RNA–Protein interactions for RNA: ENST00000447271.1

PTPN3-205, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 2

Gene PTPN3, Length 587 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-205ENST00000447271 A0A0U1RQV1 116 aa4.07□□□□□ -1.76
PTPN3-205ENST00000447271 SPINK8P0C7L1 97 aa4.07□□□□□ -1.76
PTPN3-205ENST00000447271 MALP21145 153 aa4.07□□□□□ -1.76
PTPN3-205ENST00000447271 DAD1P61803 113 aa4.07□□□□□ -1.76
PTPN3-205ENST00000447271 FAM222AQ5U5X8 452 aa4.07□□□□□ -1.76
PTPN3-205ENST00000447271 CSNK1G2-AS1Q8NCQ2 148 aa4.07□□□□□ -1.76
PTPN3-205ENST00000447271 COX7B2Q8TF08 81 aa4.07□□□□□ -1.76
PTPN3-205ENST00000447271 LINC01600Q96MT4 127 aa4.07□□□□□ -1.76
PTPN3-205ENST00000447271 OPRPNQ99935 248 aaPredicted RBP4.07□□□□□ -1.76
PTPN3-205ENST00000447271 DNAH5Q8TE73 4624 aa4.07□□□□□ -1.76
PTPN3-205ENST00000447271 SORL1Q92673 2214 aa4.06□□□□□ -1.76
PTPN3-205ENST00000447271 IGHV3-64A0A075B6Q5 118 aa4.06□□□□□ -1.76
PTPN3-205ENST00000447271 A0A087WZ39 114 aa4.06□□□□□ -1.76
PTPN3-205ENST00000447271 TRAV8-4A0A0B4J246 113 aa4.06□□□□□ -1.76
PTPN3-205ENST00000447271 A0A1B0GV72 72 aa4.06□□□□□ -1.76
PTPN3-205ENST00000447271 C9JAW5 83 aa4.06□□□□□ -1.76
PTPN3-205ENST00000447271 F8WDY8 70 aa4.06□□□□□ -1.76
PTPN3-205ENST00000447271 CRPP02741 224 aa4.06□□□□□ -1.76
PTPN3-205ENST00000447271 DEFB130BP0DP73 79 aa4.06□□□□□ -1.76
PTPN3-205ENST00000447271 DEFB130AP0DP74 79 aa4.06□□□□□ -1.76
PTPN3-205ENST00000447271 LINC00158P58513 81 aa4.06□□□□□ -1.76
PTPN3-205ENST00000447271 WFDC2Q14508 124 aa4.06□□□□□ -1.76
PTPN3-205ENST00000447271 C2orf82Q6UX34 121 aa4.06□□□□□ -1.76
PTPN3-205ENST00000447271 Q6ZUT4 128 aa4.06□□□□□ -1.76
PTPN3-205ENST00000447271 LINC00308Q8TCZ7 52 aa4.06□□□□□ -1.76
PTPN3-205ENST00000447271 ICOSQ9Y6W8 199 aa4.06□□□□□ -1.76
PTPN3-205ENST00000447271 A0A1B0GX51 115 aa4.05□□□□□ -1.76
PTPN3-205ENST00000447271 KRTAP23-1A1A580 65 aa4.05□□□□□ -1.76
PTPN3-205ENST00000447271 NUPR2A6NF83 97 aa4.05□□□□□ -1.76
PTPN3-205ENST00000447271 H3BNG1 76 aa4.05□□□□□ -1.76
PTPN3-205ENST00000447271 H7C2G1 150 aa4.05□□□□□ -1.76
PTPN3-205ENST00000447271 TRACP01848 142 aa4.05□□□□□ -1.76
PTPN3-205ENST00000447271 GYPEP15421 78 aa4.05□□□□□ -1.76
PTPN3-205ENST00000447271 LINC01620Q4KN68 170 aa4.05□□□□□ -1.76
PTPN3-205ENST00000447271 CD164L2Q6UWJ8 174 aa4.05□□□□□ -1.76
PTPN3-205ENST00000447271 Q8IZM0 81 aa4.05□□□□□ -1.76
PTPN3-205ENST00000447271 LINC00612Q8N6U2 182 aa4.05□□□□□ -1.76
PTPN3-205ENST00000447271 NAA38Q9BRA0 125 aaKnown RBP4.05□□□□□ -1.76
PTPN3-205ENST00000447271 AGRNO00468 2067 aa4.05□□□□□ -1.76
PTPN3-205ENST00000447271 TRAV8-3A0A0A6YYJ7 113 aa4.04□□□□□ -1.76
PTPN3-205ENST00000447271 FAM240AA0A1B0GVK7 77 aa4.04□□□□□ -1.76
PTPN3-205ENST00000447271 COX7A2LO14548 114 aa4.04□□□□□ -1.76
PTPN3-205ENST00000447271 TCL1BO95988 128 aa4.04□□□□□ -1.76
PTPN3-205ENST00000447271 CEMP1Q6PRD7 247 aaPredicted RBP4.04□□□□□ -1.76
PTPN3-205ENST00000447271 LINC00959A0A1B0GUT2 108 aa4.03□□□□□ -1.76
PTPN3-205ENST00000447271 SMIM1B2RUZ4 78 aa4.03□□□□□ -1.76
PTPN3-205ENST00000447271 TSPEAR-AS2P59090 65 aa4.03□□□□□ -1.76
PTPN3-205ENST00000447271 GAGE6Q13070 117 aa4.03□□□□□ -1.76
PTPN3-205ENST00000447271 S100A7L2Q5SY68 101 aa4.03□□□□□ -1.76
PTPN3-205ENST00000447271 NTM-AS1Q6ZSK4 140 aa4.03□□□□□ -1.76
PTPN3-205ENST00000447271 DEFB104AQ8WTQ1 72 aa4.03□□□□□ -1.76
PTPN3-205ENST00000447271 UBE2WQ96B02 151 aa4.03□□□□□ -1.76
PTPN3-205ENST00000447271 ZNF625Q96I27 306 aaPredicted RBP4.03□□□□□ -1.76
PTPN3-205ENST00000447271 TMEM126AQ9H061 195 aa4.03□□□□□ -1.76
PTPN3-205ENST00000447271 SND1-IT1Q9HBX3 110 aa4.03□□□□□ -1.76
PTPN3-205ENST00000447271 TOMM7Q9P0U1 55 aa4.03□□□□□ -1.76
PTPN3-205ENST00000447271 IGHV3OR16-9A0A0B4J2B5 98 aa4.02□□□□□ -1.77
PTPN3-205ENST00000447271 A8MZ25 164 aa4.02□□□□□ -1.77
PTPN3-205ENST00000447271 F5H768 121 aa4.02□□□□□ -1.77
PTPN3-205ENST00000447271 LST1O00453 97 aa4.02□□□□□ -1.77
PTPN3-205ENST00000447271 NDUFC2O95298 119 aa4.02□□□□□ -1.77
PTPN3-205ENST00000447271 GIG44P09565 113 aaPredicted RBP4.02□□□□□ -1.77
PTPN3-205ENST00000447271 RPL28P46779 137 aaKnown RBP4.02□□□□□ -1.77
PTPN3-205ENST00000447271 GAGE2BQ13066 116 aa4.02□□□□□ -1.77
PTPN3-205ENST00000447271 GAGE2EQ4V326 116 aa4.02□□□□□ -1.77
PTPN3-205ENST00000447271 TTC32Q5I0X7 151 aa4.02□□□□□ -1.77
PTPN3-205ENST00000447271 IMUPQ9GZP8 106 aa4.02□□□□□ -1.77
PTPN3-205ENST00000447271 GAGE2DQ9UEU5 116 aa4.02□□□□□ -1.77
PTPN3-205ENST00000447271 PRO0461Q9UI25 63 aa4.02□□□□□ -1.77
PTPN3-205ENST00000447271 PLAC8L1A1L4L8 177 aa4.01□□□□□ -1.77
PTPN3-205ENST00000447271 JMJD7-PLA2G4BH0Y9G9 81 aa4.01□□□□□ -1.77
PTPN3-205ENST00000447271 TMEM256-PLSCR3K7ERE1 68 aa4.01□□□□□ -1.77
PTPN3-205ENST00000447271 TRIAP1O43715 76 aa4.01□□□□□ -1.77
PTPN3-205ENST00000447271 ANGP03950 147 aaKnown RBP4.01□□□□□ -1.77
PTPN3-205ENST00000447271 PRM2P04554 102 aa4.01□□□□□ -1.77
PTPN3-205ENST00000447271 PDE6GP18545 87 aa4.01□□□□□ -1.77
PTPN3-205ENST00000447271 COX6A2Q02221 97 aa4.01□□□□□ -1.77
PTPN3-205ENST00000447271 RNASE13Q5GAN3 156 aaKnown RBP4.01□□□□□ -1.77
PTPN3-205ENST00000447271 ADAMTSL4-AS1Q5T5F5 129 aa4.01□□□□□ -1.77
PTPN3-205ENST00000447271 OR13C6PQ8NH95 151 aa4.01□□□□□ -1.77
PTPN3-205ENST00000447271 LITAFQ99732 161 aa4.01□□□□□ -1.77
PTPN3-205ENST00000447271 KLK5Q9Y337 293 aaPredicted RBP4.01□□□□□ -1.77
PTPN3-205ENST00000447271 IGHV4-28A0A0C4DH34 117 aa4□□□□□ -1.77
PTPN3-205ENST00000447271 IGKV3OR2-268A0A0C4DH90 116 aa4□□□□□ -1.77
PTPN3-205ENST00000447271 BAALC-AS2P0C853 105 aa4□□□□□ -1.77
PTPN3-205ENST00000447271 LINC00694P0DN24 101 aa4□□□□□ -1.77
PTPN3-205ENST00000447271 REG3AQ06141 175 aa4□□□□□ -1.77
PTPN3-205ENST00000447271 Q6Q795 121 aa4□□□□□ -1.77
PTPN3-205ENST00000447271 MIR7-3HGQ8N6C7 128 aa4□□□□□ -1.77
PTPN3-205ENST00000447271 FAT3Q8TDW7 4589 aa4□□□□□ -1.77
PTPN3-205ENST00000447271 XCL1P47992 114 aa3.99□□□□□ -1.77
PTPN3-205ENST00000447271 FAM104AQ969W3 186 aa3.99□□□□□ -1.77
PTPN3-205ENST00000447271 RMI2Q96E14 147 aa3.99□□□□□ -1.77
PTPN3-205ENST00000447271 LRP1Q07954 4544 aaKnown RBP3.98□□□□□ -1.77
PTPN3-205ENST00000447271 DEFB135Q30KP9 77 aa3.98□□□□□ -1.77
PTPN3-205ENST00000447271 C5orf38Q86SI9 138 aa3.98□□□□□ -1.77
PTPN3-205ENST00000447271 LINC00269Q8N2A0 174 aa3.98□□□□□ -1.77
PTPN3-205ENST00000447271 DAND5Q8N907 189 aa3.98□□□□□ -1.77
PTPN3-205ENST00000447271 NTN5Q8WTR8 489 aaPredicted RBP3.98□□□□□ -1.77
PTPN3-205ENST00000447271 CHCHD10Q8WYQ3 142 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms