5.8□□□□□ -1.48
CDC42EP3-204ENST00000457889 WFDC2Q14508 124 aa5.8□□□□□ -1.48
CDC42EP3-204ENST00000457889 Q8N814 137 aa5.8□□□□□ -1.48
CDC42EP3-204ENST00000457889 CBY1Q9Y3M2 126 aa5.8□□□□□ -1.48
CDC42EP3-204ENST00000457889 A0A087WTM6 91 aa5.79□□□□□ -1.48
CDC42EP3-204ENST00000457889 SLPIP03973 132 aa5.79□□□□□ -1.48
CDC42EP3-204ENST00000457889 FABP2P12104 132 aa5.79□□□□□ -1.48
CDC42EP3-204ENST00000457889 LYSTQ99698 3801 aa5.79□□□□□ -1.48
CDC42EP3-204ENST00000457889 PLA2G2DQ9UNK4 145 aa5.79□□□□□ -1.48
CDC42EP3-204ENST00000457889 LCE6AA0A183 80 aa5.78□□□□□ -1.48
CDC42EP3-204ENST00000457889 TSPAN13O95857 204 aa5.78□□□□□ -1.48
CDC42EP3-204ENST00000457889 RPL13AP40429 203 aaKnown RBP5.78□□□□□ -1.48
CDC42EP3-204ENST00000457889 Q6ZRP5 223 aa5.78□□□□□ -1.48
CDC42EP3-204ENST00000457889 C9orf163Q8N9P6 203 aa5.78□□□□□ -1.48
CDC42EP3-204ENST00000457889 TMEM126AQ9H061 195 aa5.78□□□□□ -1.48
CDC42EP3-204ENST00000457889 LINC00474Q9P2X8 69 aa5.78□□□□□ -1.48
CDC42EP3-204ENST00000457889 IGKV2-28A0A075B6P5 120 aa5.77□□□□□ -1.49
CDC42EP3-204ENST00000457889 A0A1W2PPM0 123 aa5.77□□□□□ -1.49
CDC42EP3-204ENST00000457889 C16orf90A8MZG2 172 aa5.77□□□□□ -1.49
CDC42EP3-204ENST00000457889 H3BUT2 72 aa5.77□□□□□ -1.49
CDC42EP3-204ENST00000457889 IGKV2D-28P01615 120 aa5.77□□□□□ -1.49
CDC42EP3-204ENST00000457889 COX6CP09669 75 aa5.77□□□□□ -1.49
CDC42EP3-204ENST00000457889 RPL18AQ02543 176 aaKnown RBP5.77□□□□□ -1.49
CDC42EP3-204ENST00000457889 Q1RN00 199 aa5.77□□□□□ -1.49
CDC42EP3-204ENST00000457889 KRTAP17-1Q9BYP8 105 aa5.77□□□□□ -1.49
CDC42EP3-204ENST00000457889 IGLV5-37A0A075B6J1 123 aa5.76□□□□□ -1.49
CDC42EP3-204ENST00000457889 TRBV20-1A0A075B6N2 111 aa5.76□□□□□ -1.49
CDC42EP3-204ENST00000457889 GAGE2EQ4V326 116 aa5.76□□□□□ -1.49
CDC42EP3-204ENST00000457889 GTF2H5Q6ZYL4 71 aa5.76□□□□□ -1.49
CDC42EP3-204ENST00000457889 LINC00337Q8N6G1 96 aa5.76□□□□□ -1.49
CDC42EP3-204ENST00000457889 XAGE1AQ9HD64 81 aa5.76□□□□□ -1.49
CDC42EP3-204ENST00000457889 GAGE2DQ9UEU5 116 aa5.76□□□□□ -1.49
CDC42EP3-204ENST00000457889 M0R378 163 aa5.75□□□□□ -1.49
CDC42EP3-204ENST00000457889 VPREB1P12018 145 aa5.75□□□□□ -1.49
CDC42EP3-204ENST00000457889 RPL28P46779 137 aaKnown RBP5.75□□□□□ -1.49
CDC42EP3-204ENST00000457889 PSMB2P49721 201 aa5.75□□□□□ -1.49
CDC42EP3-204ENST00000457889 VAMP3Q15836 100 aa5.75□□□□□ -1.49
CDC42EP3-204ENST00000457889 S100A7L2Q5SY68 101 aa5.75□□□□□ -1.49
CDC42EP3-204ENST00000457889 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.74□□□□□ -1.49
CDC42EP3-204ENST00000457889 A0A1B0GV90 55 aa5.74□□□□□ -1.49
CDC42EP3-204ENST00000457889 IGLV6-57P01721 117 aa5.74□□□□□ -1.49
CDC42EP3-204ENST00000457889 C9orf129Q5T035 196 aaKnown RBP5.74□□□□□ -1.49
CDC42EP3-204ENST00000457889 NKAPP1Q8N9T2 125 aa5.74□□□□□ -1.49
CDC42EP3-204ENST00000457889 H7C2G1 150 aa5.73□□□□□ -1.49
CDC42EP3-204ENST00000457889 K7EP34 96 aa5.73□□□□□ -1.49
CDC42EP3-204ENST00000457889 TRIAP1O43715 76 aa5.73□□□□□ -1.49
CDC42EP3-204ENST00000457889 GAGE2BQ13066 116 aa5.73□□□□□ -1.49
CDC42EP3-204ENST00000457889 C21orf62-AS1Q17RA5 79 aa5.73□□□□□ -1.49
CDC42EP3-204ENST00000457889 OR13C6PQ8NH95 151 aa5.73□□□□□ -1.49
CDC42EP3-204ENST00000457889 SPCS1Q9Y6A9 102 aa5.73□□□□□ -1.49
CDC42EP3-204ENST00000457889 GAGE10A6NGK3 116 aa5.72□□□□□ -1.49
CDC42EP3-204ENST00000457889 H0YGX0 51 aa5.72□□□□□ -1.49
CDC42EP3-204ENST00000457889 NCR3O14931 201 aa5.72□□□□□ -1.49
CDC42EP3-204ENST00000457889 RTL8CO15255 209 aa5.72□□□□□ -1.49
CDC42EP3-204ENST00000457889 SCGB1C2P0DMR2 95 aa5.72□□□□□ -1.49
CDC42EP3-204ENST00000457889 SDIM1Q6ZPB5 146 aa5.72□□□□□ -1.49
CDC42EP3-204ENST00000457889 LINC00336Q6ZUF6 198 aa5.72□□□□□ -1.49
CDC42EP3-204ENST00000457889 A0A096LNI7 61 aa5.71□□□□□ -1.5
CDC42EP3-204ENST00000457889 IGLV5-52A0A0A0MRZ9 124 aa5.71□□□□□ -1.5
CDC42EP3-204ENST00000457889 TRBV7-6A0A0J9YX20 115 aa5.71□□□□□ -1.5
CDC42EP3-204ENST00000457889 H3BS24 57 aa5.71□□□□□ -1.5
CDC42EP3-204ENST00000457889 Q8NDZ9 215 aa5.71□□□□□ -1.5
CDC42EP3-204ENST00000457889 SMIM11BQ8TCY0 68 aa5.71□□□□□ -1.5
CDC42EP3-204ENST00000457889 NAA38Q9BRA0 125 aaKnown RBP5.71□□□□□ -1.5
CDC42EP3-204ENST00000457889 KMT2AQ03164 3969 aa5.71□□□□□ -1.5
CDC42EP3-204ENST00000457889 TRAV23DV6A0A075B6W5 121 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms