RNA–Protein interactions for RNA: ENST00000452382.1

PMS1-218, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-218ENST00000452382 SAMD9Q5K651 1589 aa0.53□□□□□ -2.33
PMS1-218ENST00000452382 CACNA1HO95180 2353 aa0.53□□□□□ -2.33
PMS1-218ENST00000452382 C2CD3Q4AC94 2353 aa0.53□□□□□ -2.33
PMS1-218ENST00000452382 TMEM131LA2VDJ0 1609 aa0.53□□□□□ -2.33
PMS1-218ENST00000452382 PAPPAQ13219 1627 aa0.53□□□□□ -2.33
PMS1-218ENST00000452382 LRRC37AA6NMS7 1700 aa0.52□□□□□ -2.33
PMS1-218ENST00000452382 MYO5CQ9NQX4 1742 aa0.52□□□□□ -2.33
PMS1-218ENST00000452382 DEFB121Q5J5C9 76 aa0.52□□□□□ -2.33
PMS1-218ENST00000452382 PLAC8Q9NZF1 115 aa0.52□□□□□ -2.33
PMS1-218ENST00000452382 NKTRP30414 1462 aaKnown RBP0.52□□□□□ -2.33
PMS1-218ENST00000452382 PIK3C2BO00750 1634 aa0.52□□□□□ -2.33
PMS1-218ENST00000452382 ALKQ9UM73 1620 aa0.52□□□□□ -2.33
PMS1-218ENST00000452382 PPRC1Q5VV67 1664 aaKnown RBP0.52□□□□□ -2.33
PMS1-218ENST00000452382 FMN2Q9NZ56 1722 aa0.52□□□□□ -2.33
PMS1-218ENST00000452382 TSC2P49815 1807 aa0.52□□□□□ -2.33
PMS1-218ENST00000452382 CACNA1EQ15878 2313 aa0.52□□□□□ -2.33
PMS1-218ENST00000452382 SMIM31A0A1B0GVY4 71 aa0.51□□□□□ -2.33
PMS1-218ENST00000452382 CPSF4LA6NMK7 179 aaKnown RBP0.51□□□□□ -2.33
PMS1-218ENST00000452382 COX6B1P14854 86 aa0.51□□□□□ -2.33
PMS1-218ENST00000452382 NHSL1Q5SYE7 1610 aa0.51□□□□□ -2.33
PMS1-218ENST00000452382 BCORQ6W2J9 1755 aa0.51□□□□□ -2.33
PMS1-218ENST00000452382 HEPN1Q6WQI6 88 aa0.51□□□□□ -2.33
PMS1-218ENST00000452382 KRTAP19-3Q7Z4W3 81 aa0.51□□□□□ -2.33
PMS1-218ENST00000452382 CFAP74Q9C0B2 1584 aa0.51□□□□□ -2.33
PMS1-218ENST00000452382 PTPN23Q9H3S7 1636 aa0.51□□□□□ -2.33
PMS1-218ENST00000452382 UGGT2Q9NYU1 1516 aa0.51□□□□□ -2.33
PMS1-218ENST00000452382 PTPRZ1P23471 2315 aaPredicted RBP0.5□□□□□ -2.33
PMS1-218ENST00000452382 TNCP24821 2201 aa0.5□□□□□ -2.33
PMS1-218ENST00000452382 RGPD1P0DJD0 1748 aa0.5□□□□□ -2.33
PMS1-218ENST00000452382 DUOX2Q9NRD8 1548 aa0.5□□□□□ -2.33
PMS1-218ENST00000452382 NCOA2Q15596 1464 aa0.5□□□□□ -2.33
PMS1-218ENST00000452382 I3L2K1 104 aa0.5□□□□□ -2.33
PMS1-218ENST00000452382 K7EQZ3 153 aa0.5□□□□□ -2.33
PMS1-218ENST00000452382 IFI6P09912 130 aa0.5□□□□□ -2.33
PMS1-218ENST00000452382 NREPQ16612 68 aa0.5□□□□□ -2.33
PMS1-218ENST00000452382 SPINK6Q6UWN8 80 aa0.5□□□□□ -2.33
PMS1-218ENST00000452382 APLNQ9ULZ1 77 aa0.5□□□□□ -2.33
PMS1-218ENST00000452382 PKDREJQ9NTG1 2253 aa0.5□□□□□ -2.33
PMS1-218ENST00000452382 ARFGEF2Q9Y6D5 1785 aa0.5□□□□□ -2.33
PMS1-218ENST00000452382 ANKRD17O75179 2603 aaKnown RBP0.5□□□□□ -2.33
PMS1-218ENST00000452382 QSER1Q2KHR3 1735 aa0.5□□□□□ -2.33
PMS1-218ENST00000452382 TTC28Q96AY4 2481 aa0.49□□□□□ -2.33
PMS1-218ENST00000452382 LAMC1P11047 1609 aa0.49□□□□□ -2.33
PMS1-218ENST00000452382 IQGAP3Q86VI3 1631 aa0.49□□□□□ -2.33
PMS1-218ENST00000452382 TULP4Q9NRJ4 1543 aa0.49□□□□□ -2.33
PMS1-218ENST00000452382 ATXN8Q156A1 80 aa0.49□□□□□ -2.33
PMS1-218ENST00000452382 DEFB123Q8N688 67 aa0.49□□□□□ -2.33
PMS1-218ENST00000452382 HILPDAQ9Y5L2 63 aa0.49□□□□□ -2.33
PMS1-218ENST00000452382 TIAM2Q8IVF5 1701 aa0.49□□□□□ -2.33
PMS1-218ENST00000452382 ABCA8O94911 1581 aa0.49□□□□□ -2.33
PMS1-218ENST00000452382 CCDC88BA6NC98 1476 aa0.48□□□□□ -2.33
PMS1-218ENST00000452382 CLIP1P30622 1438 aa0.48□□□□□ -2.33
PMS1-218ENST00000452382 SPTBN1Q01082 2364 aaKnown RBP0.48□□□□□ -2.33
PMS1-218ENST00000452382 POLR1AO95602 1720 aaPredicted RBP0.48□□□□□ -2.33
PMS1-218ENST00000452382 CCL22O00626 93 aa0.48□□□□□ -2.33
PMS1-218ENST00000452382 SPINK4O60575 86 aa0.48□□□□□ -2.33
PMS1-218ENST00000452382 SPINK1P00995 79 aa0.48□□□□□ -2.33
PMS1-218ENST00000452382 DEFB105AQ8NG35 78 aa0.48□□□□□ -2.33
PMS1-218ENST00000452382 S100ZQ8WXG8 99 aa0.48□□□□□ -2.33
PMS1-218ENST00000452382 MRPL34Q9BQ48 92 aaKnown RBP0.48□□□□□ -2.33
PMS1-218ENST00000452382 ZC3H13Q5T200 1668 aaKnown RBP0.48□□□□□ -2.33
PMS1-218ENST00000452382 CFAP43Q8NDM7 1665 aa0.48□□□□□ -2.33
PMS1-218ENST00000452382 KMT2DO14686 5537 aa0.47□□□□□ -2.33
PMS1-218ENST00000452382 BIVM-ERCC5R4GMW8 1640 aa0.47□□□□□ -2.33
PMS1-218ENST00000452382 NDUFA4O00483 81 aa0.47□□□□□ -2.33
PMS1-218ENST00000452382 HMGA1P17096 107 aaKnown RBP0.47□□□□□ -2.33
PMS1-218ENST00000452382 SPRR1BP22528 89 aa0.47□□□□□ -2.33
PMS1-218ENST00000452382 DEFB109BQ30KR1 87 aa0.47□□□□□ -2.33
PMS1-218ENST00000452382 DNMBPQ6XZF7 1577 aa0.47□□□□□ -2.33
PMS1-218ENST00000452382 SLIT1O75093 1534 aa0.47□□□□□ -2.33
PMS1-218ENST00000452382 ZNF292O60281 2723 aa0.47□□□□□ -2.33
PMS1-218ENST00000452382 RICTORQ6R327 1708 aa0.47□□□□□ -2.33
PMS1-218ENST00000452382 DOT1LQ8TEK3 1739 aa0.47□□□□□ -2.33
PMS1-218ENST00000452382 ABCA12Q86UK0 2595 aa0.47□□□□□ -2.33
PMS1-218ENST00000452382 IGF2RP11717 2491 aa0.46□□□□□ -2.34
PMS1-218ENST00000452382 CNOT1A5YKK6 2376 aaKnown RBP0.46□□□□□ -2.34
PMS1-218ENST00000452382 AKAP6Q13023 2319 aa0.46□□□□□ -2.34
PMS1-218ENST00000452382 SPRR1AP35321 89 aa0.46□□□□□ -2.34
PMS1-218ENST00000452382 Q5BKY6 102 aa0.46□□□□□ -2.34
PMS1-218ENST00000452382 UBL5Q9BZL1 73 aa0.46□□□□□ -2.34
PMS1-218ENST00000452382 CDKN2A-AS1Q9UH64 79 aa0.46□□□□□ -2.34
PMS1-218ENST00000452382 ERICH3Q5RHP9 1530 aa0.46□□□□□ -2.34
PMS1-218ENST00000452382 LMTK2Q8IWU2 1503 aa0.46□□□□□ -2.34
PMS1-218ENST00000452382 PLCH1Q4KWH8 1693 aa0.46□□□□□ -2.34
PMS1-218ENST00000452382 ZNF831Q5JPB2 1677 aa0.46□□□□□ -2.34
PMS1-218ENST00000452382 MROH1Q8NDA8 1641 aa0.46□□□□□ -2.34
PMS1-218ENST00000452382 MAGI3Q5TCQ9 1506 aa0.45□□□□□ -2.34
PMS1-218ENST00000452382 TPRP12270 2363 aaKnown RBP0.45□□□□□ -2.34
PMS1-218ENST00000452382 DDX60LQ5H9U9 1706 aaKnown RBP0.45□□□□□ -2.34
PMS1-218ENST00000452382 POLQO75417 2590 aa0.45□□□□□ -2.34
PMS1-218ENST00000452382 KLK9Q2XQG4 91 aa0.45□□□□□ -2.34
PMS1-218ENST00000452382 Q5VSD8 79 aa0.45□□□□□ -2.34
PMS1-218ENST00000452382 ENHOQ6UWT2 76 aa0.45□□□□□ -2.34
PMS1-218ENST00000452382 ANKRD50Q9ULJ7 1429 aa0.45□□□□□ -2.34
PMS1-218ENST00000452382 ADAMTS12P58397 1594 aa0.45□□□□□ -2.34
PMS1-218ENST00000452382 CEP170BQ9Y4F5 1589 aaPredicted RBP0.45□□□□□ -2.34
PMS1-218ENST00000452382 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.44□□□□□ -2.342e-9■■■■□ 19.6
PMS1-218ENST00000452382 PREX1Q8TCU6 1659 aa0.44□□□□□ -2.34
PMS1-218ENST00000452382 A0A087WWC5 75 aa0.44□□□□□ -2.34
PMS1-218ENST00000452382 LOC730098B7Z3J9 87 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms