RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 COX17Q14061 63 aa9.18□□□□□ -0.94
GPC1-206ENST00000455111 RHEBQ15382 184 aa9.18□□□□□ -0.94
GPC1-206ENST00000455111 BAGE3Q86Y29 109 aa9.18□□□□□ -0.94
GPC1-206ENST00000455111 TPRXLQ17RH7 258 aa9.17□□□□□ -0.94
GPC1-206ENST00000455111 TRAPPC1Q9Y5R8 145 aa9.17□□□□□ -0.94
GPC1-206ENST00000455111 IGKV2D-26A0A0A0MRZ7 120 aa9.16□□□□□ -0.94
GPC1-206ENST00000455111 TMEM170BQ5T4T1 132 aa9.16□□□□□ -0.94
GPC1-206ENST00000455111 A0A0U1RRA0 63 aa9.15□□□□□ -0.94
GPC1-206ENST00000455111 TMEM223A0PJW6 202 aa9.15□□□□□ -0.94
GPC1-206ENST00000455111 RPL24P83731 157 aaKnown RBP9.15□□□□□ -0.94
GPC1-206ENST00000455111 CBLN2Q8IUK8 224 aa9.15□□□□□ -0.94
GPC1-206ENST00000455111 YPEL4Q96NS1 127 aa9.15□□□□□ -0.94
GPC1-206ENST00000455111 SPRR4Q96PI1 79 aa9.15□□□□□ -0.94
GPC1-206ENST00000455111 IGLV7-46A0A075B6I9 117 aa9.14□□□□□ -0.95
GPC1-206ENST00000455111 HIGD2AQ9BW72 106 aa9.14□□□□□ -0.95
GPC1-206ENST00000455111 KRTAP4-16G5E9R7 235 aaPredicted RBP9.13□□□□□ -0.95
GPC1-206ENST00000455111 CHTOPQ9Y3Y2 248 aaKnown RBP9.13□□□□□ -0.95
GPC1-206ENST00000455111 SPRR1AP35321 89 aa9.12□□□□□ -0.95
GPC1-206ENST00000455111 SMIM13P0DJ93 91 aa9.11□□□□□ -0.95
GPC1-206ENST00000455111 LINC00158P58513 81 aa9.11□□□□□ -0.95
GPC1-206ENST00000455111 A0A0U1RQV1 116 aa9.1□□□□□ -0.95
GPC1-206ENST00000455111 DAND5Q8N907 189 aa9.1□□□□□ -0.95
GPC1-206ENST00000455111 CDIP1Q9H305 208 aa9.1□□□□□ -0.95
GPC1-206ENST00000455111 PPDPFQ9H3Y8 114 aa9.1□□□□□ -0.95
GPC1-206ENST00000455111 CTAG1AP78358 180 aa9.09□□□□□ -0.95
GPC1-206ENST00000455111 SMCR5Q8TEV8 140 aa9.09□□□□□ -0.95
GPC1-206ENST00000455111 TRAV12-1A0A0B4J245 112 aa9.08□□□□□ -0.96
GPC1-206ENST00000455111 NCR3O14931 201 aa9.08□□□□□ -0.96
GPC1-206ENST00000455111 KRTAP4-1Q9BYQ7 146 aa9.08□□□□□ -0.96
GPC1-206ENST00000455111 TSPEAR-AS2P59090 65 aa9.07□□□□□ -0.96
GPC1-206ENST00000455111 SFTA2Q6UW10 78 aa9.07□□□□□ -0.96
GPC1-206ENST00000455111 MIR7-3HGQ8N6C7 128 aa9.07□□□□□ -0.96
GPC1-206ENST00000455111 IFI27L1Q96BM0 104 aa9.07□□□□□ -0.96
GPC1-206ENST00000455111 PRYO14603 147 aa9.06□□□□□ -0.96
GPC1-206ENST00000455111 APOC3P02656 99 aa9.06□□□□□ -0.96
GPC1-206ENST00000455111 KCNQ1DNQ9H478 68 aa9.06□□□□□ -0.96
GPC1-206ENST00000455111 ERC2-IT1O76042 136 aa9.05□□□□□ -0.96
GPC1-206ENST00000455111 LINC00310P59036 64 aa9.05□□□□□ -0.96
GPC1-206ENST00000455111 NDUFA5Q16718 116 aa9.05□□□□□ -0.96
GPC1-206ENST00000455111 KRTAP13-3Q3SY46 172 aa9.05□□□□□ -0.96
GPC1-206ENST00000455111 BOD1L2Q8IYS8 172 aa9.05□□□□□ -0.96
GPC1-206ENST00000455111 LINC00337Q8N6G1 96 aa9.05□□□□□ -0.96
GPC1-206ENST00000455111 Q8NBF4 154 aa9.05□□□□□ -0.96
GPC1-206ENST00000455111 TRBV10-3A0A0K0K1G6 114 aa9.04□□□□□ -0.96
GPC1-206ENST00000455111 FAM19A2Q8N3H0 131 aa9.04□□□□□ -0.96
GPC1-206ENST00000455111 LINC00483Q53H64 154 aa9.03□□□□□ -0.96
GPC1-206ENST00000455111 CHCHD1Q96BP2 118 aaKnown RBP9.03□□□□□ -0.96
GPC1-206ENST00000455111 SPAG11AQ6PDA7 123 aa9.02□□□□□ -0.97
GPC1-206ENST00000455111 B5MCH6 92 aa9.01□□□□□ -0.97
GPC1-206ENST00000455111 MEIG1Q5JSS6 88 aa9.01□□□□□ -0.97
GPC1-206ENST00000455111 FP248Q71RG6 208 aaPredicted RBP9□□□□□ -0.97
GPC1-206ENST00000455111 Q9BRP9 147 aa9□□□□□ -0.97
GPC1-206ENST00000455111 NDUFA12Q9UI09 145 aa9□□□□□ -0.97
GPC1-206ENST00000455111 LOC107984156A0A0G2JMH3 177 aa8.99□□□□□ -0.97
GPC1-206ENST00000455111 SNAPINO95295 136 aa8.99□□□□□ -0.97
GPC1-206ENST00000455111 ARL17AQ8IVW1 177 aa8.99□□□□□ -0.97
GPC1-206ENST00000455111 SLC7A5P1Q8MH63 180 aa8.99□□□□□ -0.97
GPC1-206ENST00000455111 EIF4EBP3O60516 100 aaPredicted RBP8.98□□□□□ -0.97
GPC1-206ENST00000455111 HERV-K104P63124 156 aa8.98□□□□□ -0.97
GPC1-206ENST00000455111 SVBPQ8N300 66 aa8.98□□□□□ -0.97
GPC1-206ENST00000455111 ZNF706Q9Y5V0 76 aaPredicted RBP8.98□□□□□ -0.97
GPC1-206ENST00000455111 ASB16-AS1Q495Z4 193 aa8.97□□□□□ -0.97
GPC1-206ENST00000455111 ETDCA0A1B0GVM5 59 aa8.96□□□□□ -0.98
GPC1-206ENST00000455111 GAGE2AQ6NT46 116 aa8.96□□□□□ -0.98
GPC1-206ENST00000455111 H0Y8G0 127 aa8.95□□□□□ -0.98
GPC1-206ENST00000455111 SOSTDC1Q6X4U4 206 aa8.95□□□□□ -0.98
GPC1-206ENST00000455111 Q8N377 158 aa8.95□□□□□ -0.98
GPC1-206ENST00000455111 KRTAP9-6A0A140TA67 174 aa8.94□□□□□ -0.98
GPC1-206ENST00000455111 MYMXA0A1B0GTQ4 84 aa8.94□□□□□ -0.98
GPC1-206ENST00000455111 LEPROTO15243 131 aa8.94□□□□□ -0.98
GPC1-206ENST00000455111 HSBP1O75506 76 aa8.94□□□□□ -0.98
GPC1-206ENST00000455111 MOBPQ13875 183 aa8.94□□□□□ -0.98
GPC1-206ENST00000455111 IGLV9-49A0A0B4J1Y8 123 aa8.93□□□□□ -0.98
GPC1-206ENST00000455111 ATP6V1G1O75348 118 aa8.93□□□□□ -0.98
GPC1-206ENST00000455111 SPINK1P00995 79 aa8.93□□□□□ -0.98
GPC1-206ENST00000455111 TRGC2P03986 189 aa8.93□□□□□ -0.98
GPC1-206ENST00000455111 PMCHL2Q9BQD1 86 aa8.93□□□□□ -0.98
GPC1-206ENST00000455111 SERF1AO75920 110 aa8.92□□□□□ -0.98
GPC1-206ENST00000455111 DDTP30046 118 aa8.92□□□□□ -0.98
GPC1-206ENST00000455111 C4orf48Q5BLP8 95 aa8.92□□□□□ -0.98
GPC1-206ENST00000455111 TRBV10-2A0A0K0K1G8 114 aa8.91□□□□□ -0.98
GPC1-206ENST00000455111 IGLV6-57P01721 117 aa8.91□□□□□ -0.98
GPC1-206ENST00000455111 Q6ZRX8 168 aa8.91□□□□□ -0.98
GPC1-206ENST00000455111 J3QQQ9 107 aa8.9□□□□□ -0.98
GPC1-206ENST00000455111 LEPROTL1O95214 131 aa8.9□□□□□ -0.98
GPC1-206ENST00000455111 ADAMTSL4-AS1Q5T5F5 129 aa8.9□□□□□ -0.98
GPC1-206ENST00000455111 ST20-AS1Q8NBB2 130 aa8.89□□□□□ -0.99
GPC1-206ENST00000455111 LINC00587B1AMM8 73 aa8.88□□□□□ -0.99
GPC1-206ENST00000455111 RPS29P62273 56 aaKnown RBP8.88□□□□□ -0.99
GPC1-206ENST00000455111 LCE2CQ5TA81 110 aa8.88□□□□□ -0.99
GPC1-206ENST00000455111 SSBP3-AS1Q7Z2R9 100 aa8.88□□□□□ -0.99
GPC1-206ENST00000455111 MAP1LC3CQ9BXW4 147 aa8.88□□□□□ -0.99
GPC1-206ENST00000455111 NPC2P61916 151 aa8.87□□□□□ -0.99
GPC1-206ENST00000455111 KRTAP19-2Q3LHN2 52 aa8.87□□□□□ -0.99
GPC1-206ENST00000455111 SPANXB1Q9NS25 103 aaPredicted RBP8.87□□□□□ -0.99
GPC1-206ENST00000455111 NDUFC2O95298 119 aa8.86□□□□□ -0.99
GPC1-206ENST00000455111 FABP4P15090 132 aa8.86□□□□□ -0.99
GPC1-206ENST00000455111 XP32Q5T750 250 aa8.86□□□□□ -0.99
GPC1-206ENST00000455111 A0A0J9YXY3 114 aa8.85□□□□□ -0.99
GPC1-206ENST00000455111 DPM2O94777 84 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms