RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 OBSCN-AS1Q96MR7 158 aa12.44□□□□□ -0.42
SEMA3B-209ENST00000456560 KLK12Q9UKR0 248 aa12.44□□□□□ -0.42
SEMA3B-209ENST00000456560 PKD1L1Q8TDX9 2849 aa12.43□□□□□ -0.42
SEMA3B-209ENST00000456560 HIST1H4AP62805 103 aaKnown RBP12.43□□□□□ -0.42
SEMA3B-209ENST00000456560 IGKV3D-7A0A0C4DH55 119 aa12.42□□□□□ -0.42
SEMA3B-209ENST00000456560 NCR3O14931 201 aa12.42□□□□□ -0.42
SEMA3B-209ENST00000456560 SLPIP03973 132 aa12.42□□□□□ -0.42
SEMA3B-209ENST00000456560 LINC00846Q9NV44 126 aa12.42□□□□□ -0.42
SEMA3B-209ENST00000456560 ATOX1O00244 68 aa12.42□□□□□ -0.42
SEMA3B-209ENST00000456560 SPAG11BQ08648 103 aa12.42□□□□□ -0.42
SEMA3B-209ENST00000456560 C10orf25Q5T742 122 aa12.42□□□□□ -0.42
SEMA3B-209ENST00000456560 C6orf223Q8N319 242 aa12.42□□□□□ -0.42
SEMA3B-209ENST00000456560 UNQ6190/PRO20217Q6UXQ8 127 aa12.41□□□□□ -0.42
SEMA3B-209ENST00000456560 RETNQ9HD89 108 aa12.41□□□□□ -0.42
SEMA3B-209ENST00000456560 Q6JHZ5 121 aa12.41□□□□□ -0.42
SEMA3B-209ENST00000456560 C2orf48Q96LS8 159 aa12.41□□□□□ -0.42
SEMA3B-209ENST00000456560 MDFIQ99750 246 aa12.41□□□□□ -0.42
SEMA3B-209ENST00000456560 A0A0J9YWU9 116 aa12.4□□□□□ -0.42
SEMA3B-209ENST00000456560 H3BNG1 76 aa12.4□□□□□ -0.42
SEMA3B-209ENST00000456560 Q8NDZ9 215 aa12.4□□□□□ -0.42
SEMA3B-209ENST00000456560 MUC7Q8TAX7 377 aa12.39□□□□□ -0.43
SEMA3B-209ENST00000456560 ORMDL1Q9P0S3 153 aa12.39□□□□□ -0.43
SEMA3B-209ENST00000456560 LINC00167Q96N53 147 aa12.38□□□□□ -0.43
SEMA3B-209ENST00000456560 CMYA5Q8N3K9 4069 aa12.38□□□□□ -0.43
SEMA3B-209ENST00000456560 RPL18AQ02543 176 aaKnown RBP12.38□□□□□ -0.43
SEMA3B-209ENST00000456560 EGFEM1PQ0D2K5 195 aa12.38□□□□□ -0.43
SEMA3B-209ENST00000456560 KPRPQ5T749 579 aaPredicted RBP12.37□□□□□ -0.43
SEMA3B-209ENST00000456560 A0A1B0GX51 115 aa12.36□□□□□ -0.43
SEMA3B-209ENST00000456560 CRYGAP11844 174 aa12.36□□□□□ -0.43
SEMA3B-209ENST00000456560 ANK2Q01484 3957 aa12.35□□□□□ -0.43
SEMA3B-209ENST00000456560 GVQW2A0A096LPI5 108 aaPredicted RBP12.35□□□□□ -0.43
SEMA3B-209ENST00000456560 A0A087WVE0 104 aa12.34□□□□□ -0.43
SEMA3B-209ENST00000456560 Q6ZTC4 211 aa12.34□□□□□ -0.43
SEMA3B-209ENST00000456560 WFDC10BQ8IUB3 73 aa12.34□□□□□ -0.43
SEMA3B-209ENST00000456560 Q8N814 137 aa12.33□□□□□ -0.44
SEMA3B-209ENST00000456560 hADV29S1A0JD25 119 aa12.33□□□□□ -0.44
SEMA3B-209ENST00000456560 CCKP06307 115 aa12.32□□□□□ -0.44
SEMA3B-209ENST00000456560 KRTAP26-1Q6PEX3 210 aa12.31□□□□□ -0.44
SEMA3B-209ENST00000456560 C6orf48Q9UBA6 75 aa12.31□□□□□ -0.44
SEMA3B-209ENST00000456560 LOC107984640A0A0U1RRK4 108 aa12.29□□□□□ -0.44
SEMA3B-209ENST00000456560 C6orf99Q4VX62 202 aa12.29□□□□□ -0.44
SEMA3B-209ENST00000456560 S100A7L2Q5SY68 101 aa12.29□□□□□ -0.44
SEMA3B-209ENST00000456560 USP17L23D6RBM5 183 aa12.29□□□□□ -0.44
SEMA3B-209ENST00000456560 SERP2Q8N6R1 65 aa12.29□□□□□ -0.44
SEMA3B-209ENST00000456560 JMJD7-PLA2G4BH0Y9G9 81 aa12.28□□□□□ -0.44
SEMA3B-209ENST00000456560 J3KT08 172 aa12.27□□□□□ -0.44
SEMA3B-209ENST00000456560 IGLV6-57P01721 117 aa12.27□□□□□ -0.44
SEMA3B-209ENST00000456560 ESRGQ1W209 222 aa12.27□□□□□ -0.44
SEMA3B-209ENST00000456560 CYSTM1Q9H1C7 97 aa12.27□□□□□ -0.45
SEMA3B-209ENST00000456560 TMEM256-PLSCR3K7ERE1 68 aa12.26□□□□□ -0.45
SEMA3B-209ENST00000456560 LINC00575Q6W349 94 aa12.26□□□□□ -0.45
SEMA3B-209ENST00000456560 NOTCH1P46531 2555 aa12.25□□□□□ -0.45
SEMA3B-209ENST00000456560 UPK3BQ9BT76 320 aa12.23□□□□□ -0.45
SEMA3B-209ENST00000456560 ZNF561-AS1K7EIQ3 104 aa12.22□□□□□ -0.45
SEMA3B-209ENST00000456560 HIGD2BQ4VC39 106 aa12.22□□□□□ -0.45
SEMA3B-209ENST00000456560 C15orf56Q8N910 161 aa12.22□□□□□ -0.45
SEMA3B-209ENST00000456560 XAGE1AQ9HD64 81 aa12.22□□□□□ -0.45
SEMA3B-209ENST00000456560 DEFB131BA0A096LNP1 70 aa12.21□□□□□ -0.45
SEMA3B-209ENST00000456560 C11orf45Q8TAV5 145 aa12.21□□□□□ -0.45
SEMA3B-209ENST00000456560 CAMK2N2Q96S95 79 aa12.21□□□□□ -0.45
SEMA3B-209ENST00000456560 MGAM2Q2M2H8 2515 aa12.21□□□□□ -0.45
SEMA3B-209ENST00000456560 LINC01556Q5JQF7 62 aa12.21□□□□□ -0.46
SEMA3B-209ENST00000456560 ATP5EP2Q5VTU8 51 aa12.21□□□□□ -0.46
SEMA3B-209ENST00000456560 TMEM258P61165 79 aa12.19□□□□□ -0.46
SEMA3B-209ENST00000456560 NBEAL1Q6ZS30 2694 aa12.19□□□□□ -0.46
SEMA3B-209ENST00000456560 TRBV10-3A0A0K0K1G6 114 aa12.19□□□□□ -0.46
SEMA3B-209ENST00000456560 DNHD1Q96M86 4753 aa12.18□□□□□ -0.46
SEMA3B-209ENST00000456560 RPS28P62857 69 aaKnown RBP12.18□□□□□ -0.46
SEMA3B-209ENST00000456560 Q6ZRU5 148 aa12.18□□□□□ -0.46
SEMA3B-209ENST00000456560 PRB2P02812 416 aaPredicted RBP12.18□□□□□ -0.46
SEMA3B-209ENST00000456560 DNAH3Q8TD57 4116 aa12.17□□□□□ -0.46
SEMA3B-209ENST00000456560 FAM19A5Q7Z5A7 132 aaPredicted RBP12.17□□□□□ -0.46
SEMA3B-209ENST00000456560 TRAV23DV6A0A075B6W5 121 aa12.17□□□□□ -0.46
SEMA3B-209ENST00000456560 FAM19A1Q7Z5A9 133 aa12.17□□□□□ -0.46
SEMA3B-209ENST00000456560 UBL5Q9BZL1 73 aa12.17□□□□□ -0.46
SEMA3B-209ENST00000456560 VPREB1P12018 145 aa12.16□□□□□ -0.46
SEMA3B-209ENST00000456560 C1orf43Q9BWL3 253 aa12.16□□□□□ -0.46
SEMA3B-209ENST00000456560 TENM3Q9P273 2699 aa12.15□□□□□ -0.46
SEMA3B-209ENST00000456560 GHRHP01286 108 aa12.15□□□□□ -0.46
SEMA3B-209ENST00000456560 DPH3Q96FX2 82 aa12.14□□□□□ -0.47
SEMA3B-209ENST00000456560 F8WDY8 70 aa12.13□□□□□ -0.47
SEMA3B-209ENST00000456560 DIRC1Q969H9 104 aa12.13□□□□□ -0.47
SEMA3B-209ENST00000456560 NDUFC2-KCTD14E9PQ53 114 aa12.13□□□□□ -0.47
SEMA3B-209ENST00000456560 IGKV2D-24A0A075B6R9 120 aa12.12□□□□□ -0.47
SEMA3B-209ENST00000456560 DNAH10OSP0CZ25 163 aa12.12□□□□□ -0.47
SEMA3B-209ENST00000456560 RBM3P98179 157 aaKnown RBP12.12□□□□□ -0.47
SEMA3B-209ENST00000456560 ZNF73O43830 326 aaPredicted RBP12.11□□□□□ -0.47
SEMA3B-209ENST00000456560 M0R378 163 aa12.11□□□□□ -0.47
SEMA3B-209ENST00000456560 LAMTOR3Q9UHA4 124 aa12.11□□□□□ -0.47
SEMA3B-209ENST00000456560 Q6ZQT0 140 aa12.1□□□□□ -0.47
SEMA3B-209ENST00000456560 DSCR8Q96T75 97 aa12.1□□□□□ -0.47
SEMA3B-209ENST00000456560 TRBV7-6A0A0J9YX20 115 aa12.1□□□□□ -0.47
SEMA3B-209ENST00000456560 Q6ZQY7 126 aa12.09□□□□□ -0.47
SEMA3B-209ENST00000456560 COX7BP24311 80 aa12.09□□□□□ -0.47
SEMA3B-209ENST00000456560 H3BQ85 93 aa12.08□□□□□ -0.48
SEMA3B-209ENST00000456560 ELOF1P60002 83 aaKnown RBP12.08□□□□□ -0.48
SEMA3B-209ENST00000456560 Q6ZRP5 223 aa12.08□□□□□ -0.48
SEMA3B-209ENST00000456560 LOC110117498A0A087WWA1 95 aa12.07□□□□□ -0.48
SEMA3B-209ENST00000456560 TRAV10A0A0B4J240 114 aa12.07□□□□□ -0.48
SEMA3B-209ENST00000456560 SYCNQ0VAF6 134 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms