RNA–Protein interactions for RNA: ENST00000453466.1

PMPCB-205, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,509 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-205ENST00000453466 A0A0U1RRA0 63 aa12.89□□□□□ -0.35
PMPCB-205ENST00000453466 TMEM238LA0A1B0GVL6 79 aa12.89□□□□□ -0.35
PMPCB-205ENST00000453466 A6NJY4 79 aa12.89□□□□□ -0.35
PMPCB-205ENST00000453466 PFN2P35080 140 aa12.89□□□□□ -0.35
PMPCB-205ENST00000453466 RPL24P83731 157 aaKnown RBP12.89□□□□□ -0.35
PMPCB-205ENST00000453466 BATFQ16520 125 aa12.89□□□□□ -0.35
PMPCB-205ENST00000453466 RNF151Q2KHN1 245 aa12.89□□□□□ -0.35
PMPCB-205ENST00000453466 Q6ZSA8 131 aa12.89□□□□□ -0.35
PMPCB-205ENST00000453466 MIR7-3HGQ8N6C7 128 aa12.89□□□□□ -0.35
PMPCB-205ENST00000453466 LINC00308Q8TCZ7 52 aa12.89□□□□□ -0.35
PMPCB-205ENST00000453466 Q6ZRU5 148 aa12.88□□□□□ -0.35
PMPCB-205ENST00000453466 DAND5Q8N907 189 aa12.88□□□□□ -0.35
PMPCB-205ENST00000453466 C9orf116Q5BN46 136 aaPredicted RBP12.88□□□□□ -0.35
PMPCB-205ENST00000453466 HSPG2P98160 4391 aa12.87□□□□□ -0.35
PMPCB-205ENST00000453466 LOC107984156A0A0G2JMH3 177 aa12.87□□□□□ -0.35
PMPCB-205ENST00000453466 A6NDN8 102 aa12.87□□□□□ -0.35
PMPCB-205ENST00000453466 SDIM1Q6ZPB5 146 aa12.87□□□□□ -0.35
PMPCB-205ENST00000453466 ARL17AQ8IVW1 177 aa12.87□□□□□ -0.35
PMPCB-205ENST00000453466 COL5A1-AS1Q5SY13 56 aa12.86□□□□□ -0.35
PMPCB-205ENST00000453466 A0A1B0GWB2 263 aa12.85□□□□□ -0.35
PMPCB-205ENST00000453466 A4D1N5 150 aa12.84□□□□□ -0.35
PMPCB-205ENST00000453466 EIF4EBP3O60516 100 aaPredicted RBP12.84□□□□□ -0.35
PMPCB-205ENST00000453466 HAMPP81172 84 aa12.84□□□□□ -0.35
PMPCB-205ENST00000453466 SOSTDC1Q6X4U4 206 aa12.84□□□□□ -0.35
PMPCB-205ENST00000453466 Q8N1X5 172 aa12.84□□□□□ -0.35
PMPCB-205ENST00000453466 CARD19Q96LW7 228 aa12.84□□□□□ -0.35
PMPCB-205ENST00000453466 DNAH8Q96JB1 4490 aa12.83□□□□□ -0.36
PMPCB-205ENST00000453466 NDUFC2-KCTD14E9PQ53 114 aa12.82□□□□□ -0.36
PMPCB-205ENST00000453466 TLX1NBP0CAT3 122 aa12.82□□□□□ -0.36
PMPCB-205ENST00000453466 NPC2P61916 151 aa12.82□□□□□ -0.36
PMPCB-205ENST00000453466 NHP2Q9NX24 153 aaKnown RBP12.82□□□□□ -0.36
PMPCB-205ENST00000453466 SND1-IT1Q9HBX3 110 aa12.81□□□□□ -0.36
PMPCB-205ENST00000453466 PKIGQ9Y2B9 76 aa12.81□□□□□ -0.36
PMPCB-205ENST00000453466 CFC1BP0CG36 223 aa12.8□□□□□ -0.36
PMPCB-205ENST00000453466 CFC1P0CG37 223 aa12.8□□□□□ -0.36
PMPCB-205ENST00000453466 SCXQ7RTU7 201 aa12.8□□□□□ -0.36
PMPCB-205ENST00000453466 SMR3BP02814 79 aaPredicted RBP12.79□□□□□ -0.36
PMPCB-205ENST00000453466 DPH3Q96FX2 82 aa12.79□□□□□ -0.36
PMPCB-205ENST00000453466 A0A0B4J2C4 111 aa12.78□□□□□ -0.36
PMPCB-205ENST00000453466 CIRBP-AS1Q8TBR5 109 aa12.78□□□□□ -0.36
PMPCB-205ENST00000453466 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.78□□□□□ -0.36
PMPCB-205ENST00000453466 KRTAP17-1Q9BYP8 105 aa12.77□□□□□ -0.37
PMPCB-205ENST00000453466 NDUFC2O95298 119 aa12.76□□□□□ -0.37
PMPCB-205ENST00000453466 EPM2AB3EWF7 344 aa12.75□□□□□ -0.37
PMPCB-205ENST00000453466 FAM229AH3BQW9 127 aa12.75□□□□□ -0.37
PMPCB-205ENST00000453466 PANO1I0J062 215 aa12.74□□□□□ -0.37
PMPCB-205ENST00000453466 TAX1BP3O14907 124 aa12.74□□□□□ -0.37
PMPCB-205ENST00000453466 Q6ZRP5 223 aa12.74□□□□□ -0.37
PMPCB-205ENST00000453466 PRO1854Q9UHT4 67 aa12.74□□□□□ -0.37
PMPCB-205ENST00000453466 K7ERJ3 54 aa12.73□□□□□ -0.37
PMPCB-205ENST00000453466 LINC00474Q9P2X8 69 aa12.73□□□□□ -0.37
PMPCB-205ENST00000453466 LOC107984640A0A0U1RRK4 108 aa12.72□□□□□ -0.37
PMPCB-205ENST00000453466 CHTF8P0CG12 524 aa12.72□□□□□ -0.37
PMPCB-205ENST00000453466 RAB37Q96AX2 223 aa12.72□□□□□ -0.37
PMPCB-205ENST00000453466 IGKV2-24A0A0C4DH68 120 aa12.72□□□□□ -0.37
PMPCB-205ENST00000453466 SPACA4Q8TDM5 124 aa12.72□□□□□ -0.37
PMPCB-205ENST00000453466 KRTAP4-5Q9BYR2 181 aa12.72□□□□□ -0.37
PMPCB-205ENST00000453466 Q5VSD8 79 aa12.71□□□□□ -0.38
PMPCB-205ENST00000453466 A0A096LNI7 61 aa12.7□□□□□ -0.38
PMPCB-205ENST00000453466 XAGE1AQ9HD64 81 aa12.7□□□□□ -0.38
PMPCB-205ENST00000453466 IGKV2-28A0A075B6P5 120 aa12.69□□□□□ -0.38
PMPCB-205ENST00000453466 A0A087WYN8 130 aa12.69□□□□□ -0.38
PMPCB-205ENST00000453466 IGKV2D-28P01615 120 aa12.69□□□□□ -0.38
PMPCB-205ENST00000453466 GAGE2EQ4V326 116 aa12.69□□□□□ -0.38
PMPCB-205ENST00000453466 LINC00528Q8N1L1 170 aa12.69□□□□□ -0.38
PMPCB-205ENST00000453466 GAGE2DQ9UEU5 116 aa12.69□□□□□ -0.38
PMPCB-205ENST00000453466 TRAV13-2A0A0B4J235 113 aa12.68□□□□□ -0.38
PMPCB-205ENST00000453466 C9orf118A6NHY6 69 aa12.68□□□□□ -0.38
PMPCB-205ENST00000453466 RPL18AQ02543 176 aaKnown RBP12.67□□□□□ -0.38
PMPCB-205ENST00000453466 GAGE2BQ13066 116 aa12.67□□□□□ -0.38
PMPCB-205ENST00000453466 C9orf129Q5T035 196 aaKnown RBP12.67□□□□□ -0.38
PMPCB-205ENST00000453466 PLA2G2DQ9UNK4 145 aa12.67□□□□□ -0.38
PMPCB-205ENST00000453466 PLA2G1BP04054 148 aaKnown RBP12.66□□□□□ -0.38
PMPCB-205ENST00000453466 Q8NDZ9 215 aa12.66□□□□□ -0.38
PMPCB-205ENST00000453466 PLAC8Q9NZF1 115 aa12.66□□□□□ -0.38
PMPCB-205ENST00000453466 TRBV10-2A0A0K0K1G8 114 aa12.65□□□□□ -0.38
PMPCB-205ENST00000453466 LINC00337Q8N6G1 96 aa12.65□□□□□ -0.38
PMPCB-205ENST00000453466 FAT1Q14517 4588 aa12.65□□□□□ -0.38
PMPCB-205ENST00000453466 TSPAN13O95857 204 aa12.64□□□□□ -0.39
PMPCB-205ENST00000453466 VPREB1P12018 145 aa12.63□□□□□ -0.39
PMPCB-205ENST00000453466 PRR3P79522 188 aaKnown RBP12.62□□□□□ -0.39
PMPCB-205ENST00000453466 H3BUT2 72 aa12.62□□□□□ -0.39
PMPCB-205ENST00000453466 RPL13AP40429 203 aaKnown RBP12.62□□□□□ -0.39
PMPCB-205ENST00000453466 VPS13BQ7Z7G8 4022 aa12.61□□□□□ -0.39
PMPCB-205ENST00000453466 ABCA13Q86UQ4 5058 aa12.6□□□□□ -0.39
PMPCB-205ENST00000453466 TMEM126AQ9H061 195 aa12.6□□□□□ -0.39
PMPCB-205ENST00000453466 IGLV5-37A0A075B6J1 123 aa12.59□□□□□ -0.39
PMPCB-205ENST00000453466 SRRM2Q9UQ35 2752 aaKnown RBP12.59□□□□□ -0.39
PMPCB-205ENST00000453466 A0A1W2PPM0 123 aa12.58□□□□□ -0.4
PMPCB-205ENST00000453466 PCLOQ9Y6V0 5065 aa12.58□□□□□ -0.4
PMPCB-205ENST00000453466 H7C2G1 150 aa12.57□□□□□ -0.4
PMPCB-205ENST00000453466 M0R378 163 aa12.57□□□□□ -0.4
PMPCB-205ENST00000453466 C7orf33Q8WU49 177 aa12.57□□□□□ -0.4
PMPCB-205ENST00000453466 A0A1B0GV90 55 aa12.57□□□□□ -0.4
PMPCB-205ENST00000453466 NCR3O14931 201 aa12.57□□□□□ -0.4
PMPCB-205ENST00000453466 IGLV6-57P01721 117 aa12.57□□□□□ -0.4
PMPCB-205ENST00000453466 INAFM2P0DMQ5 153 aa12.57□□□□□ -0.4
PMPCB-205ENST00000453466 RPL37AP61513 92 aaKnown RBP12.57□□□□□ -0.4
PMPCB-205ENST00000453466 Q1RN00 199 aa12.57□□□□□ -0.4
PMPCB-205ENST00000453466 OR13C6PQ8NH95 151 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms