RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 SRSF9Q13242 221 aaKnown RBP eCLIP5.65□□□□□ -1.5
RIF1-208ENST00000457745 KRTAP19-4Q3LI73 84 aa5.65□□□□□ -1.5
RIF1-208ENST00000457745 KRTAP7-1Q8IUC3 87 aa5.65□□□□□ -1.5
RIF1-208ENST00000457745 NHP2Q9NX24 153 aaKnown RBP5.65□□□□□ -1.5
RIF1-208ENST00000457745 RYR2Q92736 4967 aa5.64□□□□□ -1.51
RIF1-208ENST00000457745 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.64□□□□□ -1.51
RIF1-208ENST00000457745 IGKV2-28A0A075B6P5 120 aa5.64□□□□□ -1.51
RIF1-208ENST00000457745 A0A1B0GWB2 263 aa5.64□□□□□ -1.51
RIF1-208ENST00000457745 TMEM238C9JI98 176 aa5.64□□□□□ -1.51
RIF1-208ENST00000457745 IGKV2D-28P01615 120 aa5.64□□□□□ -1.51
RIF1-208ENST00000457745 CXCL5P42830 114 aa5.64□□□□□ -1.51
RIF1-208ENST00000457745 SYCNQ0VAF6 134 aa5.64□□□□□ -1.51
RIF1-208ENST00000457745 TTC32Q5I0X7 151 aa5.64□□□□□ -1.51
RIF1-208ENST00000457745 RMI2Q96E14 147 aa5.64□□□□□ -1.51
RIF1-208ENST00000457745 C2orf48Q96LS8 159 aa5.64□□□□□ -1.51
RIF1-208ENST00000457745 SND1-IT1Q9HBX3 110 aa5.64□□□□□ -1.51
RIF1-208ENST00000457745 A0A1B0GV90 55 aa5.63□□□□□ -1.51
RIF1-208ENST00000457745 ZNF561-AS1K7EIQ3 104 aa5.63□□□□□ -1.51
RIF1-208ENST00000457745 C9orf129Q5T035 196 aaKnown RBP5.63□□□□□ -1.51
RIF1-208ENST00000457745 Q6ZRP5 223 aa5.63□□□□□ -1.51
RIF1-208ENST00000457745 RAB37Q96AX2 223 aa5.63□□□□□ -1.51
RIF1-208ENST00000457745 XAGE1AQ9HD64 81 aa5.63□□□□□ -1.51
RIF1-208ENST00000457745 DNAH11Q96DT5 4516 aa5.62□□□□□ -1.51
RIF1-208ENST00000457745 A0A087WTM6 91 aa5.62□□□□□ -1.51
RIF1-208ENST00000457745 PANO1I0J062 215 aa5.62□□□□□ -1.51
RIF1-208ENST00000457745 PTTG1IPP53801 180 aa5.62□□□□□ -1.51
RIF1-208ENST00000457745 CARD19Q96LW7 228 aa5.62□□□□□ -1.51
RIF1-208ENST00000457745 TRBV30A0A0K0K1B3 111 aa5.61□□□□□ -1.51
RIF1-208ENST00000457745 LCE6AA0A183 80 aa5.61□□□□□ -1.51
RIF1-208ENST00000457745 FAM168BA1KXE4 195 aa5.61□□□□□ -1.51
RIF1-208ENST00000457745 PSCAO43653 123 aa5.61□□□□□ -1.51
RIF1-208ENST00000457745 LINC00337Q8N6G1 96 aa5.61□□□□□ -1.51
RIF1-208ENST00000457745 TSPAN13O95857 204 aa5.6□□□□□ -1.51
RIF1-208ENST00000457745 CHTF8P0CG12 524 aa5.6□□□□□ -1.51
RIF1-208ENST00000457745 GAGE2EQ4V326 116 aa5.6□□□□□ -1.51
RIF1-208ENST00000457745 C1orf134Q5TEV5 83 aa5.6□□□□□ -1.51
RIF1-208ENST00000457745 SERTAD4-AS1Q5TG53 156 aa5.6□□□□□ -1.51
RIF1-208ENST00000457745 Q8N814 137 aa5.6□□□□□ -1.51
RIF1-208ENST00000457745 GAGE2DQ9UEU5 116 aa5.6□□□□□ -1.51
RIF1-208ENST00000457745 A0A096LNI7 61 aa5.59□□□□□ -1.51
RIF1-208ENST00000457745 LOC107984156A0A0G2JMH3 177 aa5.59□□□□□ -1.51
RIF1-208ENST00000457745 NCR3O14931 201 aa5.59□□□□□ -1.51
RIF1-208ENST00000457745 IFITM1P13164 125 aa5.59□□□□□ -1.51
RIF1-208ENST00000457745 KRTAP10-2P60368 255 aa5.59□□□□□ -1.51
RIF1-208ENST00000457745 CNBPP62633 177 aaKnown RBP5.59□□□□□ -1.51
RIF1-208ENST00000457745 COL5A1-AS1Q5SY13 56 aa5.59□□□□□ -1.51
RIF1-208ENST00000457745 SFTA2Q6UW10 78 aa5.59□□□□□ -1.51
RIF1-208ENST00000457745 ARL17AQ8IVW1 177 aa5.59□□□□□ -1.51
RIF1-208ENST00000457745 KRTAP17-1Q9BYP8 105 aa5.59□□□□□ -1.51
RIF1-208ENST00000457745 COX11Q9Y6N1 276 aa5.59□□□□□ -1.51
RIF1-208ENST00000457745 FAT2Q9NYQ8 4349 aa5.58□□□□□ -1.52
RIF1-208ENST00000457745 A0A0B4J2C4 111 aa5.58□□□□□ -1.52
RIF1-208ENST00000457745 NDUFC2-KCTD14E9PQ53 114 aa5.58□□□□□ -1.52
RIF1-208ENST00000457745 VPREB1P12018 145 aa5.58□□□□□ -1.52
RIF1-208ENST00000457745 CIRBPQ14011 172 aaKnown RBP5.58□□□□□ -1.52
RIF1-208ENST00000457745 PLA2G2DQ9UNK4 145 aa5.58□□□□□ -1.52
RIF1-208ENST00000457745 FRAS1Q86XX4 4008 aa5.58□□□□□ -1.52
RIF1-208ENST00000457745 KRTAP9-7A8MTY7 169 aa5.57□□□□□ -1.52
RIF1-208ENST00000457745 H3BUT2 72 aa5.57□□□□□ -1.52
RIF1-208ENST00000457745 H7C2G1 150 aa5.57□□□□□ -1.52
RIF1-208ENST00000457745 TLX1NBP0CAT3 122 aa5.57□□□□□ -1.52
RIF1-208ENST00000457745 RPL13AP40429 203 aaKnown RBP5.57□□□□□ -1.52
RIF1-208ENST00000457745 RPL24P83731 157 aaKnown RBP5.57□□□□□ -1.52
RIF1-208ENST00000457745 RPL18AQ02543 176 aaKnown RBP5.57□□□□□ -1.52
RIF1-208ENST00000457745 GAGE2BQ13066 116 aa5.57□□□□□ -1.52
RIF1-208ENST00000457745 COX17Q14061 63 aa5.57□□□□□ -1.52
RIF1-208ENST00000457745 RNF151Q2KHN1 245 aa5.57□□□□□ -1.52
RIF1-208ENST00000457745 A0A1W2PNN7 141 aa5.56□□□□□ -1.52
RIF1-208ENST00000457745 A6NDN8 102 aa5.56□□□□□ -1.52
RIF1-208ENST00000457745 C9orf118A6NHY6 69 aa5.56□□□□□ -1.52
RIF1-208ENST00000457745 F8WDY8 70 aa5.56□□□□□ -1.52
RIF1-208ENST00000457745 SDIM1Q6ZPB5 146 aa5.56□□□□□ -1.52
RIF1-208ENST00000457745 KRTAP11-1Q8IUC1 163 aa5.56□□□□□ -1.52
RIF1-208ENST00000457745 PPDPFQ9H3Y8 114 aa5.56□□□□□ -1.52
RIF1-208ENST00000457745 KMT2CQ8NEZ4 4911 aaKnown RBP5.56□□□□□ -1.52
RIF1-208ENST00000457745 IGKV2-24A0A0C4DH68 120 aa5.55□□□□□ -1.52
RIF1-208ENST00000457745 C9orf163Q8N9P6 203 aa5.55□□□□□ -1.52
RIF1-208ENST00000457745 PRO1854Q9UHT4 67 aa5.55□□□□□ -1.52
RIF1-208ENST00000457745 DNAH5Q8TE73 4624 aa5.55□□□□□ -1.52
RIF1-208ENST00000457745 TRIAP1O43715 76 aa5.54□□□□□ -1.52
RIF1-208ENST00000457745 LCE5AQ5TCM9 118 aa5.54□□□□□ -1.52
RIF1-208ENST00000457745 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.53□□□□□ -1.52
RIF1-208ENST00000457745 LOC107984640A0A0U1RRK4 108 aa5.53□□□□□ -1.52
RIF1-208ENST00000457745 GAGE10A6NGK3 116 aa5.53□□□□□ -1.52
RIF1-208ENST00000457745 NDUFC2O95298 119 aa5.53□□□□□ -1.52
RIF1-208ENST00000457745 FAM19A5Q7Z5A7 132 aaPredicted RBP5.53□□□□□ -1.52
RIF1-208ENST00000457745 C7orf33Q8WU49 177 aa5.53□□□□□ -1.52
RIF1-208ENST00000457745 PKD1P98161 4303 aa5.52□□□□□ -1.53
RIF1-208ENST00000457745 TRBV10-3A0A0K0K1G6 114 aa5.52□□□□□ -1.53
RIF1-208ENST00000457745 A0A1W2PPM0 123 aa5.52□□□□□ -1.53
RIF1-208ENST00000457745 PLA2G1BP04054 148 aaKnown RBP5.52□□□□□ -1.53
RIF1-208ENST00000457745 C14orf177Q52M58 125 aa5.52□□□□□ -1.53
RIF1-208ENST00000457745 LBHQ53QV2 105 aaPredicted RBP5.52□□□□□ -1.53
RIF1-208ENST00000457745 SMIM11BQ8TCY0 68 aa5.52□□□□□ -1.53
RIF1-208ENST00000457745 FAM218AQ96MZ4 157 aa5.52□□□□□ -1.53
RIF1-208ENST00000457745 C16orf90A8MZG2 172 aa5.51□□□□□ -1.53
RIF1-208ENST00000457745 KRTAP10-1P60331 282 aa5.51□□□□□ -1.53
RIF1-208ENST00000457745 HAMPP81172 84 aa5.51□□□□□ -1.53
RIF1-208ENST00000457745 CLEC2BQ92478 149 aa5.51□□□□□ -1.53
RIF1-208ENST00000457745 FAM30AQ9NZY2 134 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms