RNA–Protein interactions for RNA: ENST00000449193.6

SKIDA1-202, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS P2 TSL 3 BASIC

Gene SKIDA1, Length 6,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-202ENST00000449193 LINC01546A6NGU7 62 aa12.2□□□□□ -0.46
SKIDA1-202ENST00000449193 WWC2-AS2Q96NR7 200 aa12.19□□□□□ -0.46
SKIDA1-202ENST00000449193 SPATA3Q8NHX4 192 aa12.18□□□□□ -0.46
SKIDA1-202ENST00000449193 PMAIP1Q13794 54 aa12.18□□□□□ -0.46
SKIDA1-202ENST00000449193 PHF5AQ7RTV0 110 aaKnown RBP12.17□□□□□ -0.46
SKIDA1-202ENST00000449193 USP9XQ93008 2570 aaPredicted RBP12.17□□□□□ -0.46
SKIDA1-202ENST00000449193 TYMSOSQ8TAI1 123 aa12.17□□□□□ -0.46
SKIDA1-202ENST00000449193 Q8NBF4 154 aa12.16□□□□□ -0.46
SKIDA1-202ENST00000449193 TLN2Q9Y4G6 2542 aa12.16□□□□□ -0.46
SKIDA1-202ENST00000449193 A0A1B0GW54 56 aa12.15□□□□□ -0.46
SKIDA1-202ENST00000449193 IGLV5-45A0A087WSX0 123 aa12.14□□□□□ -0.47
SKIDA1-202ENST00000449193 PSPHP1O15172 72 aa12.14□□□□□ -0.47
SKIDA1-202ENST00000449193 LINC00588Q9Y4M8 146 aa12.14□□□□□ -0.47
SKIDA1-202ENST00000449193 ELOF1P60002 83 aaKnown RBP12.14□□□□□ -0.47
SKIDA1-202ENST00000449193 SMIM29Q86T20 159 aa12.14□□□□□ -0.47
SKIDA1-202ENST00000449193 Q8NAQ8 132 aa12.14□□□□□ -0.47
SKIDA1-202ENST00000449193 MUC4Q99102 2169 aa12.11□□□□□ -0.47
SKIDA1-202ENST00000449193 COL4A2P08572 1712 aa12.11□□□□□ -0.47
SKIDA1-202ENST00000449193 Q6ZRX8 168 aa12.11□□□□□ -0.47
SKIDA1-202ENST00000449193 PLA2G1BP04054 148 aaKnown RBP12.11□□□□□ -0.47
SKIDA1-202ENST00000449193 EPM2AB3EWF7 344 aa12.1□□□□□ -0.47
SKIDA1-202ENST00000449193 ACYP2P14621 99 aa12.09□□□□□ -0.47
SKIDA1-202ENST00000449193 LINC00313P59037 77 aa12.08□□□□□ -0.47
SKIDA1-202ENST00000449193 CHTF8P0CG12 524 aa12.08□□□□□ -0.48
SKIDA1-202ENST00000449193 GVQW2A0A096LPI5 108 aaPredicted RBP12.08□□□□□ -0.48
SKIDA1-202ENST00000449193 LINC00476Q8WZB0 136 aa12.08□□□□□ -0.48
SKIDA1-202ENST00000449193 CHD8Q9HCK8 2581 aa12.07□□□□□ -0.48
SKIDA1-202ENST00000449193 ZNF462Q96JM2 2506 aa12.06□□□□□ -0.48
SKIDA1-202ENST00000449193 A0A1B0GU69 56 aa12.06□□□□□ -0.48
SKIDA1-202ENST00000449193 BCE1O60756 84 aa12.06□□□□□ -0.48
SKIDA1-202ENST00000449193 J3QL48 77 aa12.06□□□□□ -0.48
SKIDA1-202ENST00000449193 ANKRD11Q6UB99 2663 aaPredicted RBP12.05□□□□□ -0.48
SKIDA1-202ENST00000449193 DNAH10OSP0CZ25 163 aa12.03□□□□□ -0.48
SKIDA1-202ENST00000449193 Q9UF83 564 aa12.03□□□□□ -0.48
SKIDA1-202ENST00000449193 RPL37AP61513 92 aaKnown RBP12.02□□□□□ -0.49
SKIDA1-202ENST00000449193 PTPRBP23467 1997 aa12.01□□□□□ -0.49
SKIDA1-202ENST00000449193 ATP11AUNQ6ZP68 121 aa12.01□□□□□ -0.49
SKIDA1-202ENST00000449193 H3BPC8 53 aa12□□□□□ -0.49
SKIDA1-202ENST00000449193 USP9YO00507 2555 aaPredicted RBP11.98□□□□□ -0.49
SKIDA1-202ENST00000449193 CEP295Q9C0D2 2601 aa11.98□□□□□ -0.49
SKIDA1-202ENST00000449193 ST20-AS1Q8NBB2 130 aa11.98□□□□□ -0.49
SKIDA1-202ENST00000449193 FAM218AQ96MZ4 157 aa11.98□□□□□ -0.49
SKIDA1-202ENST00000449193 LOC110117498A0A087WWA1 95 aa11.98□□□□□ -0.49
SKIDA1-202ENST00000449193 Q6ZQT0 140 aa11.97□□□□□ -0.49
SKIDA1-202ENST00000449193 SETD2Q9BYW2 2564 aaPredicted RBP11.97□□□□□ -0.49
SKIDA1-202ENST00000449193 Q96NJ1 140 aa11.97□□□□□ -0.49
SKIDA1-202ENST00000449193 COL27A1Q8IZC6 1860 aaPredicted RBP11.97□□□□□ -0.49
SKIDA1-202ENST00000449193 KLK9Q2XQG4 91 aa11.94□□□□□ -0.5
SKIDA1-202ENST00000449193 TRAV22A0A0B4J277 110 aa11.94□□□□□ -0.5
SKIDA1-202ENST00000449193 PKD1L2Q7Z442 2459 aa11.94□□□□□ -0.5
SKIDA1-202ENST00000449193 C8orf87E5RJ46 101 aa11.93□□□□□ -0.5
SKIDA1-202ENST00000449193 CDIP1Q9H305 208 aa11.93□□□□□ -0.5
SKIDA1-202ENST00000449193 TRBV7-4A0A0J9YYF1 115 aa11.9□□□□□ -0.5
SKIDA1-202ENST00000449193 VPREB1P12018 145 aa11.89□□□□□ -0.51
SKIDA1-202ENST00000449193 K7EIL1 84 aa11.89□□□□□ -0.51
SKIDA1-202ENST00000449193 WDR87Q6ZQQ6 2873 aa11.87□□□□□ -0.51
SKIDA1-202ENST00000449193 FAM168BA1KXE4 195 aa11.87□□□□□ -0.51
SKIDA1-202ENST00000449193 SPAG11AQ6PDA7 123 aa11.86□□□□□ -0.51
SKIDA1-202ENST00000449193 LOC101927531A0A1B0GV80 90 aa11.86□□□□□ -0.51
SKIDA1-202ENST00000449193 IGLV6-57P01721 117 aa11.86□□□□□ -0.51
SKIDA1-202ENST00000449193 KRTAP10-11P60412 298 aa11.85□□□□□ -0.51
SKIDA1-202ENST00000449193 COX6B2Q6YFQ2 88 aa11.85□□□□□ -0.51
SKIDA1-202ENST00000449193 SMCPP49901 116 aaPredicted RBP11.84□□□□□ -0.51
SKIDA1-202ENST00000449193 CSNK1G2-AS1Q8NCQ2 148 aa11.84□□□□□ -0.51
SKIDA1-202ENST00000449193 A8MWP4 228 aa11.84□□□□□ -0.51
SKIDA1-202ENST00000449193 IGLV1-50A0A075B6I6 118 aa11.84□□□□□ -0.51
SKIDA1-202ENST00000449193 MTORP42345 2549 aa11.83□□□□□ -0.52
SKIDA1-202ENST00000449193 C19orf73Q9NVV2 129 aa11.83□□□□□ -0.52
SKIDA1-202ENST00000449193 FASNP49327 2511 aaKnown RBP11.83□□□□□ -0.52
SKIDA1-202ENST00000449193 SPTBN4Q9H254 2564 aa11.82□□□□□ -0.52
SKIDA1-202ENST00000449193 SERTAD4-AS1Q5TG53 156 aa11.82□□□□□ -0.52
SKIDA1-202ENST00000449193 MRPL34Q9BQ48 92 aaKnown RBP11.81□□□□□ -0.52
SKIDA1-202ENST00000449193 KCNQ1DNQ9H478 68 aa11.8□□□□□ -0.52
SKIDA1-202ENST00000449193 LINC00304Q8N9R0 145 aa11.79□□□□□ -0.52
SKIDA1-202ENST00000449193 ANKRD17O75179 2603 aaKnown RBP11.77□□□□□ -0.52
SKIDA1-202ENST00000449193 PRO0461Q9UI25 63 aa11.77□□□□□ -0.53
SKIDA1-202ENST00000449193 SSBP3-AS1Q7Z2R9 100 aa11.76□□□□□ -0.53
SKIDA1-202ENST00000449193 ZNF861PO60384 105 aa11.76□□□□□ -0.53
SKIDA1-202ENST00000449193 LITAFQ99732 161 aa11.75□□□□□ -0.53
SKIDA1-202ENST00000449193 TM2D3Q9BRN9 247 aa11.75□□□□□ -0.53
SKIDA1-202ENST00000449193 A0A087WTM6 91 aa11.74□□□□□ -0.53
SKIDA1-202ENST00000449193 IGLV8-61A0A075B6I0 122 aa11.74□□□□□ -0.53
SKIDA1-202ENST00000449193 PRR34Q9NV39 138 aa11.74□□□□□ -0.53
SKIDA1-202ENST00000449193 F8P00451 2351 aa11.73□□□□□ -0.53
SKIDA1-202ENST00000449193 LINC00336Q6ZUF6 198 aa11.71□□□□□ -0.53
SKIDA1-202ENST00000449193 K7EQZ3 153 aa11.71□□□□□ -0.53
SKIDA1-202ENST00000449193 LINC00528Q8N1L1 170 aa11.71□□□□□ -0.53
SKIDA1-202ENST00000449193 A0A096LNT2 108 aa11.71□□□□□ -0.54
SKIDA1-202ENST00000449193 C15orf56Q8N910 161 aa11.71□□□□□ -0.54
SKIDA1-202ENST00000449193 IGFL1Q6UW32 110 aa11.69□□□□□ -0.54
SKIDA1-202ENST00000449193 DSCR10P59022 87 aa11.69□□□□□ -0.54
SKIDA1-202ENST00000449193 ACANP16112 2415 aa11.68□□□□□ -0.54
SKIDA1-202ENST00000449193 KRTAP10-3P60369 221 aa11.68□□□□□ -0.54
SKIDA1-202ENST00000449193 PCSK5Q92824 1860 aa11.68□□□□□ -0.54
SKIDA1-202ENST00000449193 C9orf163Q8N9P6 203 aa11.67□□□□□ -0.54
SKIDA1-202ENST00000449193 POLQO75417 2590 aa11.67□□□□□ -0.54
SKIDA1-202ENST00000449193 PRO0628Q9UI54 55 aa11.67□□□□□ -0.54
SKIDA1-202ENST00000449193 SMR3BP02814 79 aaPredicted RBP11.66□□□□□ -0.54
SKIDA1-202ENST00000449193 C8orf17Q9NRJ1 99 aa11.66□□□□□ -0.54
SKIDA1-202ENST00000449193 TLX1NBP0CAT3 122 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms