RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 HIGD1BQ9P298 99 aa-1.05□□□□□ -2.58
SNHG3-203ENST00000447507 NBEAQ8NFP9 2946 aa-1.05□□□□□ -2.58
SNHG3-203ENST00000447507 TOP2BQ02880 1626 aa-1.05□□□□□ -2.58
SNHG3-203ENST00000447507 SPTBN5Q9NRC6 3674 aaKnown RBP-1.05□□□□□ -2.58
SNHG3-203ENST00000447507 RANBP2P49792 3224 aaKnown RBP-1.06□□□□□ -2.58
SNHG3-203ENST00000447507 UTP20O75691 2785 aaKnown RBP-1.06□□□□□ -2.58
SNHG3-203ENST00000447507 OOSP1A8MZH6 123 aa-1.06□□□□□ -2.58
SNHG3-203ENST00000447507 K7EP13 123 aa-1.06□□□□□ -2.58
SNHG3-203ENST00000447507 DEFB1P60022 68 aa-1.06□□□□□ -2.58
SNHG3-203ENST00000447507 GNG11P61952 73 aa-1.06□□□□□ -2.58
SNHG3-203ENST00000447507 SMIM21Q3B7S5 101 aa-1.06□□□□□ -2.58
SNHG3-203ENST00000447507 Q56UQ5 140 aa-1.06□□□□□ -2.58
SNHG3-203ENST00000447507 C9orf153Q5TBE3 101 aa-1.06□□□□□ -2.58
SNHG3-203ENST00000447507 ANP32BQ92688 251 aaKnown RBP-1.06□□□□□ -2.58
SNHG3-203ENST00000447507 PPP3R2Q96LZ3 170 aa-1.06□□□□□ -2.58
SNHG3-203ENST00000447507 COPZ2Q9P299 210 aa-1.06□□□□□ -2.58
SNHG3-203ENST00000447507 MYO9AB2RTY4 2548 aa-1.06□□□□□ -2.58
SNHG3-203ENST00000447507 CUX1P39880 1505 aa-1.06□□□□□ -2.58
SNHG3-203ENST00000447507 MAP3K1Q13233 1512 aa-1.06□□□□□ -2.58
SNHG3-203ENST00000447507 KNDC1Q76NI1 1749 aa-1.06□□□□□ -2.58
SNHG3-203ENST00000447507 KIAA1551Q9HCM1 1747 aa-1.06□□□□□ -2.58
SNHG3-203ENST00000447507 ANKRD36A6QL64 1941 aa-1.07□□□□□ -2.58
SNHG3-203ENST00000447507 PDCD11Q14690 1871 aaKnown RBP-1.07□□□□□ -2.58
SNHG3-203ENST00000447507 SPENQ96T58 3664 aaKnown RBP-1.07□□□□□ -2.58
SNHG3-203ENST00000447507 FOCADQ5VW36 1801 aa-1.07□□□□□ -2.58
SNHG3-203ENST00000447507 SPTY2D1-AS1A0A0U1RR47 76 aa-1.07□□□□□ -2.58
SNHG3-203ENST00000447507 TRAPPC2P0DI81 140 aa-1.07□□□□□ -2.58
SNHG3-203ENST00000447507 TRAPPC2BP0DI82 140 aa-1.07□□□□□ -2.58
SNHG3-203ENST00000447507 SAA2P0DJI9 122 aaPredicted RBP-1.07□□□□□ -2.58
SNHG3-203ENST00000447507 ASIPP42127 132 aa-1.07□□□□□ -2.58
SNHG3-203ENST00000447507 ARPC4P59998 168 aa-1.07□□□□□ -2.58
SNHG3-203ENST00000447507 DEFB110Q30KQ9 67 aa-1.07□□□□□ -2.58
SNHG3-203ENST00000447507 SNRNP25Q9BV90 132 aaKnown RBP-1.07□□□□□ -2.58
SNHG3-203ENST00000447507 LINC00846Q9NV44 126 aa-1.07□□□□□ -2.58
SNHG3-203ENST00000447507 LRRK2Q5S007 2527 aa-1.07□□□□□ -2.58
SNHG3-203ENST00000447507 LRRC37AA6NMS7 1700 aa-1.07□□□□□ -2.58
SNHG3-203ENST00000447507 TCHHQ07283 1943 aa-1.07□□□□□ -2.58
SNHG3-203ENST00000447507 TARBP1Q13395 1621 aaKnown RBP-1.07□□□□□ -2.58
SNHG3-203ENST00000447507 DIP2CQ9Y2E4 1556 aa-1.08□□□□□ -2.58
SNHG3-203ENST00000447507 CSMD1Q96PZ7 3565 aa-1.08□□□□□ -2.58
SNHG3-203ENST00000447507 BCORQ6W2J9 1755 aa-1.08□□□□□ -2.58
SNHG3-203ENST00000447507 SCN11AQ9UI33 1791 aa-1.08□□□□□ -2.58
SNHG3-203ENST00000447507 CEP152O94986 1710 aa-1.08□□□□□ -2.58
SNHG3-203ENST00000447507 C4AP0C0L4 1744 aa-1.08□□□□□ -2.58
SNHG3-203ENST00000447507 C4BP0C0L5 1744 aa-1.08□□□□□ -2.58
SNHG3-203ENST00000447507 A0A0G2JND7 137 aa-1.08□□□□□ -2.58
SNHG3-203ENST00000447507 H0Y9P7 68 aa-1.08□□□□□ -2.58
SNHG3-203ENST00000447507 GNG7O60262 68 aa-1.08□□□□□ -2.58
SNHG3-203ENST00000447507 NDUFA3O95167 84 aa-1.08□□□□□ -2.58
SNHG3-203ENST00000447507 COPS9Q8WXC6 57 aa-1.08□□□□□ -2.58
SNHG3-203ENST00000447507 LZICQ8WZA0 190 aa-1.08□□□□□ -2.58
SNHG3-203ENST00000447507 ARL11Q969Q4 196 aa-1.08□□□□□ -2.58
SNHG3-203ENST00000447507 CLIP1P30622 1438 aa-1.08□□□□□ -2.58
SNHG3-203ENST00000447507 DNAH17Q9UFH2 4485 aa-1.09□□□□□ -2.58
SNHG3-203ENST00000447507 TRRAPQ9Y4A5 3859 aa-1.09□□□□□ -2.58
SNHG3-203ENST00000447507 FAM186AA6NE01 2351 aa-1.09□□□□□ -2.58
SNHG3-203ENST00000447507 TRBV7-7A0A0K0K1E9 115 aa-1.09□□□□□ -2.58
SNHG3-203ENST00000447507 C7orf77A4D0Y5 90 aa-1.09□□□□□ -2.58
SNHG3-203ENST00000447507 APOC2P02655 101 aa-1.09□□□□□ -2.58
SNHG3-203ENST00000447507 GNGT1P63211 74 aa-1.09□□□□□ -2.58
SNHG3-203ENST00000447507 MT1XP80297 61 aa-1.09□□□□□ -2.58
SNHG3-203ENST00000447507 C8orf59Q8N0T1 100 aaPredicted RBP-1.09□□□□□ -2.58
SNHG3-203ENST00000447507 DPH3P1Q9H4G8 78 aa-1.09□□□□□ -2.58
SNHG3-203ENST00000447507 PRO1854Q9UHT4 67 aa-1.09□□□□□ -2.58
SNHG3-203ENST00000447507 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.09□□□□□ -2.58
SNHG3-203ENST00000447507 SRCAPQ6ZRS2 3230 aa-1.09□□□□□ -2.58
SNHG3-203ENST00000447507 SCAPERQ9BY12 1400 aa-1.09□□□□□ -2.58
SNHG3-203ENST00000447507 RGPD2P0DJD1 1756 aa-1.09□□□□□ -2.58
SNHG3-203ENST00000447507 C5orf42Q9H799 3197 aa-1.09□□□□□ -2.58
SNHG3-203ENST00000447507 CEP295Q9C0D2 2601 aa-1.09□□□□□ -2.58
SNHG3-203ENST00000447507 A2ML1A8K2U0 1454 aa-1.1□□□□□ -2.59
SNHG3-203ENST00000447507 MRC2Q9UBG0 1479 aa-1.1□□□□□ -2.59
SNHG3-203ENST00000447507 UBE2L5PA0A1B0GUS4 154 aa-1.1□□□□□ -2.59
SNHG3-203ENST00000447507 FAM25AB3EWG3 89 aa-1.1□□□□□ -2.59
SNHG3-203ENST00000447507 FAM25CB3EWG5 89 aa-1.1□□□□□ -2.59
SNHG3-203ENST00000447507 FAM25GB3EWG6 89 aa-1.1□□□□□ -2.59
SNHG3-203ENST00000447507 COX6CP09669 75 aa-1.1□□□□□ -2.59
SNHG3-203ENST00000447507 ARMS2P0C7Q2 107 aa-1.1□□□□□ -2.59
SNHG3-203ENST00000447507 FGF7P21781 194 aa-1.1□□□□□ -2.59
SNHG3-203ENST00000447507 UBE2L3P68036 154 aaKnown RBP-1.1□□□□□ -2.59
SNHG3-203ENST00000447507 PFDN5Q99471 154 aa-1.1□□□□□ -2.59
SNHG3-203ENST00000447507 C12orf57Q99622 126 aa-1.1□□□□□ -2.59
SNHG3-203ENST00000447507 ALKQ9UM73 1620 aa-1.11□□□□□ -2.59
SNHG3-203ENST00000447507 SMG1Q96Q15 3661 aaKnown RBP-1.11□□□□□ -2.59
SNHG3-203ENST00000447507 F6UZH7 168 aa-1.11□□□□□ -2.59
SNHG3-203ENST00000447507 H3BQF6 201 aa-1.11□□□□□ -2.59
SNHG3-203ENST00000447507 K7EP34 96 aa-1.11□□□□□ -2.59
SNHG3-203ENST00000447507 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.11□□□□□ -2.59
SNHG3-203ENST00000447507 LINC00470Q9BZP3 86 aa-1.11□□□□□ -2.59
SNHG3-203ENST00000447507 MON2Q7Z3U7 1717 aa-1.12□□□□□ -2.59
SNHG3-203ENST00000447507 DNAH5Q8TE73 4624 aa-1.12□□□□□ -2.59
SNHG3-203ENST00000447507 FRYQ5TBA9 3013 aa-1.12□□□□□ -2.59
SNHG3-203ENST00000447507 DMXL2Q8TDJ6 3036 aa-1.12□□□□□ -2.59
SNHG3-203ENST00000447507 PREX1Q8TCU6 1659 aa-1.12□□□□□ -2.59
SNHG3-203ENST00000447507 CRYM-AS1A6NIL9 109 aa-1.12□□□□□ -2.59
SNHG3-203ENST00000447507 PYDC1Q8WXC3 89 aa-1.12□□□□□ -2.59
SNHG3-203ENST00000447507 CHD7Q9P2D1 2997 aa-1.12□□□□□ -2.59
SNHG3-203ENST00000447507 SAMD9Q5K651 1589 aa-1.13□□□□□ -2.59
SNHG3-203ENST00000447507 SHPRHQ149N8 1683 aa-1.13□□□□□ -2.59
SNHG3-203ENST00000447507 TOPAZ1Q8N9V7 1692 aa-1.13□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms