RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 DEFB121Q5J5C9 76 aa8.67□□□□□ -1.02
UBE3B-204ENST00000449510 TRBV10-3A0A0K0K1G6 114 aa8.67□□□□□ -1.02
UBE3B-204ENST00000449510 PRORYQ9H606 182 aa8.66□□□□□ -1.02
UBE3B-204ENST00000449510 UBE2BP63146 152 aa8.66□□□□□ -1.02
UBE3B-204ENST00000449510 CD164L2Q6UWJ8 174 aa8.66□□□□□ -1.02
UBE3B-204ENST00000449510 TRAV10A0A0B4J240 114 aa8.65□□□□□ -1.02
UBE3B-204ENST00000449510 Q6ZVQ6 151 aa8.65□□□□□ -1.02
UBE3B-204ENST00000449510 NBEAL1Q6ZS30 2694 aa8.65□□□□□ -1.02
UBE3B-204ENST00000449510 NOTCH1P46531 2555 aa8.65□□□□□ -1.02
UBE3B-204ENST00000449510 A0A096LNI7 61 aa8.65□□□□□ -1.03
UBE3B-204ENST00000449510 LINC01547P58512 204 aaPredicted RBP8.65□□□□□ -1.03
UBE3B-204ENST00000449510 ATP5EP2Q5VTU8 51 aa8.65□□□□□ -1.03
UBE3B-204ENST00000449510 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.65□□□□□ -1.03
UBE3B-204ENST00000449510 FUSP35637 526 aaKnown RBP eCLIP8.64□□□□□ -1.03
UBE3B-204ENST00000449510 Q8IZM0 81 aa8.64□□□□□ -1.03
UBE3B-204ENST00000449510 FAM30AQ9NZY2 134 aa8.64□□□□□ -1.03
UBE3B-204ENST00000449510 CR1P17927 2039 aa8.64□□□□□ -1.03
UBE3B-204ENST00000449510 TEP1Q99973 2627 aaKnown RBP8.64□□□□□ -1.03
UBE3B-204ENST00000449510 C10orf25Q5T742 122 aa8.63□□□□□ -1.03
UBE3B-204ENST00000449510 MIFP14174 115 aa8.63□□□□□ -1.03
UBE3B-204ENST00000449510 TRAV7A0A075B6U4 112 aa8.62□□□□□ -1.03
UBE3B-204ENST00000449510 MAST4O15021 2626 aa8.62□□□□□ -1.03
UBE3B-204ENST00000449510 RPL37AP8A6NKH3 93 aa8.62□□□□□ -1.03
UBE3B-204ENST00000449510 SPART-AS1P0CW21 52 aa8.62□□□□□ -1.03
UBE3B-204ENST00000449510 ETDCA0A1B0GVM5 59 aa8.61□□□□□ -1.03
UBE3B-204ENST00000449510 NDUFC2-KCTD14E9PQ53 114 aa8.61□□□□□ -1.03
UBE3B-204ENST00000449510 ZNF73O43830 326 aaPredicted RBP8.61□□□□□ -1.03
UBE3B-204ENST00000449510 KLK9Q2XQG4 91 aa8.6□□□□□ -1.03
UBE3B-204ENST00000449510 TM2D3Q9BRN9 247 aa8.6□□□□□ -1.03
UBE3B-204ENST00000449510 LINC00575Q6W349 94 aa8.59□□□□□ -1.03
UBE3B-204ENST00000449510 APCP25054 2843 aa8.59□□□□□ -1.03
UBE3B-204ENST00000449510 APOC4P55056 127 aa8.59□□□□□ -1.04
UBE3B-204ENST00000449510 C2orf48Q96LS8 159 aa8.59□□□□□ -1.04
UBE3B-204ENST00000449510 SMIM26A0A096LP01 95 aa8.58□□□□□ -1.04
UBE3B-204ENST00000449510 DEFB116Q30KQ4 102 aa8.58□□□□□ -1.04
UBE3B-204ENST00000449510 LINC00474Q9P2X8 69 aa8.58□□□□□ -1.04
UBE3B-204ENST00000449510 A0A0J9YWU9 116 aa8.58□□□□□ -1.04
UBE3B-204ENST00000449510 M0R2N4 97 aa8.58□□□□□ -1.04
UBE3B-204ENST00000449510 SETXQ7Z333 2677 aaKnown RBP8.58□□□□□ -1.04
UBE3B-204ENST00000449510 COL6A5A8TX70 2615 aa8.58□□□□□ -1.04
UBE3B-204ENST00000449510 BAHCC1Q9P281 2608 aa8.58□□□□□ -1.04
UBE3B-204ENST00000449510 SERP1Q9Y6X1 66 aa8.58□□□□□ -1.04
UBE3B-204ENST00000449510 PDE6GP18545 87 aa8.57□□□□□ -1.04
UBE3B-204ENST00000449510 FAM19A3Q7Z5A8 133 aa8.57□□□□□ -1.04
UBE3B-204ENST00000449510 SMR3AQ99954 134 aa8.57□□□□□ -1.04
UBE3B-204ENST00000449510 MUC7Q8TAX7 377 aa8.57□□□□□ -1.04
UBE3B-204ENST00000449510 WFDC13Q8IUB5 93 aa8.57□□□□□ -1.04
UBE3B-204ENST00000449510 SPTSSBQ8NFR3 76 aa8.57□□□□□ -1.04
UBE3B-204ENST00000449510 TRBV7-6A0A0J9YX20 115 aa8.56□□□□□ -1.04
UBE3B-204ENST00000449510 PSPHP1O15172 72 aa8.56□□□□□ -1.04
UBE3B-204ENST00000449510 IGSF10Q6WRI0 2623 aa8.56□□□□□ -1.04
UBE3B-204ENST00000449510 WFDC10BQ8IUB3 73 aa8.56□□□□□ -1.04
UBE3B-204ENST00000449510 IGKV2-24A0A0C4DH68 120 aa8.56□□□□□ -1.04
UBE3B-204ENST00000449510 RPS28P62857 69 aaKnown RBP8.56□□□□□ -1.04
UBE3B-204ENST00000449510 TMEM254Q8TBM7 123 aa8.55□□□□□ -1.04
UBE3B-204ENST00000449510 SPATA3Q8NHX4 192 aa8.55□□□□□ -1.04
UBE3B-204ENST00000449510 NIPBLQ6KC79 2804 aaeCLIP8.55□□□□□ -1.04
UBE3B-204ENST00000449510 MXRA5Q9NR99 2828 aa8.55□□□□□ -1.04
UBE3B-204ENST00000449510 LINC00336Q6ZUF6 198 aa8.54□□□□□ -1.04
UBE3B-204ENST00000449510 HIGD2AQ9BW72 106 aa8.54□□□□□ -1.04
UBE3B-204ENST00000449510 HIVEP1P15822 2718 aa8.52□□□□□ -1.04
UBE3B-204ENST00000449510 PSCAO43653 123 aa8.52□□□□□ -1.05
UBE3B-204ENST00000449510 C1orf195Q5TG92 126 aa8.52□□□□□ -1.05
UBE3B-204ENST00000449510 IGLV1-51P01701 117 aa8.51□□□□□ -1.05
UBE3B-204ENST00000449510 Q6ZQT0 140 aa8.51□□□□□ -1.05
UBE3B-204ENST00000449510 HELZ2Q9BYK8 2649 aaKnown RBP8.51□□□□□ -1.05
UBE3B-204ENST00000449510 COX17Q14061 63 aa8.5□□□□□ -1.05
UBE3B-204ENST00000449510 V9GYY9 64 aa8.49□□□□□ -1.05
UBE3B-204ENST00000449510 C22orf24Q9Y442 160 aa8.49□□□□□ -1.05
UBE3B-204ENST00000449510 NDUFS5O43920 106 aa8.48□□□□□ -1.05
UBE3B-204ENST00000449510 RETNQ9HD89 108 aa8.48□□□□□ -1.05
UBE3B-204ENST00000449510 A0A1B0GUV1 79 aa8.47□□□□□ -1.05
UBE3B-204ENST00000449510 LYRM9A8MSI8 78 aa8.47□□□□□ -1.05
UBE3B-204ENST00000449510 PRYO14603 147 aa8.47□□□□□ -1.05
UBE3B-204ENST00000449510 MP68P56378 58 aa8.47□□□□□ -1.05
UBE3B-204ENST00000449510 C9orf66Q5T8R8 295 aa8.47□□□□□ -1.05
UBE3B-204ENST00000449510 PRO0628Q9UI54 55 aa8.47□□□□□ -1.05
UBE3B-204ENST00000449510 SYCNQ0VAF6 134 aa8.46□□□□□ -1.05
UBE3B-204ENST00000449510 NDUFC1O43677 76 aa8.46□□□□□ -1.06
UBE3B-204ENST00000449510 M0R378 163 aa8.46□□□□□ -1.06
UBE3B-204ENST00000449510 OXTP01178 125 aa8.46□□□□□ -1.06
UBE3B-204ENST00000449510 GIG44P09565 113 aaPredicted RBP8.46□□□□□ -1.06
UBE3B-204ENST00000449510 KPRPQ5T749 579 aaPredicted RBP8.46□□□□□ -1.06
UBE3B-204ENST00000449510 Q6ZRU5 148 aa8.45□□□□□ -1.06
UBE3B-204ENST00000449510 H7BZZ5 65 aa8.45□□□□□ -1.06
UBE3B-204ENST00000449510 H0Y9J4 135 aa8.45□□□□□ -1.06
UBE3B-204ENST00000449510 LELP1Q5T871 98 aa8.45□□□□□ -1.06
UBE3B-204ENST00000449510 C6orf48Q9UBA6 75 aa8.44□□□□□ -1.06
UBE3B-204ENST00000449510 SMIM29Q86T20 159 aa8.43□□□□□ -1.06
UBE3B-204ENST00000449510 ITPR2Q14571 2701 aa8.43□□□□□ -1.06
UBE3B-204ENST00000449510 LINC01600Q96MT4 127 aa8.43□□□□□ -1.06
UBE3B-204ENST00000449510 A0A096LNT2 108 aa8.42□□□□□ -1.06
UBE3B-204ENST00000449510 C1orf137Q5JT78 98 aa8.42□□□□□ -1.06
UBE3B-204ENST00000449510 PLAC8L1A1L4L8 177 aa8.42□□□□□ -1.06
UBE3B-204ENST00000449510 OXLD1Q5BKU9 147 aa8.42□□□□□ -1.06
UBE3B-204ENST00000449510 LINC00208Q96KT6 92 aa8.42□□□□□ -1.06
UBE3B-204ENST00000449510 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.41□□□□□ -1.06
UBE3B-204ENST00000449510 KIAA0087Q14695 138 aa8.41□□□□□ -1.06
UBE3B-204ENST00000449510 CSMD2Q7Z408 3487 aa8.41□□□□□ -1.06
UBE3B-204ENST00000449510 A0A0G2JQZ4 141 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms