RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 Q8IZM0 81 aa11.42□□□□□ -0.58
LAPTM4B-201ENST00000445593 UQCRQO14949 82 aa11.42□□□□□ -0.58
LAPTM4B-201ENST00000445593 UNQ6190/PRO20217Q6UXQ8 127 aa11.42□□□□□ -0.58
LAPTM4B-201ENST00000445593 FAM236DA0A1B0GTK5 79 aa11.41□□□□□ -0.58
LAPTM4B-201ENST00000445593 FAM236CP0DP71 79 aa11.41□□□□□ -0.58
LAPTM4B-201ENST00000445593 SPAG11BQ08648 103 aa11.41□□□□□ -0.58
LAPTM4B-201ENST00000445593 ENHOQ6UWT2 76 aa11.41□□□□□ -0.58
LAPTM4B-201ENST00000445593 LINC00336Q6ZUF6 198 aa11.41□□□□□ -0.58
LAPTM4B-201ENST00000445593 EGFEM1PQ0D2K5 195 aa11.4□□□□□ -0.58
LAPTM4B-201ENST00000445593 TRACP01848 142 aa11.4□□□□□ -0.58
LAPTM4B-201ENST00000445593 KIAA0087Q14695 138 aa11.4□□□□□ -0.58
LAPTM4B-201ENST00000445593 SMIM11BQ8TCY0 68 aa11.4□□□□□ -0.58
LAPTM4B-201ENST00000445593 DEFB131BA0A096LNP1 70 aa11.4□□□□□ -0.59
LAPTM4B-201ENST00000445593 HIGD2BQ4VC39 106 aa11.4□□□□□ -0.59
LAPTM4B-201ENST00000445593 C11orf45Q8TAV5 145 aa11.4□□□□□ -0.59
LAPTM4B-201ENST00000445593 TRAV13-2A0A0B4J235 113 aa11.39□□□□□ -0.59
LAPTM4B-201ENST00000445593 ESRGQ1W209 222 aa11.38□□□□□ -0.59
LAPTM4B-201ENST00000445593 DPH3Q96FX2 82 aa11.37□□□□□ -0.59
LAPTM4B-201ENST00000445593 NCR3O14931 201 aa11.37□□□□□ -0.59
LAPTM4B-201ENST00000445593 C2orf48Q96LS8 159 aa11.35□□□□□ -0.59
LAPTM4B-201ENST00000445593 A0A087WYN8 130 aa11.35□□□□□ -0.59
LAPTM4B-201ENST00000445593 Q8NDZ9 215 aa11.34□□□□□ -0.59
LAPTM4B-201ENST00000445593 XAGE1AQ9HD64 81 aa11.34□□□□□ -0.59
LAPTM4B-201ENST00000445593 SLPIP03973 132 aa11.33□□□□□ -0.6
LAPTM4B-201ENST00000445593 Q5XG85 94 aa11.33□□□□□ -0.6
LAPTM4B-201ENST00000445593 SMCR5Q8TEV8 140 aa11.33□□□□□ -0.6
LAPTM4B-201ENST00000445593 IGKV3D-7A0A0C4DH55 119 aa11.32□□□□□ -0.6
LAPTM4B-201ENST00000445593 A0A1B0GX51 115 aa11.32□□□□□ -0.6
LAPTM4B-201ENST00000445593 SDIM1Q6ZPB5 146 aa11.32□□□□□ -0.6
LAPTM4B-201ENST00000445593 A0A087WVE0 104 aa11.32□□□□□ -0.6
LAPTM4B-201ENST00000445593 F8WDY8 70 aa11.32□□□□□ -0.6
LAPTM4B-201ENST00000445593 COX7CP15954 63 aa11.32□□□□□ -0.6
LAPTM4B-201ENST00000445593 PRR34Q9NV39 138 aa11.32□□□□□ -0.6
LAPTM4B-201ENST00000445593 BAALC-AS2P0C853 105 aa11.31□□□□□ -0.6
LAPTM4B-201ENST00000445593 BRK1Q8WUW1 75 aa11.31□□□□□ -0.6
LAPTM4B-201ENST00000445593 IGKV2D-24A0A075B6R9 120 aa11.31□□□□□ -0.6
LAPTM4B-201ENST00000445593 LECT2O14960 151 aa11.31□□□□□ -0.6
LAPTM4B-201ENST00000445593 H3BT86 120 aa11.3□□□□□ -0.6
LAPTM4B-201ENST00000445593 RPL28P46779 137 aaKnown RBP11.3□□□□□ -0.6
LAPTM4B-201ENST00000445593 TENM2Q9NT68 2774 aa11.3□□□□□ -0.6
LAPTM4B-201ENST00000445593 DNAL4O96015 105 aa11.3□□□□□ -0.6
LAPTM4B-201ENST00000445593 V9GYY9 64 aa11.29□□□□□ -0.6
LAPTM4B-201ENST00000445593 K7EIL1 84 aa11.29□□□□□ -0.6
LAPTM4B-201ENST00000445593 CXCL5P42830 114 aa11.28□□□□□ -0.6
LAPTM4B-201ENST00000445593 ZNF561-AS1K7EIQ3 104 aa11.28□□□□□ -0.6
LAPTM4B-201ENST00000445593 RPL18AQ02543 176 aaKnown RBP11.27□□□□□ -0.61
LAPTM4B-201ENST00000445593 COL7A1Q02388 2944 aa11.27□□□□□ -0.61
LAPTM4B-201ENST00000445593 S100A7L2Q5SY68 101 aa11.26□□□□□ -0.61
LAPTM4B-201ENST00000445593 CAMK2N2Q96S95 79 aa11.26□□□□□ -0.61
LAPTM4B-201ENST00000445593 TRBV7-7A0A0K0K1E9 115 aa11.26□□□□□ -0.61
LAPTM4B-201ENST00000445593 C6orf48Q9UBA6 75 aa11.26□□□□□ -0.61
LAPTM4B-201ENST00000445593 DNAH3Q8TD57 4116 aa11.25□□□□□ -0.61
LAPTM4B-201ENST00000445593 LINC01561Q8N1V8 128 aa11.25□□□□□ -0.61
LAPTM4B-201ENST00000445593 C9orf129Q5T035 196 aaKnown RBP11.24□□□□□ -0.61
LAPTM4B-201ENST00000445593 PRO0628Q9UI54 55 aa11.24□□□□□ -0.61
LAPTM4B-201ENST00000445593 HUWE1Q7Z6Z7 4374 aaKnown RBP11.22□□□□□ -0.61
LAPTM4B-201ENST00000445593 C6orf99Q4VX62 202 aa11.22□□□□□ -0.61
LAPTM4B-201ENST00000445593 COX17Q14061 63 aa11.22□□□□□ -0.61
LAPTM4B-201ENST00000445593 Q6ZRU5 148 aa11.21□□□□□ -0.61
LAPTM4B-201ENST00000445593 LYSTQ99698 3801 aa11.21□□□□□ -0.62
LAPTM4B-201ENST00000445593 H3BNG1 76 aa11.21□□□□□ -0.62
LAPTM4B-201ENST00000445593 HIST1H4AP62805 103 aaKnown RBP11.21□□□□□ -0.62
LAPTM4B-201ENST00000445593 MDFIQ99750 246 aa11.21□□□□□ -0.62
LAPTM4B-201ENST00000445593 C1orf195Q5TG92 126 aa11.2□□□□□ -0.62
LAPTM4B-201ENST00000445593 C22orf24Q9Y442 160 aa11.2□□□□□ -0.62
LAPTM4B-201ENST00000445593 RPS28P62857 69 aaKnown RBP11.2□□□□□ -0.62
LAPTM4B-201ENST00000445593 C15orf56Q8N910 161 aa11.19□□□□□ -0.62
LAPTM4B-201ENST00000445593 CRYGAP11844 174 aa11.18□□□□□ -0.62
LAPTM4B-201ENST00000445593 C14orf132Q9NPU4 83 aa11.18□□□□□ -0.62
LAPTM4B-201ENST00000445593 LINC00588Q9Y4M8 146 aa11.18□□□□□ -0.62
LAPTM4B-201ENST00000445593 H0YGX0 51 aa11.18□□□□□ -0.62
LAPTM4B-201ENST00000445593 TRAV10A0A0B4J240 114 aa11.18□□□□□ -0.62
LAPTM4B-201ENST00000445593 CASC10Q5T4H9 136 aa11.17□□□□□ -0.62
LAPTM4B-201ENST00000445593 KRTAP26-1Q6PEX3 210 aa11.17□□□□□ -0.62
LAPTM4B-201ENST00000445593 TMEM258P61165 79 aa11.16□□□□□ -0.62
LAPTM4B-201ENST00000445593 LINC01556Q5JQF7 62 aa11.16□□□□□ -0.62
LAPTM4B-201ENST00000445593 LINC00643Q86TS7 51 aa11.16□□□□□ -0.62
LAPTM4B-201ENST00000445593 TM2D3Q9BRN9 247 aa11.16□□□□□ -0.62
LAPTM4B-201ENST00000445593 TRBV10-3A0A0K0K1G6 114 aa11.15□□□□□ -0.62
LAPTM4B-201ENST00000445593 C20orf197Q8N268 126 aa11.15□□□□□ -0.62
LAPTM4B-201ENST00000445593 NDUFC2O95298 119 aa11.14□□□□□ -0.63
LAPTM4B-201ENST00000445593 ATOX1O00244 68 aa11.14□□□□□ -0.63
LAPTM4B-201ENST00000445593 CSMD3Q7Z407 3707 aa11.14□□□□□ -0.63
LAPTM4B-201ENST00000445593 LINC01600Q96MT4 127 aa11.13□□□□□ -0.63
LAPTM4B-201ENST00000445593 MPLKIPQ8TAP9 179 aa11.12□□□□□ -0.63
LAPTM4B-201ENST00000445593 ORMDL1Q9P0S3 153 aa11.12□□□□□ -0.63
LAPTM4B-201ENST00000445593 LINC00474Q9P2X8 69 aa11.12□□□□□ -0.63
LAPTM4B-201ENST00000445593 TRAV23DV6A0A075B6W5 121 aa11.1□□□□□ -0.63
LAPTM4B-201ENST00000445593 Q6ZRP5 223 aa11.1□□□□□ -0.63
LAPTM4B-201ENST00000445593 Q8N814 137 aa11.1□□□□□ -0.63
LAPTM4B-201ENST00000445593 RBM3P98179 157 aaKnown RBP11.1□□□□□ -0.63
LAPTM4B-201ENST00000445593 SYCNQ0VAF6 134 aa11.08□□□□□ -0.64
LAPTM4B-201ENST00000445593 IMUPQ9GZP8 106 aa11.08□□□□□ -0.64
LAPTM4B-201ENST00000445593 DNAH10OSP0CZ25 163 aa11.08□□□□□ -0.64
LAPTM4B-201ENST00000445593 SERP2Q8N6R1 65 aa11.08□□□□□ -0.64
LAPTM4B-201ENST00000445593 FAM240AA0A1B0GVK7 77 aa11.08□□□□□ -0.64
LAPTM4B-201ENST00000445593 USP17L23D6RBM5 183 aa11.07□□□□□ -0.64
LAPTM4B-201ENST00000445593 GVQW2A0A096LPI5 108 aaPredicted RBP11.07□□□□□ -0.64
LAPTM4B-201ENST00000445593 NDUFC2-KCTD14E9PQ53 114 aa11.06□□□□□ -0.64
LAPTM4B-201ENST00000445593 INAFM2P0DMQ5 153 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms