RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 ITPR1Q14643 2758 aa2.77□□□□□ -1.97
HMGB3P22-202ENST00000451823 IGLV5-37A0A075B6J1 123 aa2.77□□□□□ -1.97
HMGB3P22-202ENST00000451823 A0A0U1RQV1 116 aa2.77□□□□□ -1.97
HMGB3P22-202ENST00000451823 B4DSR2 109 aa2.77□□□□□ -1.97
HMGB3P22-202ENST00000451823 F8WEM9 126 aa2.77□□□□□ -1.97
HMGB3P22-202ENST00000451823 UBE2L6O14933 153 aa2.77□□□□□ -1.97
HMGB3P22-202ENST00000451823 IGLV6-57P01721 117 aa2.77□□□□□ -1.97
HMGB3P22-202ENST00000451823 IGHV4-30-4P0DP06 118 aa2.77□□□□□ -1.97
HMGB3P22-202ENST00000451823 RBM3P98179 157 aaKnown RBP2.77□□□□□ -1.97
HMGB3P22-202ENST00000451823 PMAIP1Q13794 54 aa2.77□□□□□ -1.97
HMGB3P22-202ENST00000451823 CSNK1G2-AS1Q8NCQ2 148 aa2.77□□□□□ -1.97
HMGB3P22-202ENST00000451823 C4orf3Q8WVX3 66 aa2.77□□□□□ -1.97
HMGB3P22-202ENST00000451823 ADGRG4Q8IZF6 3080 aa2.77□□□□□ -1.97
HMGB3P22-202ENST00000451823 COL6A6A6NMZ7 2263 aa2.77□□□□□ -1.97
HMGB3P22-202ENST00000451823 SPTBN4Q9H254 2564 aa2.77□□□□□ -1.97
HMGB3P22-202ENST00000451823 SORL1Q92673 2214 aa2.76□□□□□ -1.97
HMGB3P22-202ENST00000451823 LCE6AA0A183 80 aa2.76□□□□□ -1.97
HMGB3P22-202ENST00000451823 MIFP14174 115 aa2.76□□□□□ -1.97
HMGB3P22-202ENST00000451823 SEC61BP60468 96 aaKnown RBP2.76□□□□□ -1.97
HMGB3P22-202ENST00000451823 PRR3P79522 188 aaKnown RBP2.76□□□□□ -1.97
HMGB3P22-202ENST00000451823 C6orf99Q4VX62 202 aa2.76□□□□□ -1.97
HMGB3P22-202ENST00000451823 C16orf74Q96GX8 76 aa2.76□□□□□ -1.97
HMGB3P22-202ENST00000451823 TM2D3Q9BRN9 247 aa2.76□□□□□ -1.97
HMGB3P22-202ENST00000451823 OCR1Q9BZK8 76 aa2.76□□□□□ -1.97
HMGB3P22-202ENST00000451823 LINC00474Q9P2X8 69 aa2.76□□□□□ -1.97
HMGB3P22-202ENST00000451823 CELA1Q9UNI1 258 aa2.76□□□□□ -1.97
HMGB3P22-202ENST00000451823 HRNRQ86YZ3 2850 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P22-202ENST00000451823 PTPRQQ9UMZ3 2332 aa2.76□□□□□ -1.97
HMGB3P22-202ENST00000451823 ACACBO00763 2458 aa2.75□□□□□ -1.97
HMGB3P22-202ENST00000451823 IGF2RP11717 2491 aa2.75□□□□□ -1.97
HMGB3P22-202ENST00000451823 A0A0J9YWU9 116 aa2.75□□□□□ -1.97
HMGB3P22-202ENST00000451823 KRTAP5-9P26371 169 aa2.75□□□□□ -1.97
HMGB3P22-202ENST00000451823 NREPQ16612 68 aa2.75□□□□□ -1.97
HMGB3P22-202ENST00000451823 DEFB136Q30KP8 78 aa2.75□□□□□ -1.97
HMGB3P22-202ENST00000451823 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P22-202ENST00000451823 ZNF843Q8N446 348 aa2.75□□□□□ -1.97
HMGB3P22-202ENST00000451823 DYNLRB2Q8TF09 96 aa2.75□□□□□ -1.97
HMGB3P22-202ENST00000451823 NOP10Q9NPE3 64 aaKnown RBP2.75□□□□□ -1.97
HMGB3P22-202ENST00000451823 LAMTOR3Q9UHA4 124 aa2.75□□□□□ -1.97
HMGB3P22-202ENST00000451823 SNURFQ9Y675 71 aa2.75□□□□□ -1.97
HMGB3P22-202ENST00000451823 SPTA1P02549 2419 aa2.75□□□□□ -1.97
HMGB3P22-202ENST00000451823 CHD8Q9HCK8 2581 aa2.75□□□□□ -1.97
HMGB3P22-202ENST00000451823 PIEZO2Q9H5I5 2752 aa2.75□□□□□ -1.97
HMGB3P22-202ENST00000451823 TLN1Q9Y490 2541 aaKnown RBP2.75□□□□□ -1.97
HMGB3P22-202ENST00000451823 CR1P17927 2039 aa2.75□□□□□ -1.97
HMGB3P22-202ENST00000451823 PRRC2CQ9Y520 2896 aaKnown RBP2.75□□□□□ -1.97
HMGB3P22-202ENST00000451823 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.74□□□□□ -1.97
HMGB3P22-202ENST00000451823 PKD1L2Q7Z442 2459 aa2.74□□□□□ -1.97
HMGB3P22-202ENST00000451823 GVQW2A0A096LPI5 108 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P22-202ENST00000451823 CCL24O00175 119 aa2.74□□□□□ -1.97
HMGB3P22-202ENST00000451823 CMC4P56277 68 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P22-202ENST00000451823 FAM229BQ4G0N7 80 aa2.74□□□□□ -1.97
HMGB3P22-202ENST00000451823 MRPL55Q7Z7F7 128 aaKnown RBP2.74□□□□□ -1.97
HMGB3P22-202ENST00000451823 SMIM29Q86T20 159 aa2.74□□□□□ -1.97
HMGB3P22-202ENST00000451823 TMEM254Q8TBM7 123 aa2.74□□□□□ -1.97
HMGB3P22-202ENST00000451823 NOTCH3Q9UM47 2321 aa2.74□□□□□ -1.97
HMGB3P22-202ENST00000451823 TRGV2A0A075B6R0 118 aa2.73□□□□□ -1.97
HMGB3P22-202ENST00000451823 TRGV4A0A0C4DH28 118 aa2.73□□□□□ -1.97
HMGB3P22-202ENST00000451823 IGKV3OR2-268A0A0C4DH90 116 aa2.73□□□□□ -1.97
HMGB3P22-202ENST00000451823 BPY2O14599 106 aa2.73□□□□□ -1.97
HMGB3P22-202ENST00000451823 IGKV4-1P06312 121 aa2.73□□□□□ -1.97
HMGB3P22-202ENST00000451823 HAMPP81172 84 aa2.73□□□□□ -1.97
HMGB3P22-202ENST00000451823 Q6ZQY7 126 aa2.73□□□□□ -1.97
HMGB3P22-202ENST00000451823 WFDC11Q8NEX6 87 aa2.73□□□□□ -1.97
HMGB3P22-202ENST00000451823 ZCCHC13Q8WW36 166 aaKnown RBP2.73□□□□□ -1.97
HMGB3P22-202ENST00000451823 CCL19Q99731 98 aa2.73□□□□□ -1.97
HMGB3P22-202ENST00000451823 C11orf68Q9H3H3 251 aaKnown RBP2.73□□□□□ -1.97
HMGB3P22-202ENST00000451823 COL12A1Q99715 3063 aa2.73□□□□□ -1.97
HMGB3P22-202ENST00000451823 SPTAN1Q13813 2472 aaKnown RBP2.73□□□□□ -1.97
HMGB3P22-202ENST00000451823 CFAP46Q8IYW2 2715 aa2.72□□□□□ -1.97
HMGB3P22-202ENST00000451823 RELNP78509 3460 aa2.72□□□□□ -1.97
HMGB3P22-202ENST00000451823 hDV103S1A0JD37 113 aa2.72□□□□□ -1.97
HMGB3P22-202ENST00000451823 COX7BP24311 80 aa2.72□□□□□ -1.97
HMGB3P22-202ENST00000451823 ELOF1P60002 83 aaKnown RBP2.72□□□□□ -1.97
HMGB3P22-202ENST00000451823 ESRGQ1W209 222 aa2.72□□□□□ -1.97
HMGB3P22-202ENST00000451823 DCHS2Q6V1P9 2916 aa2.72□□□□□ -1.97
HMGB3P22-202ENST00000451823 Q6ZRU5 148 aa2.72□□□□□ -1.97
HMGB3P22-202ENST00000451823 EPG5Q9HCE0 2579 aa2.72□□□□□ -1.97
HMGB3P22-202ENST00000451823 USP24Q9UPU5 2620 aa2.72□□□□□ -1.97
HMGB3P22-202ENST00000451823 A0A1B0GW54 56 aa2.71□□□□□ -1.98
HMGB3P22-202ENST00000451823 Q1T7F1 81 aa2.71□□□□□ -1.98
HMGB3P22-202ENST00000451823 C14orf177Q52M58 125 aa2.71□□□□□ -1.98
HMGB3P22-202ENST00000451823 C9orf116Q5BN46 136 aaPredicted RBP2.71□□□□□ -1.98
HMGB3P22-202ENST00000451823 PRR15Q8IV56 129 aa2.71□□□□□ -1.98
HMGB3P22-202ENST00000451823 LINC01006Q8NI28 216 aa2.71□□□□□ -1.98
HMGB3P22-202ENST00000451823 CHCHD10Q8WYQ3 142 aaPredicted RBP2.71□□□□□ -1.98
HMGB3P22-202ENST00000451823 HIVEP3Q5T1R4 2406 aa2.71□□□□□ -1.98
HMGB3P22-202ENST00000451823 UBR5O95071 2799 aaPredicted RBP2.7□□□□□ -1.98
HMGB3P22-202ENST00000451823 IGSF10Q6WRI0 2623 aa2.7□□□□□ -1.98
HMGB3P22-202ENST00000451823 A0A1B0GVY2 172 aa2.7□□□□□ -1.98
HMGB3P22-202ENST00000451823 IGLV1-51P01701 117 aa2.7□□□□□ -1.98
HMGB3P22-202ENST00000451823 FUSP35637 526 aaKnown RBP eCLIP2.7□□□□□ -1.98
HMGB3P22-202ENST00000451823 UNQ6190/PRO20217Q6UXQ8 127 aa2.7□□□□□ -1.98
HMGB3P22-202ENST00000451823 LINC00269Q8N2A0 174 aa2.7□□□□□ -1.98
HMGB3P22-202ENST00000451823 C11orf45Q8TAV5 145 aa2.7□□□□□ -1.98
HMGB3P22-202ENST00000451823 BRK1Q8WUW1 75 aa2.7□□□□□ -1.98
HMGB3P22-202ENST00000451823 DIRC1Q969H9 104 aa2.7□□□□□ -1.98
HMGB3P22-202ENST00000451823 CYP4F30PQ9H0H9 118 aa2.7□□□□□ -1.98
HMGB3P22-202ENST00000451823 PRR34Q9NV39 138 aa2.7□□□□□ -1.98
HMGB3P22-202ENST00000451823 KMT2BQ9UMN6 2715 aaPredicted RBP2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms