RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 HSD52Q0P140 79 aa9.38□□□□□ -0.91
TNF-208ENST00000449264 SDIM1Q6ZPB5 146 aa9.38□□□□□ -0.91
TNF-208ENST00000449264 Q6ZVH6 145 aa9.38□□□□□ -0.91
TNF-208ENST00000449264 MUSTN1Q8IVN3 82 aa9.38□□□□□ -0.91
TNF-208ENST00000449264 C16orf90A8MZG2 172 aa9.37□□□□□ -0.91
TNF-208ENST00000449264 C9orf129Q5T035 196 aaKnown RBP9.37□□□□□ -0.91
TNF-208ENST00000449264 IFITM1P13164 125 aa9.36□□□□□ -0.91
TNF-208ENST00000449264 TAL2Q16559 108 aa9.36□□□□□ -0.91
TNF-208ENST00000449264 COPS9Q8WXC6 57 aa9.36□□□□□ -0.91
TNF-208ENST00000449264 CEND1Q8N111 149 aa9.35□□□□□ -0.91
TNF-208ENST00000449264 FAM168BA1KXE4 195 aa9.33□□□□□ -0.92
TNF-208ENST00000449264 PANO1I0J062 215 aa9.33□□□□□ -0.92
TNF-208ENST00000449264 RPL24P83731 157 aaKnown RBP9.33□□□□□ -0.92
TNF-208ENST00000449264 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.33□□□□□ -0.92
TNF-208ENST00000449264 HINT1P49773 126 aaPredicted RBP9.32□□□□□ -0.92
TNF-208ENST00000449264 FXYD2P54710 66 aa9.32□□□□□ -0.92
TNF-208ENST00000449264 KRTAP10-1P60331 282 aa9.32□□□□□ -0.92
TNF-208ENST00000449264 FAM19A5Q7Z5A7 132 aaPredicted RBP9.32□□□□□ -0.92
TNF-208ENST00000449264 Q8NDZ9 215 aa9.32□□□□□ -0.92
TNF-208ENST00000449264 A4D1N5 150 aa9.32□□□□□ -0.92
TNF-208ENST00000449264 DPH3Q96FX2 82 aa9.32□□□□□ -0.92
TNF-208ENST00000449264 LINC00474Q9P2X8 69 aa9.32□□□□□ -0.92
TNF-208ENST00000449264 LOC107984156A0A0G2JMH3 177 aa9.31□□□□□ -0.92
TNF-208ENST00000449264 SERTAD4-AS1Q5TG53 156 aa9.31□□□□□ -0.92
TNF-208ENST00000449264 ARL17AQ8IVW1 177 aa9.31□□□□□ -0.92
TNF-208ENST00000449264 SPACA4Q8TDM5 124 aa9.31□□□□□ -0.92
TNF-208ENST00000449264 NCR3O14931 201 aa9.3□□□□□ -0.92
TNF-208ENST00000449264 M0R143 59 aa9.29□□□□□ -0.92
TNF-208ENST00000449264 PRR3P79522 188 aaKnown RBP9.29□□□□□ -0.92
TNF-208ENST00000449264 BATFQ16520 125 aa9.29□□□□□ -0.92
TNF-208ENST00000449264 BVES-AS1Q5T3Y7 98 aa9.29□□□□□ -0.92
TNF-208ENST00000449264 DYNC1H1Q14204 4646 aaKnown RBP9.29□□□□□ -0.92
TNF-208ENST00000449264 LRP1BQ9NZR2 4599 aa9.29□□□□□ -0.92
TNF-208ENST00000449264 DNAH8Q96JB1 4490 aa9.29□□□□□ -0.92
TNF-208ENST00000449264 TMEM238LA0A1B0GVL6 79 aa9.29□□□□□ -0.92
TNF-208ENST00000449264 A0A1W2PNN7 141 aa9.29□□□□□ -0.92
TNF-208ENST00000449264 VPREB1P12018 145 aa9.29□□□□□ -0.92
TNF-208ENST00000449264 LCE2DQ5TA82 110 aaPredicted RBP9.29□□□□□ -0.92
TNF-208ENST00000449264 NKAPP1Q8N9T2 125 aa9.29□□□□□ -0.92
TNF-208ENST00000449264 PPDPFQ9H3Y8 114 aa9.29□□□□□ -0.92
TNF-208ENST00000449264 FAM30AQ9NZY2 134 aa9.28□□□□□ -0.92
TNF-208ENST00000449264 NDUFC2O95298 119 aa9.27□□□□□ -0.93
TNF-208ENST00000449264 KRTAP7-1Q8IUC3 87 aa9.27□□□□□ -0.93
TNF-208ENST00000449264 NHP2Q9NX24 153 aaKnown RBP9.27□□□□□ -0.93
TNF-208ENST00000449264 IGKV2-28A0A075B6P5 120 aa9.26□□□□□ -0.93
TNF-208ENST00000449264 A0A087WYN8 130 aa9.26□□□□□ -0.93
TNF-208ENST00000449264 IGKV2D-28P01615 120 aa9.26□□□□□ -0.93
TNF-208ENST00000449264 PLA2G2DQ9UNK4 145 aa9.26□□□□□ -0.93
TNF-208ENST00000449264 M0QXV9 152 aa9.26□□□□□ -0.93
TNF-208ENST00000449264 GAGE10A6NGK3 116 aa9.25□□□□□ -0.93
TNF-208ENST00000449264 K7ERJ3 54 aa9.25□□□□□ -0.93
TNF-208ENST00000449264 HAMPP81172 84 aa9.25□□□□□ -0.93
TNF-208ENST00000449264 CFC1BP0CG36 223 aa9.24□□□□□ -0.93
TNF-208ENST00000449264 CFC1P0CG37 223 aa9.24□□□□□ -0.93
TNF-208ENST00000449264 Q6ZSA8 131 aa9.24□□□□□ -0.93
TNF-208ENST00000449264 LINC00337Q8N6G1 96 aa9.24□□□□□ -0.93
TNF-208ENST00000449264 OR13C6PQ8NH95 151 aa9.24□□□□□ -0.93
TNF-208ENST00000449264 RAB37Q96AX2 223 aa9.24□□□□□ -0.93
TNF-208ENST00000449264 KRTAP3-3Q9BYR6 98 aa9.24□□□□□ -0.93
TNF-208ENST00000449264 KRTAP3-2Q9BYR7 98 aa9.24□□□□□ -0.93
TNF-208ENST00000449264 C22orf24Q9Y442 160 aa9.24□□□□□ -0.93
TNF-208ENST00000449264 IGLV5-37A0A075B6J1 123 aa9.23□□□□□ -0.93
TNF-208ENST00000449264 A6NDN8 102 aa9.23□□□□□ -0.93
TNF-208ENST00000449264 M0R378 163 aa9.23□□□□□ -0.93
TNF-208ENST00000449264 PHF5AQ7RTV0 110 aaKnown RBP9.23□□□□□ -0.93
TNF-208ENST00000449264 MRPL55Q7Z7F7 128 aaKnown RBP9.23□□□□□ -0.93
TNF-208ENST00000449264 C7orf33Q8WU49 177 aa9.23□□□□□ -0.93
TNF-208ENST00000449264 A0A0B4J2C4 111 aa9.22□□□□□ -0.93
TNF-208ENST00000449264 S100A7L2Q5SY68 101 aa9.22□□□□□ -0.93
TNF-208ENST00000449264 SCXQ7RTU7 201 aa9.22□□□□□ -0.93
TNF-208ENST00000449264 SNHG12Q9BXW3 62 aa9.22□□□□□ -0.93
TNF-208ENST00000449264 PLAC8Q9NZF1 115 aa9.22□□□□□ -0.93
TNF-208ENST00000449264 TRBV10-2A0A0K0K1G8 114 aa9.21□□□□□ -0.93
TNF-208ENST00000449264 RPL13AP40429 203 aaKnown RBP9.21□□□□□ -0.93
TNF-208ENST00000449264 CIRBP-AS1Q8TBR5 109 aa9.21□□□□□ -0.93
TNF-208ENST00000449264 TRAV13-2A0A0B4J235 113 aa9.2□□□□□ -0.94
TNF-208ENST00000449264 TRBV10-3A0A0K0K1G6 114 aa9.2□□□□□ -0.94
TNF-208ENST00000449264 H7C2G1 150 aa9.2□□□□□ -0.94
TNF-208ENST00000449264 LINC00167Q96N53 147 aa9.2□□□□□ -0.94
TNF-208ENST00000449264 RPL37AP8A6NKH3 93 aa9.2□□□□□ -0.94
TNF-208ENST00000449264 A0A1B0GWB2 263 aa9.19□□□□□ -0.94
TNF-208ENST00000449264 UBE2BP63146 152 aa9.19□□□□□ -0.94
TNF-208ENST00000449264 PRO1854Q9UHT4 67 aa9.19□□□□□ -0.94
TNF-208ENST00000449264 LBHQ53QV2 105 aaPredicted RBP9.18□□□□□ -0.94
TNF-208ENST00000449264 APOBP04114 4563 aaKnown RBP9.18□□□□□ -0.94
TNF-208ENST00000449264 IGLV6-57P01721 117 aa9.17□□□□□ -0.94
TNF-208ENST00000449264 Q1RN00 199 aa9.17□□□□□ -0.94
TNF-208ENST00000449264 TMEM126AQ9H061 195 aa9.17□□□□□ -0.94
TNF-208ENST00000449264 EPPK1P58107 5090 aaKnown RBP9.17□□□□□ -0.94
TNF-208ENST00000449264 EPM2AB3EWF7 344 aa9.16□□□□□ -0.94
TNF-208ENST00000449264 IGLV1-50A0A075B6I6 118 aa9.15□□□□□ -0.94
TNF-208ENST00000449264 TRAV23DV6A0A075B6W5 121 aa9.15□□□□□ -0.94
TNF-208ENST00000449264 KRTAP11-1Q8IUC1 163 aa9.13□□□□□ -0.95
TNF-208ENST00000449264 TSPAN13O95857 204 aa9.13□□□□□ -0.95
TNF-208ENST00000449264 XGP55808 180 aa9.13□□□□□ -0.95
TNF-208ENST00000449264 SMIM11BQ8TCY0 68 aa9.13□□□□□ -0.95
TNF-208ENST00000449264 COL5A1-AS1Q5SY13 56 aa9.12□□□□□ -0.95
TNF-208ENST00000449264 PRYO14603 147 aa9.11□□□□□ -0.95
TNF-208ENST00000449264 NAA38Q9BRA0 125 aaKnown RBP9.11□□□□□ -0.95
TNF-208ENST00000449264 KCNQ1DNQ9H478 68 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 256.1 ms