RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 TMEM141Q96I45 108 aa1.74□□□□□ -2.13
HMGB1P48-201ENST00000446155 MRPL57Q9BQC6 102 aaKnown RBP1.74□□□□□ -2.13
HMGB1P48-201ENST00000446155 DYNC1H1Q14204 4646 aaKnown RBP1.74□□□□□ -2.13
HMGB1P48-201ENST00000446155 WNK2Q9Y3S1 2297 aa1.74□□□□□ -2.13
HMGB1P48-201ENST00000446155 HUWE1Q7Z6Z7 4374 aaKnown RBP1.74□□□□□ -2.13
HMGB1P48-201ENST00000446155 STARD9Q9P2P6 4700 aa1.73□□□□□ -2.13
HMGB1P48-201ENST00000446155 SORL1Q92673 2214 aa1.73□□□□□ -2.13
HMGB1P48-201ENST00000446155 TPPP2P59282 170 aa1.73□□□□□ -2.13
HMGB1P48-201ENST00000446155 Q6AWC8 147 aa1.73□□□□□ -2.13
HMGB1P48-201ENST00000446155 LCN9Q8WX39 176 aa1.73□□□□□ -2.13
HMGB1P48-201ENST00000446155 C14orf144Q96I85 54 aa1.73□□□□□ -2.13
HMGB1P48-201ENST00000446155 DNAH11Q96DT5 4516 aa1.73□□□□□ -2.13
HMGB1P48-201ENST00000446155 KRTAP5-8O75690 187 aa1.72□□□□□ -2.13
HMGB1P48-201ENST00000446155 CCKP06307 115 aa1.72□□□□□ -2.13
HMGB1P48-201ENST00000446155 SPINT3P49223 89 aa1.72□□□□□ -2.13
HMGB1P48-201ENST00000446155 FXYD4P59646 89 aa1.72□□□□□ -2.13
HMGB1P48-201ENST00000446155 RPL37AP61513 92 aaKnown RBP1.72□□□□□ -2.13
HMGB1P48-201ENST00000446155 PPP3R1P63098 170 aa1.72□□□□□ -2.13
HMGB1P48-201ENST00000446155 RPL7L1Q6DKI1 246 aaKnown RBP1.72□□□□□ -2.13
HMGB1P48-201ENST00000446155 SLC48A1Q6P1K1 146 aa1.72□□□□□ -2.13
HMGB1P48-201ENST00000446155 NDUFA11Q86Y39 141 aa1.72□□□□□ -2.13
HMGB1P48-201ENST00000446155 MRPL35Q9NZE8 188 aaKnown RBP1.72□□□□□ -2.13
HMGB1P48-201ENST00000446155 HSPG2P98160 4391 aa1.72□□□□□ -2.13
HMGB1P48-201ENST00000446155 KMT2AQ03164 3969 aa1.72□□□□□ -2.13
HMGB1P48-201ENST00000446155 PKHD1P08F94 4074 aa1.71□□□□□ -2.13
HMGB1P48-201ENST00000446155 A6NIN4 97 aa1.71□□□□□ -2.14
HMGB1P48-201ENST00000446155 HIGD1CA8MV81 97 aa1.71□□□□□ -2.14
HMGB1P48-201ENST00000446155 K7EIL1 84 aa1.71□□□□□ -2.14
HMGB1P48-201ENST00000446155 APOC4-APOC2K7ER74 178 aa1.71□□□□□ -2.14
HMGB1P48-201ENST00000446155 APOC2P02655 101 aa1.71□□□□□ -2.14
HMGB1P48-201ENST00000446155 UBE2G1P62253 170 aa1.71□□□□□ -2.14
HMGB1P48-201ENST00000446155 C9orf116Q5BN46 136 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P48-201ENST00000446155 DEFB121Q5J5C9 76 aa1.71□□□□□ -2.14
HMGB1P48-201ENST00000446155 MRPL54Q6P161 138 aaKnown RBP1.71□□□□□ -2.14
HMGB1P48-201ENST00000446155 SBSPONQ8IVN8 264 aa1.71□□□□□ -2.14
HMGB1P48-201ENST00000446155 IFI27L1Q96BM0 104 aa1.71□□□□□ -2.14
HMGB1P48-201ENST00000446155 IER3IP1Q9Y5U9 82 aa1.71□□□□□ -2.14
HMGB1P48-201ENST00000446155 ALMS1Q8TCU4 4167 aa1.71□□□□□ -2.14
HMGB1P48-201ENST00000446155 RNF213Q63HN8 5207 aa1.7□□□□□ -2.14
HMGB1P48-201ENST00000446155 ANKRD36A6QL64 1941 aa1.7□□□□□ -2.14
HMGB1P48-201ENST00000446155 IGKV2-29A2NJV5 120 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P48-201ENST00000446155 EFNA4P52798 201 aa1.7□□□□□ -2.14
HMGB1P48-201ENST00000446155 CATR1Q13166 79 aa1.7□□□□□ -2.14
HMGB1P48-201ENST00000446155 S100A7L2Q5SY68 101 aa1.7□□□□□ -2.14
HMGB1P48-201ENST00000446155 TSKUQ8WUA8 353 aa1.7□□□□□ -2.14
HMGB1P48-201ENST00000446155 DNAH17Q9UFH2 4485 aa1.7□□□□□ -2.14
HMGB1P48-201ENST00000446155 VPS13DQ5THJ4 4388 aa1.7□□□□□ -2.14
HMGB1P48-201ENST00000446155 HMCN2Q8NDA2 5059 aa1.69□□□□□ -2.14
HMGB1P48-201ENST00000446155 CBLN1P23435 193 aa1.69□□□□□ -2.14
HMGB1P48-201ENST00000446155 RBP2P50120 134 aa1.69□□□□□ -2.14
HMGB1P48-201ENST00000446155 NCMAPQ5T1S8 102 aa1.69□□□□□ -2.14
HMGB1P48-201ENST00000446155 C12orf73Q69YU5 71 aa1.69□□□□□ -2.14
HMGB1P48-201ENST00000446155 PPP3R2Q96LZ3 170 aa1.69□□□□□ -2.14
HMGB1P48-201ENST00000446155 SPANXDQ9BXN6 97 aa1.69□□□□□ -2.14
HMGB1P48-201ENST00000446155 RPRMQ9NS64 109 aa1.69□□□□□ -2.14
HMGB1P48-201ENST00000446155 FAIMQ9NVQ4 179 aa1.69□□□□□ -2.14
HMGB1P48-201ENST00000446155 FAT2Q9NYQ8 4349 aa1.68□□□□□ -2.14
HMGB1P48-201ENST00000446155 MYCBP2O75592 4640 aa1.68□□□□□ -2.14
HMGB1P48-201ENST00000446155 APOBP04114 4563 aaKnown RBP1.68□□□□□ -2.14
HMGB1P48-201ENST00000446155 LOC101927531A0A1B0GV80 90 aa1.68□□□□□ -2.14
HMGB1P48-201ENST00000446155 TCRBV3S1A0A5B6 114 aa1.68□□□□□ -2.14
HMGB1P48-201ENST00000446155 CLPSL1A2RUU4 121 aa1.68□□□□□ -2.14
HMGB1P48-201ENST00000446155 H0YGG7 62 aa1.68□□□□□ -2.14
HMGB1P48-201ENST00000446155 SMIM6P0DI80 62 aa1.68□□□□□ -2.14
HMGB1P48-201ENST00000446155 Q8N8P6 123 aa1.68□□□□□ -2.14
HMGB1P48-201ENST00000446155 TSLPQ969D9 159 aa1.68□□□□□ -2.14
HMGB1P48-201ENST00000446155 BPESC1Q9GZL8 116 aa1.68□□□□□ -2.14
HMGB1P48-201ENST00000446155 PROK2Q9HC23 129 aa1.68□□□□□ -2.14
HMGB1P48-201ENST00000446155 DNAH2Q9P225 4427 aa1.68□□□□□ -2.14
HMGB1P48-201ENST00000446155 TRAV12-3A0A0B4J271 114 aa1.67□□□□□ -2.14
HMGB1P48-201ENST00000446155 PVALEFA0A1B0GWK0 134 aa1.67□□□□□ -2.14
HMGB1P48-201ENST00000446155 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
HMGB1P48-201ENST00000446155 C9orf153Q5TBE3 101 aa1.67□□□□□ -2.14
HMGB1P48-201ENST00000446155 GTF2H5Q6ZYL4 71 aa1.67□□□□□ -2.14
HMGB1P48-201ENST00000446155 PKD1P98161 4303 aa1.67□□□□□ -2.14
HMGB1P48-201ENST00000446155 PIGBOS1A0A0B4J2F0 54 aa1.66□□□□□ -2.14
HMGB1P48-201ENST00000446155 OOSP1A8MZH6 123 aa1.66□□□□□ -2.14
HMGB1P48-201ENST00000446155 NPC2P61916 151 aa1.66□□□□□ -2.14
HMGB1P48-201ENST00000446155 XAF1Q6GPH4 301 aa1.66□□□□□ -2.14
HMGB1P48-201ENST00000446155 SPTSSBQ8NFR3 76 aa1.66□□□□□ -2.14
HMGB1P48-201ENST00000446155 AMELYQ99218 206 aa1.66□□□□□ -2.14
HMGB1P48-201ENST00000446155 COA4Q9NYJ1 87 aa1.66□□□□□ -2.14
HMGB1P48-201ENST00000446155 FLG2Q5D862 2391 aaPredicted RBP1.65□□□□□ -2.14
HMGB1P48-201ENST00000446155 NBDYA0A0U1RRE5 68 aa1.65□□□□□ -2.15
HMGB1P48-201ENST00000446155 TEX49A0A1B0GTD5 131 aa1.65□□□□□ -2.15
HMGB1P48-201ENST00000446155 IFNA17P01571 189 aa1.65□□□□□ -2.15
HMGB1P48-201ENST00000446155 RBM3P98179 157 aaKnown RBP1.65□□□□□ -2.15
HMGB1P48-201ENST00000446155 INSL4Q14641 139 aa1.65□□□□□ -2.15
HMGB1P48-201ENST00000446155 FXYD3Q14802 87 aa1.65□□□□□ -2.15
HMGB1P48-201ENST00000446155 WFDC9Q8NEX5 89 aa1.65□□□□□ -2.15
HMGB1P48-201ENST00000446155 C10orf82Q8WW14 230 aa1.65□□□□□ -2.15
HMGB1P48-201ENST00000446155 FAT1Q14517 4588 aa1.65□□□□□ -2.15
HMGB1P48-201ENST00000446155 LRP1BQ9NZR2 4599 aa1.65□□□□□ -2.15
HMGB1P48-201ENST00000446155 MUC2Q02817 5179 aa1.65□□□□□ -2.15
HMGB1P48-201ENST00000446155 DNAH5Q8TE73 4624 aa1.64□□□□□ -2.15
HMGB1P48-201ENST00000446155 NCR3O14931 201 aa1.64□□□□□ -2.15
HMGB1P48-201ENST00000446155 HSD52Q0P140 79 aa1.64□□□□□ -2.15
HMGB1P48-201ENST00000446155 CYP2G1PQ6ZSU1 146 aa1.64□□□□□ -2.15
HMGB1P48-201ENST00000446155 C8orf59Q8N0T1 100 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P48-201ENST00000446155 SVBPQ8N300 66 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms