RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 HCG22E2RYF7 251 aa5.54□□□□□ -1.52
SMG1-202ENST00000446231 DEFB135Q30KP9 77 aa5.54□□□□□ -1.52
SMG1-202ENST00000446231 C1orf137Q5JT78 98 aa5.54□□□□□ -1.52
SMG1-202ENST00000446231 IGHV3OR16-9A0A0B4J2B5 98 aa5.54□□□□□ -1.52
SMG1-202ENST00000446231 RAI1Q7Z5J4 1906 aaPredicted RBP5.54□□□□□ -1.52
SMG1-202ENST00000446231 LINC00208Q96KT6 92 aa5.53□□□□□ -1.52
SMG1-202ENST00000446231 Q96MF0 132 aa5.53□□□□□ -1.52
SMG1-202ENST00000446231 B9D2Q9BPU9 175 aa5.53□□□□□ -1.52
SMG1-202ENST00000446231 C1orf64Q8NEQ6 169 aa5.53□□□□□ -1.52
SMG1-202ENST00000446231 Q9UF83 564 aa5.52□□□□□ -1.53
SMG1-202ENST00000446231 A0A1B0GUV1 79 aa5.52□□□□□ -1.53
SMG1-202ENST00000446231 LELP1Q5T871 98 aa5.52□□□□□ -1.53
SMG1-202ENST00000446231 IL17DQ8TAD2 202 aa5.52□□□□□ -1.53
SMG1-202ENST00000446231 C6orf223Q8N319 242 aa5.52□□□□□ -1.53
SMG1-202ENST00000446231 hDV103S1A0JD37 113 aa5.52□□□□□ -1.53
SMG1-202ENST00000446231 C18orf65Q6ZTR6 163 aa5.52□□□□□ -1.53
SMG1-202ENST00000446231 Q5XG85 94 aa5.51□□□□□ -1.53
SMG1-202ENST00000446231 EGFEM1PQ0D2K5 195 aa5.51□□□□□ -1.53
SMG1-202ENST00000446231 ZNF702PQ9H963 129 aa5.51□□□□□ -1.53
SMG1-202ENST00000446231 PCSK5Q92824 1860 aa5.5□□□□□ -1.53
SMG1-202ENST00000446231 DNAJC9-AS1A6NH13 148 aa5.5□□□□□ -1.53
SMG1-202ENST00000446231 RPL37AP8A6NKH3 93 aa5.5□□□□□ -1.53
SMG1-202ENST00000446231 LINC01006Q8NI28 216 aa5.5□□□□□ -1.53
SMG1-202ENST00000446231 KLK9Q2XQG4 91 aa5.49□□□□□ -1.53
SMG1-202ENST00000446231 ZNF575Q86XF7 245 aa5.49□□□□□ -1.53
SMG1-202ENST00000446231 CD164Q04900 197 aa5.49□□□□□ -1.53
SMG1-202ENST00000446231 LRBAP50851 2863 aa5.49□□□□□ -1.53
SMG1-202ENST00000446231 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.49□□□□□ -1.53
SMG1-202ENST00000446231 KLKP1Q107X0 134 aa5.49□□□□□ -1.53
SMG1-202ENST00000446231 CHD9Q3L8U1 2897 aa5.48□□□□□ -1.53
SMG1-202ENST00000446231 LY6G6DO95868 133 aa5.48□□□□□ -1.53
SMG1-202ENST00000446231 SERTAD4-AS1Q5TG53 156 aa5.48□□□□□ -1.53
SMG1-202ENST00000446231 H0Y9P7 68 aa5.48□□□□□ -1.53
SMG1-202ENST00000446231 DEFB116Q30KQ4 102 aa5.48□□□□□ -1.53
SMG1-202ENST00000446231 ODF3L2Q3SX64 289 aa5.48□□□□□ -1.53
SMG1-202ENST00000446231 KIAA0087Q14695 138 aa5.47□□□□□ -1.53
SMG1-202ENST00000446231 TRAV22A0A0B4J277 110 aa5.47□□□□□ -1.53
SMG1-202ENST00000446231 VPREB1P12018 145 aa5.47□□□□□ -1.53
SMG1-202ENST00000446231 PRR15Q8IV56 129 aa5.46□□□□□ -1.54
SMG1-202ENST00000446231 SMIM29Q86T20 159 aa5.46□□□□□ -1.54
SMG1-202ENST00000446231 HIVEP1P15822 2718 aa5.46□□□□□ -1.54
SMG1-202ENST00000446231 CYSTM1Q9H1C7 97 aa5.46□□□□□ -1.54
SMG1-202ENST00000446231 PCOTHQ58A44 107 aa5.46□□□□□ -1.54
SMG1-202ENST00000446231 ATP11AUNQ6ZP68 121 aa5.46□□□□□ -1.54
SMG1-202ENST00000446231 A0A096LNI7 61 aa5.46□□□□□ -1.54
SMG1-202ENST00000446231 C9orf66Q5T8R8 295 aa5.45□□□□□ -1.54
SMG1-202ENST00000446231 APCP25054 2843 aa5.45□□□□□ -1.54
SMG1-202ENST00000446231 IGHV4-30-4P0DP06 118 aa5.45□□□□□ -1.54
SMG1-202ENST00000446231 IGHV4-31P0DP07 118 aa5.45□□□□□ -1.54
SMG1-202ENST00000446231 SPAG11AQ6PDA7 123 aa5.44□□□□□ -1.54
SMG1-202ENST00000446231 LAMA2P24043 3122 aaKnown RBP5.44□□□□□ -1.54
SMG1-202ENST00000446231 C9orf129Q5T035 196 aaKnown RBP5.44□□□□□ -1.54
SMG1-202ENST00000446231 IGLV6-57P01721 117 aa5.44□□□□□ -1.54
SMG1-202ENST00000446231 A0A1B0GW54 56 aa5.44□□□□□ -1.54
SMG1-202ENST00000446231 K7ERS5 55 aa5.44□□□□□ -1.54
SMG1-202ENST00000446231 A8MUN3 132 aa5.43□□□□□ -1.54
SMG1-202ENST00000446231 C14orf177Q52M58 125 aa5.43□□□□□ -1.54
SMG1-202ENST00000446231 IGKV2-24A0A0C4DH68 120 aa5.43□□□□□ -1.54
SMG1-202ENST00000446231 CDSNQ15517 529 aa5.43□□□□□ -1.54
SMG1-202ENST00000446231 CYP4F30PQ9H0H9 118 aa5.43□□□□□ -1.54
SMG1-202ENST00000446231 C19orf84I3L1E1 186 aa5.42□□□□□ -1.54
SMG1-202ENST00000446231 LYPD5Q6UWN5 251 aa5.42□□□□□ -1.54
SMG1-202ENST00000446231 C7orf65Q6ZTY9 151 aa5.42□□□□□ -1.54
SMG1-202ENST00000446231 DEFB113Q30KQ7 82 aa5.42□□□□□ -1.54
SMG1-202ENST00000446231 PLA2G2AP14555 144 aa5.41□□□□□ -1.54
SMG1-202ENST00000446231 Q9BRP9 147 aa5.41□□□□□ -1.54
SMG1-202ENST00000446231 ASH1LQ9NR48 2969 aaKnown RBP5.41□□□□□ -1.54
SMG1-202ENST00000446231 H3BPC8 53 aa5.41□□□□□ -1.54
SMG1-202ENST00000446231 AVPP01185 164 aa5.41□□□□□ -1.54
SMG1-202ENST00000446231 ELOF1P60002 83 aaKnown RBP5.41□□□□□ -1.54
SMG1-202ENST00000446231 Q1T7F1 81 aa5.4□□□□□ -1.54
SMG1-202ENST00000446231 LINC00167Q96N53 147 aa5.4□□□□□ -1.55
SMG1-202ENST00000446231 Q8NBF4 154 aa5.4□□□□□ -1.55
SMG1-202ENST00000446231 C6orf48Q9UBA6 75 aa5.4□□□□□ -1.55
SMG1-202ENST00000446231 FP248Q71RG6 208 aaPredicted RBP5.4□□□□□ -1.55
SMG1-202ENST00000446231 REG3GQ6UW15 175 aa5.39□□□□□ -1.55
SMG1-202ENST00000446231 KTN1-AS1Q86SY8 53 aa5.39□□□□□ -1.55
SMG1-202ENST00000446231 A0A087WSZ3 146 aa5.39□□□□□ -1.55
SMG1-202ENST00000446231 C11orf45Q8TAV5 145 aa5.39□□□□□ -1.55
SMG1-202ENST00000446231 PRUNE2Q8WUY3 3088 aa5.39□□□□□ -1.55
SMG1-202ENST00000446231 OXTP01178 125 aa5.39□□□□□ -1.55
SMG1-202ENST00000446231 ITPR2Q14571 2701 aa5.39□□□□□ -1.55
SMG1-202ENST00000446231 C7orf33Q8WU49 177 aa5.39□□□□□ -1.55
SMG1-202ENST00000446231 TP53AIP1Q9HCN2 124 aa5.39□□□□□ -1.55
SMG1-202ENST00000446231 MGAQ8IWI9 3026 aa5.38□□□□□ -1.55
SMG1-202ENST00000446231 C8orf87E5RJ46 101 aa5.38□□□□□ -1.55
SMG1-202ENST00000446231 TENM3Q9P273 2699 aa5.37□□□□□ -1.55
SMG1-202ENST00000446231 IGHV6-1A0A0B4J1U7 121 aa5.37□□□□□ -1.55
SMG1-202ENST00000446231 KMT2BQ9UMN6 2715 aaPredicted RBP5.37□□□□□ -1.55
SMG1-202ENST00000446231 LOC101927531A0A1B0GV80 90 aa5.36□□□□□ -1.55
SMG1-202ENST00000446231 FRYQ5TBA9 3013 aa5.36□□□□□ -1.55
SMG1-202ENST00000446231 A0A1W2PPR1 153 aa5.36□□□□□ -1.55
SMG1-202ENST00000446231 COL27A1Q8IZC6 1860 aaPredicted RBP5.35□□□□□ -1.55
SMG1-202ENST00000446231 TRBV7-4A0A0J9YYF1 115 aa5.35□□□□□ -1.55
SMG1-202ENST00000446231 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.35□□□□□ -1.55
SMG1-202ENST00000446231 FSHBP01225 129 aa5.35□□□□□ -1.55
SMG1-202ENST00000446231 GVQW2A0A096LPI5 108 aaPredicted RBP5.34□□□□□ -1.55
SMG1-202ENST00000446231 CHD7Q9P2D1 2997 aa5.34□□□□□ -1.56
SMG1-202ENST00000446231 COA5Q86WW8 74 aa5.33□□□□□ -1.56
SMG1-202ENST00000446231 FAM104AQ969W3 186 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms