RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 A0A096LNI7 61 aa10.64□□□□□ -0.71
LINC00963-208ENST00000454968 PLA2G2DQ9UNK4 145 aa10.64□□□□□ -0.71
LINC00963-208ENST00000454968 LRP1BQ9NZR2 4599 aa10.63□□□□□ -0.71
LINC00963-208ENST00000454968 DYNC1H1Q14204 4646 aaKnown RBP10.63□□□□□ -0.71
LINC00963-208ENST00000454968 FUSP35637 526 aaKnown RBP eCLIP10.63□□□□□ -0.714e-7■□□□□ 10.2
LINC00963-208ENST00000454968 RPL18AQ02543 176 aaKnown RBP10.63□□□□□ -0.71
LINC00963-208ENST00000454968 EPM2AB3EWF7 344 aa10.62□□□□□ -0.71
LINC00963-208ENST00000454968 NDUFC2O95298 119 aa10.62□□□□□ -0.71
LINC00963-208ENST00000454968 LINC01620Q4KN68 170 aa10.62□□□□□ -0.71
LINC00963-208ENST00000454968 Q8NDZ9 215 aa10.62□□□□□ -0.71
LINC00963-208ENST00000454968 XAGE1AQ9HD64 81 aa10.62□□□□□ -0.71
LINC00963-208ENST00000454968 FXYD2P54710 66 aa10.61□□□□□ -0.71
LINC00963-208ENST00000454968 GAGE2EQ4V326 116 aa10.61□□□□□ -0.71
LINC00963-208ENST00000454968 BVES-AS1Q5T3Y7 98 aa10.61□□□□□ -0.71
LINC00963-208ENST00000454968 GAGE2DQ9UEU5 116 aa10.61□□□□□ -0.71
LINC00963-208ENST00000454968 RPL24P83731 157 aaKnown RBP10.6□□□□□ -0.71
LINC00963-208ENST00000454968 LINC00474Q9P2X8 69 aa10.6□□□□□ -0.71
LINC00963-208ENST00000454968 A4D1N5 150 aa10.59□□□□□ -0.71
LINC00963-208ENST00000454968 NPC2P61916 151 aa10.59□□□□□ -0.71
LINC00963-208ENST00000454968 GAGE2BQ13066 116 aa10.59□□□□□ -0.71
LINC00963-208ENST00000454968 KRTAP7-1Q8IUC3 87 aa10.59□□□□□ -0.71
LINC00963-208ENST00000454968 IGLV5-37A0A075B6J1 123 aa10.58□□□□□ -0.72
LINC00963-208ENST00000454968 M0R143 59 aa10.58□□□□□ -0.72
LINC00963-208ENST00000454968 VPREB1P12018 145 aa10.58□□□□□ -0.72
LINC00963-208ENST00000454968 Q6ZSA8 131 aa10.58□□□□□ -0.72
LINC00963-208ENST00000454968 SPACA4Q8TDM5 124 aa10.58□□□□□ -0.72
LINC00963-208ENST00000454968 A0A1B0GWB2 263 aa10.58□□□□□ -0.72
LINC00963-208ENST00000454968 PCP4L1A6NKN8 68 aa10.58□□□□□ -0.72
LINC00963-208ENST00000454968 PANO1I0J062 215 aa10.58□□□□□ -0.72
LINC00963-208ENST00000454968 CHTF8P0CG12 524 aa10.58□□□□□ -0.72
LINC00963-208ENST00000454968 IGKV2-28A0A075B6P5 120 aa10.57□□□□□ -0.72
LINC00963-208ENST00000454968 IGKV2D-28P01615 120 aa10.57□□□□□ -0.72
LINC00963-208ENST00000454968 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.57□□□□□ -0.72
LINC00963-208ENST00000454968 TRBV10-2A0A0K0K1G8 114 aa10.56□□□□□ -0.72
LINC00963-208ENST00000454968 TMEM238LA0A1B0GVL6 79 aa10.56□□□□□ -0.72
LINC00963-208ENST00000454968 A6NJY4 79 aa10.56□□□□□ -0.72
LINC00963-208ENST00000454968 HINT1P49773 126 aaPredicted RBP10.56□□□□□ -0.72
LINC00963-208ENST00000454968 SERTAD4-AS1Q5TG53 156 aa10.56□□□□□ -0.72
LINC00963-208ENST00000454968 IGKV2-24A0A0C4DH68 120 aa10.55□□□□□ -0.72
LINC00963-208ENST00000454968 KRTAP10-1P60331 282 aa10.55□□□□□ -0.72
LINC00963-208ENST00000454968 A0A0B4J2C4 111 aa10.54□□□□□ -0.72
LINC00963-208ENST00000454968 A0A1W2PNN7 141 aa10.54□□□□□ -0.72
LINC00963-208ENST00000454968 FAM168BA1KXE4 195 aa10.54□□□□□ -0.72
LINC00963-208ENST00000454968 CFC1BP0CG36 223 aa10.54□□□□□ -0.72
LINC00963-208ENST00000454968 CFC1P0CG37 223 aa10.54□□□□□ -0.72
LINC00963-208ENST00000454968 SNHG12Q9BXW3 62 aa10.53□□□□□ -0.72
LINC00963-208ENST00000454968 PRR3P79522 188 aaKnown RBP10.51□□□□□ -0.73
LINC00963-208ENST00000454968 LINC00337Q8N6G1 96 aa10.51□□□□□ -0.73
LINC00963-208ENST00000454968 PLAC8Q9NZF1 115 aa10.51□□□□□ -0.73
LINC00963-208ENST00000454968 APOBP04114 4563 aaKnown RBP10.51□□□□□ -0.73
LINC00963-208ENST00000454968 FAM30AQ9NZY2 134 aa10.5□□□□□ -0.73
LINC00963-208ENST00000454968 A0A087WYN8 130 aa10.5□□□□□ -0.73
LINC00963-208ENST00000454968 M0R378 163 aa10.5□□□□□ -0.73
LINC00963-208ENST00000454968 NHP2Q9NX24 153 aaKnown RBP10.5□□□□□ -0.73
LINC00963-208ENST00000454968 IGLV6-57P01721 117 aa10.49□□□□□ -0.73
LINC00963-208ENST00000454968 C22orf24Q9Y442 160 aa10.49□□□□□ -0.73
LINC00963-208ENST00000454968 TRAV13-2A0A0B4J235 113 aa10.48□□□□□ -0.73
LINC00963-208ENST00000454968 A6NDN8 102 aa10.48□□□□□ -0.73
LINC00963-208ENST00000454968 FAM19A5Q7Z5A7 132 aaPredicted RBP10.47□□□□□ -0.73
LINC00963-208ENST00000454968 C7orf33Q8WU49 177 aa10.47□□□□□ -0.73
LINC00963-208ENST00000454968 NCR3O14931 201 aa10.46□□□□□ -0.74
LINC00963-208ENST00000454968 MRPL55Q7Z7F7 128 aaKnown RBP10.46□□□□□ -0.74
LINC00963-208ENST00000454968 PRO1854Q9UHT4 67 aa10.46□□□□□ -0.74
LINC00963-208ENST00000454968 K7ERJ3 54 aa10.45□□□□□ -0.74
LINC00963-208ENST00000454968 M0QXV9 152 aa10.45□□□□□ -0.74
LINC00963-208ENST00000454968 NKAPP1Q8N9T2 125 aa10.45□□□□□ -0.74
LINC00963-208ENST00000454968 TMEM126AQ9H061 195 aa10.45□□□□□ -0.74
LINC00963-208ENST00000454968 IGLV1-50A0A075B6I6 118 aa10.43□□□□□ -0.74
LINC00963-208ENST00000454968 TRBV10-3A0A0K0K1G6 114 aa10.43□□□□□ -0.74
LINC00963-208ENST00000454968 BATFQ16520 125 aa10.43□□□□□ -0.74
LINC00963-208ENST00000454968 CIRBP-AS1Q8TBR5 109 aa10.43□□□□□ -0.74
LINC00963-208ENST00000454968 RAB37Q96AX2 223 aa10.43□□□□□ -0.74
LINC00963-208ENST00000454968 LINC00167Q96N53 147 aa10.43□□□□□ -0.74
LINC00963-208ENST00000454968 EPPK1P58107 5090 aaKnown RBP10.43□□□□□ -0.74
LINC00963-208ENST00000454968 LBHQ53QV2 105 aaPredicted RBP10.42□□□□□ -0.74
LINC00963-208ENST00000454968 SCXQ7RTU7 201 aa10.42□□□□□ -0.74
LINC00963-208ENST00000454968 KCNQ1DNQ9H478 68 aa10.41□□□□□ -0.74
LINC00963-208ENST00000454968 RPL13AP40429 203 aaKnown RBP10.41□□□□□ -0.74
LINC00963-208ENST00000454968 PHF5AQ7RTV0 110 aaKnown RBP10.41□□□□□ -0.74
LINC00963-208ENST00000454968 COL5A1-AS1Q5SY13 56 aa10.4□□□□□ -0.75
LINC00963-208ENST00000454968 S100A7L2Q5SY68 101 aa10.4□□□□□ -0.75
LINC00963-208ENST00000454968 DPH3Q96FX2 82 aa10.4□□□□□ -0.75
LINC00963-208ENST00000454968 TAX1BP3O14907 124 aa10.39□□□□□ -0.75
LINC00963-208ENST00000454968 TSPAN13O95857 204 aa10.39□□□□□ -0.75
LINC00963-208ENST00000454968 SPRR1AP35321 89 aa10.39□□□□□ -0.75
LINC00963-208ENST00000454968 RPL28P46779 137 aaKnown RBP10.39□□□□□ -0.75
LINC00963-208ENST00000454968 GAGE10A6NGK3 116 aa10.38□□□□□ -0.75
LINC00963-208ENST00000454968 XGP55808 180 aa10.38□□□□□ -0.75
LINC00963-208ENST00000454968 KRTAP11-1Q8IUC1 163 aa10.38□□□□□ -0.75
LINC00963-208ENST00000454968 OR13C6PQ8NH95 151 aa10.38□□□□□ -0.75
LINC00963-208ENST00000454968 SMIM11BQ8TCY0 68 aa10.38□□□□□ -0.75
LINC00963-208ENST00000454968 CBY1Q9Y3M2 126 aa10.38□□□□□ -0.75
LINC00963-208ENST00000454968 TRAV23DV6A0A075B6W5 121 aa10.36□□□□□ -0.75
LINC00963-208ENST00000454968 KRTAP4-16G5E9R7 235 aaPredicted RBP10.36□□□□□ -0.75
LINC00963-208ENST00000454968 PRYO14603 147 aa10.36□□□□□ -0.75
LINC00963-208ENST00000454968 RPL37AP8A6NKH3 93 aa10.35□□□□□ -0.75
LINC00963-208ENST00000454968 VPS13BQ7Z7G8 4022 aa10.35□□□□□ -0.75
LINC00963-208ENST00000454968 C9orf118A6NHY6 69 aa10.33□□□□□ -0.76
LINC00963-208ENST00000454968 HSPG2P98160 4391 aa10.33□□□□□ -0.76
LINC00963-208ENST00000454968 TRBV7-6A0A0J9YX20 115 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms