RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 KIAA0087Q14695 138 aa4.92□□□□□ -1.62
SF3A3P1-201ENST00000446317 DYNC1H1Q14204 4646 aaKnown RBP4.91□□□□□ -1.62
SF3A3P1-201ENST00000446317 GVQW2A0A096LPI5 108 aaPredicted RBP4.91□□□□□ -1.62
SF3A3P1-201ENST00000446317 PFN2P35080 140 aa4.91□□□□□ -1.62
SF3A3P1-201ENST00000446317 HERVK_113P61574 105 aa4.91□□□□□ -1.62
SF3A3P1-201ENST00000446317 EPPK1P58107 5090 aaKnown RBP4.9□□□□□ -1.62
SF3A3P1-201ENST00000446317 IGKV2-24A0A0C4DH68 120 aa4.9□□□□□ -1.62
SF3A3P1-201ENST00000446317 H3BUT2 72 aa4.9□□□□□ -1.62
SF3A3P1-201ENST00000446317 LEPROTO15243 131 aa4.9□□□□□ -1.62
SF3A3P1-201ENST00000446317 CHTF8P0CG12 524 aa4.9□□□□□ -1.62
SF3A3P1-201ENST00000446317 IFITM1P13164 125 aa4.9□□□□□ -1.62
SF3A3P1-201ENST00000446317 LGALS3P17931 250 aaKnown RBP4.9□□□□□ -1.62
SF3A3P1-201ENST00000446317 NDUFV3P56181 108 aaKnown RBP4.9□□□□□ -1.62
SF3A3P1-201ENST00000446317 NPC2P61916 151 aa4.9□□□□□ -1.62
SF3A3P1-201ENST00000446317 SYCNQ0VAF6 134 aa4.9□□□□□ -1.62
SF3A3P1-201ENST00000446317 PCP2Q8IVA1 136 aa4.9□□□□□ -1.62
SF3A3P1-201ENST00000446317 CARD19Q96LW7 228 aa4.9□□□□□ -1.62
SF3A3P1-201ENST00000446317 C6orf48Q9UBA6 75 aa4.9□□□□□ -1.62
SF3A3P1-201ENST00000446317 IGLV5-39A0A0G2JS06 123 aa4.89□□□□□ -1.63
SF3A3P1-201ENST00000446317 J3QQQ9 107 aa4.89□□□□□ -1.63
SF3A3P1-201ENST00000446317 COX8AP10176 69 aa4.89□□□□□ -1.63
SF3A3P1-201ENST00000446317 RPL18AQ02543 176 aaKnown RBP4.89□□□□□ -1.63
SF3A3P1-201ENST00000446317 GAGE2BQ13066 116 aa4.89□□□□□ -1.63
SF3A3P1-201ENST00000446317 GAGE2EQ4V326 116 aa4.89□□□□□ -1.63
SF3A3P1-201ENST00000446317 DAND5Q8N907 189 aa4.89□□□□□ -1.63
SF3A3P1-201ENST00000446317 PLEKHB2Q96CS7 222 aa4.89□□□□□ -1.63
SF3A3P1-201ENST00000446317 GAGE2DQ9UEU5 116 aa4.89□□□□□ -1.63
SF3A3P1-201ENST00000446317 HECTD4Q9Y4D8 3996 aa4.89□□□□□ -1.63
SF3A3P1-201ENST00000446317 A0A1B0GVY2 172 aa4.88□□□□□ -1.63
SF3A3P1-201ENST00000446317 E9PLD3 99 aa4.88□□□□□ -1.63
SF3A3P1-201ENST00000446317 H3BMG7 143 aa4.88□□□□□ -1.63
SF3A3P1-201ENST00000446317 PANO1I0J062 215 aa4.88□□□□□ -1.63
SF3A3P1-201ENST00000446317 NDUFA1O15239 70 aa4.88□□□□□ -1.63
SF3A3P1-201ENST00000446317 GCSHP23434 173 aa4.88□□□□□ -1.63
SF3A3P1-201ENST00000446317 KRTAP10-1P60331 282 aa4.88□□□□□ -1.63
SF3A3P1-201ENST00000446317 MEIG1Q5JSS6 88 aa4.88□□□□□ -1.63
SF3A3P1-201ENST00000446317 LINC00336Q6ZUF6 198 aa4.88□□□□□ -1.63
SF3A3P1-201ENST00000446317 Q8IZM0 81 aa4.88□□□□□ -1.63
SF3A3P1-201ENST00000446317 NDUFA12Q9UI09 145 aa4.88□□□□□ -1.63
SF3A3P1-201ENST00000446317 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
SF3A3P1-201ENST00000446317 ZNF815PA8K554 130 aa4.88□□□□□ -1.63
SF3A3P1-201ENST00000446317 C16orf90A8MZG2 172 aa4.88□□□□□ -1.63
SF3A3P1-201ENST00000446317 SMIM13P0DJ93 91 aa4.88□□□□□ -1.63
SF3A3P1-201ENST00000446317 C14orf177Q52M58 125 aa4.88□□□□□ -1.63
SF3A3P1-201ENST00000446317 KRTAP4-6Q9BYQ5 205 aa4.88□□□□□ -1.63
SF3A3P1-201ENST00000446317 LINC00158P58513 81 aa4.87□□□□□ -1.63
SF3A3P1-201ENST00000446317 LINC01561Q8N1V8 128 aa4.87□□□□□ -1.63
SF3A3P1-201ENST00000446317 DPH3Q96FX2 82 aa4.87□□□□□ -1.63
SF3A3P1-201ENST00000446317 XAGE1AQ9HD64 81 aa4.87□□□□□ -1.63
SF3A3P1-201ENST00000446317 A0A096LNI7 61 aa4.86□□□□□ -1.63
SF3A3P1-201ENST00000446317 FAM168BA1KXE4 195 aa4.86□□□□□ -1.63
SF3A3P1-201ENST00000446317 C2orf48Q96LS8 159 aa4.86□□□□□ -1.63
SF3A3P1-201ENST00000446317 FAM30AQ9NZY2 134 aa4.86□□□□□ -1.63
SF3A3P1-201ENST00000446317 PRO0628Q9UI54 55 aa4.86□□□□□ -1.63
SF3A3P1-201ENST00000446317 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.86□□□□□ -1.63
SF3A3P1-201ENST00000446317 PKHD1P08F94 4074 aa4.85□□□□□ -1.63
SF3A3P1-201ENST00000446317 DNAH8Q96JB1 4490 aa4.85□□□□□ -1.63
SF3A3P1-201ENST00000446317 LRP1BQ9NZR2 4599 aa4.85□□□□□ -1.63
SF3A3P1-201ENST00000446317 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.85□□□□□ -1.63
SF3A3P1-201ENST00000446317 A0A0J9YXY3 114 aa4.85□□□□□ -1.63
SF3A3P1-201ENST00000446317 MYMXA0A1B0GTQ4 84 aa4.85□□□□□ -1.63
SF3A3P1-201ENST00000446317 C9JAW5 83 aa4.85□□□□□ -1.63
SF3A3P1-201ENST00000446317 MT-ATP8P03928 68 aa4.85□□□□□ -1.63
SF3A3P1-201ENST00000446317 Q6ZRP5 223 aa4.85□□□□□ -1.63
SF3A3P1-201ENST00000446317 FAM19A5Q7Z5A7 132 aaPredicted RBP4.85□□□□□ -1.63
SF3A3P1-201ENST00000446317 V9GYY9 64 aa4.85□□□□□ -1.63
SF3A3P1-201ENST00000446317 SNCGO76070 127 aa4.84□□□□□ -1.63
SF3A3P1-201ENST00000446317 XGP55808 180 aa4.84□□□□□ -1.63
SF3A3P1-201ENST00000446317 CNBPP62633 177 aaKnown RBP4.84□□□□□ -1.63
SF3A3P1-201ENST00000446317 ADAMTSL4-AS1Q5T5F5 129 aa4.84□□□□□ -1.63
SF3A3P1-201ENST00000446317 SCGB1D4Q6XE38 83 aa4.84□□□□□ -1.63
SF3A3P1-201ENST00000446317 C2orf91Q6ZV80 131 aa4.84□□□□□ -1.63
SF3A3P1-201ENST00000446317 C9orf163Q8N9P6 203 aa4.84□□□□□ -1.63
SF3A3P1-201ENST00000446317 PPDPFLQ8WWR9 84 aa4.84□□□□□ -1.63
SF3A3P1-201ENST00000446317 CCDC179H3BU77 68 aa4.83□□□□□ -1.64
SF3A3P1-201ENST00000446317 PRR3P79522 188 aaKnown RBP4.83□□□□□ -1.64
SF3A3P1-201ENST00000446317 ETDBQ3ZM63 59 aa4.83□□□□□ -1.64
SF3A3P1-201ENST00000446317 LYRM7Q5U5X0 104 aa4.83□□□□□ -1.64
SF3A3P1-201ENST00000446317 SDIM1Q6ZPB5 146 aa4.83□□□□□ -1.64
SF3A3P1-201ENST00000446317 MIR7-3HGQ8N6C7 128 aa4.83□□□□□ -1.64
SF3A3P1-201ENST00000446317 HIGD1BQ9P298 99 aa4.83□□□□□ -1.64
SF3A3P1-201ENST00000446317 LOC107984640A0A0U1RRK4 108 aa4.82□□□□□ -1.64
SF3A3P1-201ENST00000446317 A0A1W2PNN7 141 aa4.82□□□□□ -1.64
SF3A3P1-201ENST00000446317 CXCL5P42830 114 aa4.82□□□□□ -1.64
SF3A3P1-201ENST00000446317 C9orf129Q5T035 196 aaKnown RBP4.82□□□□□ -1.64
SF3A3P1-201ENST00000446317 Q8NDZ9 215 aa4.82□□□□□ -1.64
SF3A3P1-201ENST00000446317 PLA2G2DQ9UNK4 145 aa4.82□□□□□ -1.64
SF3A3P1-201ENST00000446317 APOBP04114 4563 aaKnown RBP4.82□□□□□ -1.64
SF3A3P1-201ENST00000446317 TRBV30A0A0K0K1B3 111 aa4.81□□□□□ -1.64
SF3A3P1-201ENST00000446317 NDUFC2-KCTD14E9PQ53 114 aa4.81□□□□□ -1.64
SF3A3P1-201ENST00000446317 NCR3O14931 201 aa4.81□□□□□ -1.64
SF3A3P1-201ENST00000446317 TAL2Q16559 108 aa4.81□□□□□ -1.64
SF3A3P1-201ENST00000446317 SERTAD4-AS1Q5TG53 156 aa4.81□□□□□ -1.64
SF3A3P1-201ENST00000446317 RAB37Q96AX2 223 aa4.81□□□□□ -1.64
SF3A3P1-201ENST00000446317 SND1-IT1Q9HBX3 110 aa4.81□□□□□ -1.64
SF3A3P1-201ENST00000446317 PRO0461Q9UI25 63 aa4.81□□□□□ -1.64
SF3A3P1-201ENST00000446317 SMR3BP02814 79 aaPredicted RBP4.81□□□□□ -1.64
SF3A3P1-201ENST00000446317 SOSTDC1Q6X4U4 206 aa4.81□□□□□ -1.64
SF3A3P1-201ENST00000446317 IMUPQ9GZP8 106 aa4.81□□□□□ -1.64
SF3A3P1-201ENST00000446317 A0A1B0GWB2 263 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms