RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 FABP4P15090 132 aa5.3□□□□□ -1.56
HDAC8-215ENST00000444609 JOSD1Q15040 202 aaPredicted RBP5.3□□□□□ -1.56
HDAC8-215ENST00000444609 PET117Q6UWS5 81 aa5.3□□□□□ -1.56
HDAC8-215ENST00000444609 HIST1H2BLQ99880 126 aa5.3□□□□□ -1.56
HDAC8-215ENST00000444609 CSDC2Q9Y534 153 aaKnown RBP5.3□□□□□ -1.56
HDAC8-215ENST00000444609 C9orf92A6NGG3 77 aa5.29□□□□□ -1.56
HDAC8-215ENST00000444609 BAGE2Q86Y30 109 aa5.29□□□□□ -1.56
HDAC8-215ENST00000444609 A0A1B0GV90 55 aa5.28□□□□□ -1.56
HDAC8-215ENST00000444609 RPL32P62910 135 aaKnown RBP5.28□□□□□ -1.56
HDAC8-215ENST00000444609 PDZD11Q5EBL8 140 aa5.28□□□□□ -1.56
HDAC8-215ENST00000444609 NUDT10Q8NFP7 164 aa5.28□□□□□ -1.56
HDAC8-215ENST00000444609 SPRR4Q96PI1 79 aa5.28□□□□□ -1.56
HDAC8-215ENST00000444609 MRPL18Q9H0U6 180 aaKnown RBP5.28□□□□□ -1.56
HDAC8-215ENST00000444609 F2Z2F3 143 aa5.27□□□□□ -1.57
HDAC8-215ENST00000444609 CT83Q5H943 113 aa5.27□□□□□ -1.57
HDAC8-215ENST00000444609 ATP5L2Q7Z4Y8 100 aa5.27□□□□□ -1.57
HDAC8-215ENST00000444609 RNASE7Q9H1E1 156 aaKnown RBP5.27□□□□□ -1.57
HDAC8-215ENST00000444609 A8MWL6 223 aa5.26□□□□□ -1.57
HDAC8-215ENST00000444609 TMEM238C9JI98 176 aa5.26□□□□□ -1.57
HDAC8-215ENST00000444609 TSTD3H0UI37 97 aa5.26□□□□□ -1.57
HDAC8-215ENST00000444609 RPS20P60866 119 aaKnown RBP5.26□□□□□ -1.57
HDAC8-215ENST00000444609 FAM19A1Q7Z5A9 133 aa5.26□□□□□ -1.57
HDAC8-215ENST00000444609 NUDT11Q96G61 164 aa5.26□□□□□ -1.57
HDAC8-215ENST00000444609 NAT8BQ9UHF3 227 aa5.26□□□□□ -1.57
HDAC8-215ENST00000444609 TRBV6-5A0A0K0K1A5 114 aa5.25□□□□□ -1.57
HDAC8-215ENST00000444609 SCGB1D1O95968 90 aa5.25□□□□□ -1.57
HDAC8-215ENST00000444609 TMEM136Q6ZRR5 245 aa5.25□□□□□ -1.57
HDAC8-215ENST00000444609 Q6ZUT4 128 aa5.25□□□□□ -1.57
HDAC8-215ENST00000444609 PPBPP02775 128 aa5.24□□□□□ -1.57
HDAC8-215ENST00000444609 LGALS3P17931 250 aaKnown RBP5.24□□□□□ -1.57
HDAC8-215ENST00000444609 BAGE3Q86Y29 109 aa5.24□□□□□ -1.57
HDAC8-215ENST00000444609 RPL37P61927 97 aaKnown RBP5.23□□□□□ -1.57
HDAC8-215ENST00000444609 SMAGPQ0VAQ4 97 aa5.23□□□□□ -1.57
HDAC8-215ENST00000444609 C14orf144Q96I85 54 aa5.23□□□□□ -1.57
HDAC8-215ENST00000444609 IGLV5-37A0A075B6J1 123 aa5.22□□□□□ -1.57
HDAC8-215ENST00000444609 IGKV2-28A0A075B6P5 120 aa5.22□□□□□ -1.57
HDAC8-215ENST00000444609 A0A1B0GXF2 115 aa5.22□□□□□ -1.57
HDAC8-215ENST00000444609 HIGD1CA8MV81 97 aa5.22□□□□□ -1.57
HDAC8-215ENST00000444609 DLEU1O43261 78 aa5.22□□□□□ -1.57
HDAC8-215ENST00000444609 SERF1AO75920 110 aa5.22□□□□□ -1.57
HDAC8-215ENST00000444609 IGKV2D-28P01615 120 aa5.22□□□□□ -1.57
HDAC8-215ENST00000444609 HBBP68871 147 aa5.22□□□□□ -1.57
HDAC8-215ENST00000444609 TWIST1Q15672 202 aa5.22□□□□□ -1.57
HDAC8-215ENST00000444609 MRPL54Q6P161 138 aaKnown RBP5.22□□□□□ -1.57
HDAC8-215ENST00000444609 A0A1B0GW15 77 aa5.21□□□□□ -1.58
HDAC8-215ENST00000444609 A4D1N5 150 aa5.21□□□□□ -1.58
HDAC8-215ENST00000444609 KRTAP5-9P26371 169 aa5.21□□□□□ -1.58
HDAC8-215ENST00000444609 DDTP30046 118 aa5.21□□□□□ -1.58
HDAC8-215ENST00000444609 POLR2KP53803 58 aaKnown RBP5.21□□□□□ -1.58
HDAC8-215ENST00000444609 LINC00310P59036 64 aa5.21□□□□□ -1.58
HDAC8-215ENST00000444609 MTURNQ8N3F0 131 aa5.21□□□□□ -1.58
HDAC8-215ENST00000444609 HIGD2AQ9BW72 106 aa5.21□□□□□ -1.58
HDAC8-215ENST00000444609 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.58
HDAC8-215ENST00000444609 TMEM126AQ9H061 195 aa5.21□□□□□ -1.58
HDAC8-215ENST00000444609 GEMIN7Q9H840 131 aaKnown RBP5.21□□□□□ -1.58
HDAC8-215ENST00000444609 ST20Q9HBF5 79 aa5.21□□□□□ -1.58
HDAC8-215ENST00000444609 TRBV27A0A0K0K1C4 114 aa5.2□□□□□ -1.58
HDAC8-215ENST00000444609 IGLV6-57P01721 117 aa5.2□□□□□ -1.58
HDAC8-215ENST00000444609 RIGQ13278 110 aa5.2□□□□□ -1.58
HDAC8-215ENST00000444609 TIMM21Q9BVV7 248 aa5.2□□□□□ -1.58
HDAC8-215ENST00000444609 ZNF706Q9Y5V0 76 aaPredicted RBP5.2□□□□□ -1.58
HDAC8-215ENST00000444609 A0A1B0GV72 72 aa5.19□□□□□ -1.58
HDAC8-215ENST00000444609 SCGB1A1P11684 91 aa5.19□□□□□ -1.58
HDAC8-215ENST00000444609 KIAA1644Q3SXP7 199 aa5.19□□□□□ -1.58
HDAC8-215ENST00000444609 TEX43Q6ZNM6 134 aa5.19□□□□□ -1.58
HDAC8-215ENST00000444609 SSBP3-AS1Q7Z2R9 100 aa5.19□□□□□ -1.58
HDAC8-215ENST00000444609 C18orf32Q8TCD1 76 aa5.19□□□□□ -1.58
HDAC8-215ENST00000444609 FAM104AQ969W3 186 aa5.19□□□□□ -1.58
HDAC8-215ENST00000444609 BORCS7Q96B45 105 aa5.19□□□□□ -1.58
HDAC8-215ENST00000444609 ALKBH7Q9BT30 221 aaPredicted RBP5.19□□□□□ -1.58
HDAC8-215ENST00000444609 KRTAP2-2Q9BYT5 123 aa5.19□□□□□ -1.58
HDAC8-215ENST00000444609 KRTAP2-1Q9BYU5 128 aa5.19□□□□□ -1.58
HDAC8-215ENST00000444609 PRO1933Q9H354 126 aa5.19□□□□□ -1.58
HDAC8-215ENST00000444609 A0A1B0GUT8 65 aa5.18□□□□□ -1.58
HDAC8-215ENST00000444609 M0R378 163 aa5.18□□□□□ -1.58
HDAC8-215ENST00000444609 CHCHD1Q96BP2 118 aaKnown RBP5.18□□□□□ -1.58
HDAC8-215ENST00000444609 CNFNQ9BYD5 112 aa5.18□□□□□ -1.58
HDAC8-215ENST00000444609 HSBP1O75506 76 aa5.17□□□□□ -1.58
HDAC8-215ENST00000444609 CKS1BP61024 79 aa5.17□□□□□ -1.58
HDAC8-215ENST00000444609 MOBPQ13875 183 aa5.17□□□□□ -1.58
HDAC8-215ENST00000444609 LCE1DQ5T752 114 aa5.17□□□□□ -1.58
HDAC8-215ENST00000444609 NKAPP1Q8N9T2 125 aa5.17□□□□□ -1.58
HDAC8-215ENST00000444609 VCX2Q9H322 139 aa5.17□□□□□ -1.58
HDAC8-215ENST00000444609 C20orf202A1L168 122 aa5.16□□□□□ -1.58
HDAC8-215ENST00000444609 FCER1GP30273 86 aa5.16□□□□□ -1.58
HDAC8-215ENST00000444609 PMCHL1Q16048 86 aa5.16□□□□□ -1.58
HDAC8-215ENST00000444609 VAMP8Q9BV40 100 aa5.16□□□□□ -1.58
HDAC8-215ENST00000444609 C3orf79P0CE67 100 aa5.15□□□□□ -1.59
HDAC8-215ENST00000444609 KRTDAPP60985 99 aa5.15□□□□□ -1.59
HDAC8-215ENST00000444609 MIEN1Q9BRT3 115 aa5.15□□□□□ -1.59
HDAC8-215ENST00000444609 VCYO14598 125 aa5.14□□□□□ -1.59
HDAC8-215ENST00000444609 PRSS2P07478 247 aa5.14□□□□□ -1.59
HDAC8-215ENST00000444609 LINC00483Q53H64 154 aa5.14□□□□□ -1.59
HDAC8-215ENST00000444609 C6orf226Q5I0X4 101 aa5.14□□□□□ -1.59
HDAC8-215ENST00000444609 LINC01561Q8N1V8 128 aa5.14□□□□□ -1.59
HDAC8-215ENST00000444609 IGLV9-49A0A0B4J1Y8 123 aa5.13□□□□□ -1.59
HDAC8-215ENST00000444609 M0R143 59 aa5.13□□□□□ -1.59
HDAC8-215ENST00000444609 TOMM7Q9P0U1 55 aa5.13□□□□□ -1.59
HDAC8-215ENST00000444609 HSPB8Q9UJY1 196 aa5.13□□□□□ -1.59
HDAC8-215ENST00000444609 LEPROTL1O95214 131 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms