RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 MUC2Q02817 5179 aa8.26□□□□□ -1.09
RFTN1-207ENST00000453536 M0R378 163 aa8.26□□□□□ -1.09
RFTN1-207ENST00000453536 TRGC2P03986 189 aa8.26□□□□□ -1.09
RFTN1-207ENST00000453536 UBE2AP49459 152 aa8.26□□□□□ -1.09
RFTN1-207ENST00000453536 TSPEAR-AS2P59090 65 aa8.26□□□□□ -1.09
RFTN1-207ENST00000453536 PRR4Q16378 134 aa8.26□□□□□ -1.09
RFTN1-207ENST00000453536 SMIM13P0DJ93 91 aa8.25□□□□□ -1.09
RFTN1-207ENST00000453536 TMEM126AQ9H061 195 aa8.25□□□□□ -1.09
RFTN1-207ENST00000453536 LINC00158P58513 81 aa8.24□□□□□ -1.09
RFTN1-207ENST00000453536 FAM19A1Q7Z5A9 133 aa8.24□□□□□ -1.09
RFTN1-207ENST00000453536 RETNLBQ9BQ08 111 aa8.24□□□□□ -1.09
RFTN1-207ENST00000453536 PMCHL2Q9BQD1 86 aa8.24□□□□□ -1.09
RFTN1-207ENST00000453536 SERF1AO75920 110 aa8.23□□□□□ -1.09
RFTN1-207ENST00000453536 RPL13AP40429 203 aaKnown RBP8.23□□□□□ -1.09
RFTN1-207ENST00000453536 CHCHD1Q96BP2 118 aaKnown RBP8.23□□□□□ -1.09
RFTN1-207ENST00000453536 TRAV12-1A0A0B4J245 112 aa8.22□□□□□ -1.09
RFTN1-207ENST00000453536 NCR3O14931 201 aa8.22□□□□□ -1.09
RFTN1-207ENST00000453536 TYMSOSQ8TAI1 123 aa8.22□□□□□ -1.09
RFTN1-207ENST00000453536 HSBP1O75506 76 aa8.21□□□□□ -1.1
RFTN1-207ENST00000453536 C3orf22Q8N5N4 141 aa8.21□□□□□ -1.1
RFTN1-207ENST00000453536 DAND5Q8N907 189 aa8.21□□□□□ -1.1
RFTN1-207ENST00000453536 CRYGAP11844 174 aa8.2□□□□□ -1.1
RFTN1-207ENST00000453536 FABP4P15090 132 aa8.19□□□□□ -1.1
RFTN1-207ENST00000453536 COX17Q14061 63 aa8.19□□□□□ -1.1
RFTN1-207ENST00000453536 MIR7-3HGQ8N6C7 128 aa8.19□□□□□ -1.1
RFTN1-207ENST00000453536 MEIG1Q5JSS6 88 aa8.18□□□□□ -1.1
RFTN1-207ENST00000453536 HIGD2AQ9BW72 106 aa8.18□□□□□ -1.1
RFTN1-207ENST00000453536 MUC17Q685J3 4493 aa8.18□□□□□ -1.1
RFTN1-207ENST00000453536 COLCA2A8K830 154 aa8.17□□□□□ -1.1
RFTN1-207ENST00000453536 RPL24P83731 157 aaKnown RBP8.17□□□□□ -1.1
RFTN1-207ENST00000453536 BOD1L2Q8IYS8 172 aa8.17□□□□□ -1.1
RFTN1-207ENST00000453536 PLEKHB2Q96CS7 222 aa8.17□□□□□ -1.1
RFTN1-207ENST00000453536 EIF4EBP3O60516 100 aaPredicted RBP8.16□□□□□ -1.1
RFTN1-207ENST00000453536 NDUFA12Q9UI09 145 aa8.16□□□□□ -1.1
RFTN1-207ENST00000453536 LEPROTL1O95214 131 aa8.14□□□□□ -1.11
RFTN1-207ENST00000453536 TRBV10-3A0A0K0K1G6 114 aa8.13□□□□□ -1.11
RFTN1-207ENST00000453536 NPC2P61916 151 aa8.13□□□□□ -1.11
RFTN1-207ENST00000453536 LINC00304Q8N9R0 145 aa8.13□□□□□ -1.11
RFTN1-207ENST00000453536 PPDPFQ9H3Y8 114 aa8.13□□□□□ -1.11
RFTN1-207ENST00000453536 FAM229BQ4G0N7 80 aa8.12□□□□□ -1.11
RFTN1-207ENST00000453536 KRTAP4-16G5E9R7 235 aaPredicted RBP8.11□□□□□ -1.11
RFTN1-207ENST00000453536 LEPROTO15243 131 aa8.11□□□□□ -1.11
RFTN1-207ENST00000453536 ERC2-IT1O76042 136 aa8.11□□□□□ -1.11
RFTN1-207ENST00000453536 SOSTDC1Q6X4U4 206 aa8.11□□□□□ -1.11
RFTN1-207ENST00000453536 SPRR4Q96PI1 79 aa8.11□□□□□ -1.11
RFTN1-207ENST00000453536 IGKV2D-26A0A0A0MRZ7 120 aa8.1□□□□□ -1.11
RFTN1-207ENST00000453536 ATP6V1G1O75348 118 aa8.1□□□□□ -1.11
RFTN1-207ENST00000453536 SFTA2Q6UW10 78 aa8.1□□□□□ -1.11
RFTN1-207ENST00000453536 SMCR5Q8TEV8 140 aa8.1□□□□□ -1.11
RFTN1-207ENST00000453536 MYMXA0A1B0GTQ4 84 aa8.09□□□□□ -1.11
RFTN1-207ENST00000453536 J3QQQ9 107 aa8.09□□□□□ -1.11
RFTN1-207ENST00000453536 SPRR1AP35321 89 aa8.09□□□□□ -1.11
RFTN1-207ENST00000453536 PRYO14603 147 aa8.08□□□□□ -1.12
RFTN1-207ENST00000453536 DPM2O94777 84 aa8.08□□□□□ -1.12
RFTN1-207ENST00000453536 HERV-K104P63124 156 aa8.08□□□□□ -1.12
RFTN1-207ENST00000453536 ADAMTSL4-AS1Q5T5F5 129 aa8.08□□□□□ -1.12
RFTN1-207ENST00000453536 IGKCP01834 107 aa8.07□□□□□ -1.12
RFTN1-207ENST00000453536 KCNQ1DNQ9H478 68 aa8.07□□□□□ -1.12
RFTN1-207ENST00000453536 FAT4Q6V0I7 4981 aa8.06□□□□□ -1.12
RFTN1-207ENST00000453536 HIST1H2BKO60814 126 aa8.06□□□□□ -1.12
RFTN1-207ENST00000453536 HIST1H2BJP06899 126 aa8.06□□□□□ -1.12
RFTN1-207ENST00000453536 HIST1H2BOP23527 126 aa8.06□□□□□ -1.12
RFTN1-207ENST00000453536 HIST1H2BBP33778 126 aa8.06□□□□□ -1.12
RFTN1-207ENST00000453536 HIST1H2BDP58876 126 aa8.06□□□□□ -1.12
RFTN1-207ENST00000453536 HIST1H2BCP62807 126 aa8.06□□□□□ -1.12
RFTN1-207ENST00000453536 HIST2H2BEQ16778 126 aa8.06□□□□□ -1.12
RFTN1-207ENST00000453536 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.06□□□□□ -1.12
RFTN1-207ENST00000453536 HIST1H2BHQ93079 126 aa8.06□□□□□ -1.12
RFTN1-207ENST00000453536 HIST1H2BNQ99877 126 aa8.06□□□□□ -1.12
RFTN1-207ENST00000453536 HIST1H2BMQ99879 126 aa8.06□□□□□ -1.12
RFTN1-207ENST00000453536 Q9BRP9 147 aa8.06□□□□□ -1.12
RFTN1-207ENST00000453536 TTTY13Q9BZ97 58 aa8.06□□□□□ -1.12
RFTN1-207ENST00000453536 PLNP26678 52 aa8.05□□□□□ -1.12
RFTN1-207ENST00000453536 HSPB8Q9UJY1 196 aa8.05□□□□□ -1.12
RFTN1-207ENST00000453536 A0A0J9YXY3 114 aa8.04□□□□□ -1.12
RFTN1-207ENST00000453536 ETDCA0A1B0GVM5 59 aa8.04□□□□□ -1.12
RFTN1-207ENST00000453536 B5MCH6 92 aa8.04□□□□□ -1.12
RFTN1-207ENST00000453536 LGALS3P17931 250 aaKnown RBP8.04□□□□□ -1.12
RFTN1-207ENST00000453536 LINC00337Q8N6G1 96 aa8.04□□□□□ -1.12
RFTN1-207ENST00000453536 DDTP30046 118 aa8.03□□□□□ -1.12
RFTN1-207ENST00000453536 Q8NBF4 154 aa8.03□□□□□ -1.12
RFTN1-207ENST00000453536 LOC107984156A0A0G2JMH3 177 aa8.02□□□□□ -1.13
RFTN1-207ENST00000453536 GAGE2AQ6NT46 116 aa8.02□□□□□ -1.13
RFTN1-207ENST00000453536 ARL17AQ8IVW1 177 aa8.02□□□□□ -1.13
RFTN1-207ENST00000453536 IGLV7-46A0A075B6I9 117 aa8.01□□□□□ -1.13
RFTN1-207ENST00000453536 SYS1-DBNDD2H3BUS1 97 aa8.01□□□□□ -1.13
RFTN1-207ENST00000453536 HERVK_113P61574 105 aa8.01□□□□□ -1.13
RFTN1-207ENST00000453536 LITAFQ99732 161 aa8.01□□□□□ -1.13
RFTN1-207ENST00000453536 MAP1LC3CQ9BXW4 147 aa8.01□□□□□ -1.13
RFTN1-207ENST00000453536 IGLV9-49A0A0B4J1Y8 123 aa8□□□□□ -1.13
RFTN1-207ENST00000453536 E9PLD3 99 aa8□□□□□ -1.13
RFTN1-207ENST00000453536 ST20-AS1Q8NBB2 130 aa8□□□□□ -1.13
RFTN1-207ENST00000453536 IGLV6-57P01721 117 aa7.99□□□□□ -1.13
RFTN1-207ENST00000453536 MOBPQ13875 183 aa7.99□□□□□ -1.13
RFTN1-207ENST00000453536 NMUP48645 174 aa7.98□□□□□ -1.13
RFTN1-207ENST00000453536 LINC00483Q53H64 154 aa7.98□□□□□ -1.13
RFTN1-207ENST00000453536 SPANXB1Q9NS25 103 aaPredicted RBP7.98□□□□□ -1.13
RFTN1-207ENST00000453536 TRBV10-2A0A0K0K1G8 114 aa7.97□□□□□ -1.13
RFTN1-207ENST00000453536 LINC01545Q5VT33 79 aa7.97□□□□□ -1.13
RFTN1-207ENST00000453536 Q6ZRX8 168 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms