RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 SEC11AP67812 179 aa3.22□□□□□ -1.89
USP49-205ENST00000448078 KIAA0087Q14695 138 aa3.22□□□□□ -1.89
USP49-205ENST00000448078 Q6ZUT4 128 aa3.22□□□□□ -1.89
USP49-205ENST00000448078 FAM19A1Q7Z5A9 133 aa3.22□□□□□ -1.89
USP49-205ENST00000448078 C20orf78Q9BR46 151 aa3.22□□□□□ -1.89
USP49-205ENST00000448078 MUC17Q685J3 4493 aa3.22□□□□□ -1.89
USP49-205ENST00000448078 IGLV8-61A0A075B6I0 122 aa3.21□□□□□ -1.9
USP49-205ENST00000448078 LINC00862A6NCI5 91 aa3.21□□□□□ -1.9
USP49-205ENST00000448078 F8VRH5 84 aa3.21□□□□□ -1.9
USP49-205ENST00000448078 CXCL5P42830 114 aa3.21□□□□□ -1.9
USP49-205ENST00000448078 MT1HP80294 61 aa3.21□□□□□ -1.9
USP49-205ENST00000448078 TEX43Q6ZNM6 134 aa3.21□□□□□ -1.9
USP49-205ENST00000448078 GEMIN7Q9H840 131 aaKnown RBP3.21□□□□□ -1.9
USP49-205ENST00000448078 LINC00846Q9NV44 126 aa3.21□□□□□ -1.9
USP49-205ENST00000448078 KANTRA0A1W2PQU2 76 aa3.2□□□□□ -1.9
USP49-205ENST00000448078 ARPC5O15511 151 aa3.2□□□□□ -1.9
USP49-205ENST00000448078 CKS2P33552 79 aa3.2□□□□□ -1.9
USP49-205ENST00000448078 Q8IZM0 81 aa3.2□□□□□ -1.9
USP49-205ENST00000448078 PLEKHB2Q96CS7 222 aa3.2□□□□□ -1.9
USP49-205ENST00000448078 KRTAP4-1Q9BYQ7 146 aa3.2□□□□□ -1.9
USP49-205ENST00000448078 VCX2Q9H322 139 aa3.2□□□□□ -1.9
USP49-205ENST00000448078 SERF1AO75920 110 aa3.19□□□□□ -1.9
USP49-205ENST00000448078 G0S2P27469 103 aa3.19□□□□□ -1.9
USP49-205ENST00000448078 AMN1Q8IY45 258 aa3.19□□□□□ -1.9
USP49-205ENST00000448078 C3orf22Q8N5N4 141 aa3.19□□□□□ -1.9
USP49-205ENST00000448078 TMEM141Q96I45 108 aa3.19□□□□□ -1.9
USP49-205ENST00000448078 HIGD2AQ9BW72 106 aa3.19□□□□□ -1.9
USP49-205ENST00000448078 IGKV2-28A0A075B6P5 120 aa3.18□□□□□ -1.9
USP49-205ENST00000448078 HIGD1CA8MV81 97 aa3.18□□□□□ -1.9
USP49-205ENST00000448078 IGKV2D-28P01615 120 aa3.18□□□□□ -1.9
USP49-205ENST00000448078 S100A8P05109 93 aa3.18□□□□□ -1.9
USP49-205ENST00000448078 RPS29P62273 56 aaKnown RBP3.18□□□□□ -1.9
USP49-205ENST00000448078 RPL39P62891 51 aaKnown RBP3.18□□□□□ -1.9
USP49-205ENST00000448078 S100A12P80511 92 aa3.18□□□□□ -1.9
USP49-205ENST00000448078 PRLHP81277 87 aa3.18□□□□□ -1.9
USP49-205ENST00000448078 Q5BKY6 102 aa3.18□□□□□ -1.9
USP49-205ENST00000448078 FAM231DQ6ZW35 169 aa3.18□□□□□ -1.9
USP49-205ENST00000448078 SSBP3-AS1Q7Z2R9 100 aa3.18□□□□□ -1.9
USP49-205ENST00000448078 KRTAP13-1Q8IUC0 172 aa3.18□□□□□ -1.9
USP49-205ENST00000448078 TRBV24-1A0A075B6N3 115 aa3.17□□□□□ -1.9
USP49-205ENST00000448078 A0A1B0GW15 77 aa3.17□□□□□ -1.9
USP49-205ENST00000448078 F8W036 122 aa3.17□□□□□ -1.9
USP49-205ENST00000448078 SMKR1H3BMG3 65 aa3.17□□□□□ -1.9
USP49-205ENST00000448078 RAB5BP61020 215 aa3.17□□□□□ -1.9
USP49-205ENST00000448078 HERVK_113P63121 156 aa3.17□□□□□ -1.9
USP49-205ENST00000448078 PCOTHQ58A44 107 aa3.17□□□□□ -1.9
USP49-205ENST00000448078 CEND1Q8N111 149 aa3.17□□□□□ -1.9
USP49-205ENST00000448078 EIF5A2Q9GZV4 153 aaKnown RBP3.17□□□□□ -1.9
USP49-205ENST00000448078 TMEM126AQ9H061 195 aa3.17□□□□□ -1.9
USP49-205ENST00000448078 ATP5LO75964 103 aa3.16□□□□□ -1.9
USP49-205ENST00000448078 PPBPP02775 128 aa3.16□□□□□ -1.9
USP49-205ENST00000448078 FAM104BQ5XKR9 115 aa3.16□□□□□ -1.9
USP49-205ENST00000448078 AKAP14Q86UN6 197 aa3.16□□□□□ -1.9
USP49-205ENST00000448078 SPRR4Q96PI1 79 aa3.16□□□□□ -1.9
USP49-205ENST00000448078 SMIM2Q9BVW6 85 aa3.16□□□□□ -1.9
USP49-205ENST00000448078 ZNF345Q14585 488 aa3.15□□□□□ -1.91
USP49-205ENST00000448078 MRPL51Q4U2R6 128 aaKnown RBP3.15□□□□□ -1.91
USP49-205ENST00000448078 NAT8BQ9UHF3 227 aa3.15□□□□□ -1.91
USP49-205ENST00000448078 TMEM250H0YL14 139 aa3.14□□□□□ -1.91
USP49-205ENST00000448078 K7EN84 100 aa3.14□□□□□ -1.91
USP49-205ENST00000448078 CEBPGP53567 150 aa3.14□□□□□ -1.91
USP49-205ENST00000448078 IFITM3Q01628 133 aa3.14□□□□□ -1.91
USP49-205ENST00000448078 PDZD11Q5EBL8 140 aa3.14□□□□□ -1.91
USP49-205ENST00000448078 COX7B2Q8TF08 81 aa3.14□□□□□ -1.91
USP49-205ENST00000448078 CYSLTR1Q9Y271 337 aa3.14□□□□□ -1.91
USP49-205ENST00000448078 HMSDA8MTL9 139 aa3.13□□□□□ -1.91
USP49-205ENST00000448078 TMEM238C9JI98 176 aa3.13□□□□□ -1.91
USP49-205ENST00000448078 RAB14P61106 215 aa3.13□□□□□ -1.91
USP49-205ENST00000448078 LIMD2Q9BT23 127 aa3.13□□□□□ -1.91
USP49-205ENST00000448078 OSTCQ9NRP0 149 aa3.13□□□□□ -1.91
USP49-205ENST00000448078 LOC389332A0A1B0GUA5 103 aa3.12□□□□□ -1.91
USP49-205ENST00000448078 ETDCA0A1B0GVM5 59 aa3.12□□□□□ -1.91
USP49-205ENST00000448078 D6R8Y8 96 aa3.12□□□□□ -1.91
USP49-205ENST00000448078 E9PLD3 99 aa3.12□□□□□ -1.91
USP49-205ENST00000448078 H3BRM9 83 aa3.12□□□□□ -1.91
USP49-205ENST00000448078 M0R378 163 aa3.12□□□□□ -1.91
USP49-205ENST00000448078 PFN2P35080 140 aa3.12□□□□□ -1.91
USP49-205ENST00000448078 COX17Q14061 63 aa3.12□□□□□ -1.91
USP49-205ENST00000448078 ORMDL2Q53FV1 153 aa3.12□□□□□ -1.91
USP49-205ENST00000448078 Q6Q795 121 aa3.12□□□□□ -1.91
USP49-205ENST00000448078 TMEM136Q6ZRR5 245 aa3.12□□□□□ -1.91
USP49-205ENST00000448078 ORMDL3Q8N138 153 aa3.12□□□□□ -1.91
USP49-205ENST00000448078 SMCR5Q8TEV8 140 aa3.12□□□□□ -1.91
USP49-205ENST00000448078 FAM104AQ969W3 186 aa3.12□□□□□ -1.91
USP49-205ENST00000448078 CDKN2A-AS1Q9UH64 79 aa3.12□□□□□ -1.91
USP49-205ENST00000448078 K7EMI3 77 aa3.11□□□□□ -1.91
USP49-205ENST00000448078 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
USP49-205ENST00000448078 MOBPQ13875 183 aa3.11□□□□□ -1.91
USP49-205ENST00000448078 SFTA2Q6UW10 78 aa3.11□□□□□ -1.91
USP49-205ENST00000448078 AMELXQ99217 191 aa3.11□□□□□ -1.91
USP49-205ENST00000448078 TIMM17AQ99595 171 aa3.11□□□□□ -1.91
USP49-205ENST00000448078 SMIM7Q9BQ49 75 aa3.11□□□□□ -1.91
USP49-205ENST00000448078 C9orf92A6NGG3 77 aa3.1□□□□□ -1.91
USP49-205ENST00000448078 LINC01549A6NIU2 74 aa3.1□□□□□ -1.91
USP49-205ENST00000448078 KRTAP19-2Q3LHN2 52 aa3.1□□□□□ -1.91
USP49-205ENST00000448078 FAM74A3Q4VXF1 159 aa3.1□□□□□ -1.91
USP49-205ENST00000448078 FAM19A3Q7Z5A8 133 aa3.1□□□□□ -1.91
USP49-205ENST00000448078 PRELID3AQ96N28 172 aa3.1□□□□□ -1.91
USP49-205ENST00000448078 MAP1LC3AQ9H492 121 aa3.1□□□□□ -1.91
USP49-205ENST00000448078 LAMTOR2Q9Y2Q5 125 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms