RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 CSDC2Q9Y534 153 aaKnown RBP4.89□□□□□ -1.63
LINC00578-201ENST00000439009 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.88□□□□□ -1.63
LINC00578-201ENST00000439009 GVQW2A0A096LPI5 108 aaPredicted RBP4.88□□□□□ -1.63
LINC00578-201ENST00000439009 A0A1W2PPM0 123 aa4.88□□□□□ -1.63
LINC00578-201ENST00000439009 IGKV2-29A2NJV5 120 aaPredicted RBP4.88□□□□□ -1.63
LINC00578-201ENST00000439009 K7EP34 96 aa4.88□□□□□ -1.63
LINC00578-201ENST00000439009 CCL25O15444 150 aa4.88□□□□□ -1.63
LINC00578-201ENST00000439009 HERVK_113P63121 156 aa4.88□□□□□ -1.63
LINC00578-201ENST00000439009 SPCS1Q9Y6A9 102 aa4.88□□□□□ -1.63
LINC00578-201ENST00000439009 A0A096LNI7 61 aa4.87□□□□□ -1.63
LINC00578-201ENST00000439009 IGHV1-58A0A0C4DH39 117 aa4.87□□□□□ -1.63
LINC00578-201ENST00000439009 A0A1B0GWB2 263 aa4.87□□□□□ -1.63
LINC00578-201ENST00000439009 GAGE12HA6NDE8 117 aa4.87□□□□□ -1.63
LINC00578-201ENST00000439009 RPL24P83731 157 aaKnown RBP4.87□□□□□ -1.63
LINC00578-201ENST00000439009 Q6ZRP5 223 aa4.87□□□□□ -1.63
LINC00578-201ENST00000439009 Q6ZVH6 145 aa4.87□□□□□ -1.63
LINC00578-201ENST00000439009 COPS9Q8WXC6 57 aa4.87□□□□□ -1.63
LINC00578-201ENST00000439009 KRTAP9-2Q9BYQ4 174 aa4.87□□□□□ -1.63
LINC00578-201ENST00000439009 MUC2Q02817 5179 aa4.87□□□□□ -1.63
LINC00578-201ENST00000439009 LPAP08519 4548 aa4.86□□□□□ -1.63
LINC00578-201ENST00000439009 IGKV2-24A0A0C4DH68 120 aa4.86□□□□□ -1.63
LINC00578-201ENST00000439009 UBE2D1P51668 147 aa4.86□□□□□ -1.63
LINC00578-201ENST00000439009 Q6ZUT4 128 aa4.86□□□□□ -1.63
LINC00578-201ENST00000439009 FAM19A3Q7Z5A8 133 aa4.86□□□□□ -1.63
LINC00578-201ENST00000439009 OPRPNQ99935 248 aaPredicted RBP4.86□□□□□ -1.63
LINC00578-201ENST00000439009 K7ERU9 68 aa4.85□□□□□ -1.63
LINC00578-201ENST00000439009 HIGD2BQ4VC39 106 aa4.85□□□□□ -1.63
LINC00578-201ENST00000439009 PKIGQ9Y2B9 76 aa4.85□□□□□ -1.63
LINC00578-201ENST00000439009 IGLV5-45A0A087WSX0 123 aa4.84□□□□□ -1.63
LINC00578-201ENST00000439009 TIMM17BO60830 172 aa4.84□□□□□ -1.63
LINC00578-201ENST00000439009 IFITM1P13164 125 aa4.84□□□□□ -1.63
LINC00578-201ENST00000439009 FOXI1Q12951 378 aa4.84□□□□□ -1.63
LINC00578-201ENST00000439009 CHCHD10Q8WYQ3 142 aaPredicted RBP4.84□□□□□ -1.63
LINC00578-201ENST00000439009 NDUFA12Q9UI09 145 aa4.84□□□□□ -1.63
LINC00578-201ENST00000439009 A0A0B4J2C4 111 aa4.83□□□□□ -1.64
LINC00578-201ENST00000439009 A0A0J9YXY3 114 aa4.83□□□□□ -1.64
LINC00578-201ENST00000439009 K7ERJ3 54 aa4.83□□□□□ -1.64
LINC00578-201ENST00000439009 APOMO95445 188 aa4.83□□□□□ -1.64
LINC00578-201ENST00000439009 TSPEAR-AS2P59090 65 aa4.83□□□□□ -1.64
LINC00578-201ENST00000439009 SPANXDQ9BXN6 97 aa4.83□□□□□ -1.64
LINC00578-201ENST00000439009 CDC42SE2Q9NRR3 84 aa4.83□□□□□ -1.64
LINC00578-201ENST00000439009 SPANXCQ9NY87 97 aa4.83□□□□□ -1.64
LINC00578-201ENST00000439009 PSORS1C2Q9UIG4 136 aa4.83□□□□□ -1.64
LINC00578-201ENST00000439009 TRBV20-1A0A075B6N2 111 aa4.82□□□□□ -1.64
LINC00578-201ENST00000439009 F8W1H4 67 aa4.82□□□□□ -1.64
LINC00578-201ENST00000439009 J3QR89 54 aa4.82□□□□□ -1.64
LINC00578-201ENST00000439009 SPINK8P0C7L1 97 aa4.82□□□□□ -1.64
LINC00578-201ENST00000439009 HERV-K104P63124 156 aa4.82□□□□□ -1.64
LINC00578-201ENST00000439009 RNASE13Q5GAN3 156 aaKnown RBP4.82□□□□□ -1.64
LINC00578-201ENST00000439009 SFTA2Q6UW10 78 aa4.82□□□□□ -1.64
LINC00578-201ENST00000439009 PRO1854Q9UHT4 67 aa4.82□□□□□ -1.64
LINC00578-201ENST00000439009 CBY1Q9Y3M2 126 aa4.82□□□□□ -1.64
LINC00578-201ENST00000439009 NDUFA1O15239 70 aa4.81□□□□□ -1.64
LINC00578-201ENST00000439009 FAM104AQ969W3 186 aa4.81□□□□□ -1.64
LINC00578-201ENST00000439009 CARD19Q96LW7 228 aa4.81□□□□□ -1.64
LINC00578-201ENST00000439009 NAA38Q9BRA0 125 aaKnown RBP4.81□□□□□ -1.64
LINC00578-201ENST00000439009 CDKN2A-AS1Q9UH64 79 aa4.81□□□□□ -1.64
LINC00578-201ENST00000439009 TRAV13-1A0A0B4J241 112 aa4.8□□□□□ -1.64
LINC00578-201ENST00000439009 IGKV3OR2-268A0A0C4DH90 116 aa4.8□□□□□ -1.64
LINC00578-201ENST00000439009 IGLV5-39A0A0G2JS06 123 aa4.8□□□□□ -1.64
LINC00578-201ENST00000439009 A0A1W2PNN7 141 aa4.8□□□□□ -1.64
LINC00578-201ENST00000439009 A4D1N5 150 aa4.8□□□□□ -1.64
LINC00578-201ENST00000439009 SCGB1C2P0DMR2 95 aa4.8□□□□□ -1.64
LINC00578-201ENST00000439009 SYCNQ0VAF6 134 aa4.8□□□□□ -1.64
LINC00578-201ENST00000439009 LINC00242Q5T6M2 205 aa4.8□□□□□ -1.64
LINC00578-201ENST00000439009 LCE2CQ5TA81 110 aa4.8□□□□□ -1.64
LINC00578-201ENST00000439009 MUSTN1Q8IVN3 82 aa4.8□□□□□ -1.64
LINC00578-201ENST00000439009 ERG28Q9UKR5 140 aa4.8□□□□□ -1.64
LINC00578-201ENST00000439009 LOC107984156A0A0G2JMH3 177 aa4.79□□□□□ -1.64
LINC00578-201ENST00000439009 LINC00959A0A1B0GUT2 108 aa4.79□□□□□ -1.64
LINC00578-201ENST00000439009 TSPAN13O95857 204 aa4.79□□□□□ -1.64
LINC00578-201ENST00000439009 PRSS2P07478 247 aa4.79□□□□□ -1.64
LINC00578-201ENST00000439009 COX6CP09669 75 aa4.79□□□□□ -1.64
LINC00578-201ENST00000439009 CFC1BP0CG36 223 aa4.79□□□□□ -1.64
LINC00578-201ENST00000439009 CFC1P0CG37 223 aa4.79□□□□□ -1.64
LINC00578-201ENST00000439009 PSMB2P49721 201 aa4.79□□□□□ -1.64
LINC00578-201ENST00000439009 SS18Q15532 418 aa4.79□□□□□ -1.64
LINC00578-201ENST00000439009 Q1RN00 199 aa4.79□□□□□ -1.64
LINC00578-201ENST00000439009 OCIAD2Q56VL3 154 aa4.79□□□□□ -1.64
LINC00578-201ENST00000439009 MEIG1Q5JSS6 88 aa4.79□□□□□ -1.64
LINC00578-201ENST00000439009 ARL17AQ8IVW1 177 aa4.79□□□□□ -1.64
LINC00578-201ENST00000439009 LINC01561Q8N1V8 128 aa4.79□□□□□ -1.64
LINC00578-201ENST00000439009 LINC00526Q96FQ7 95 aa4.79□□□□□ -1.64
LINC00578-201ENST00000439009 PPDPFQ9H3Y8 114 aa4.79□□□□□ -1.64
LINC00578-201ENST00000439009 A0A0U1RQV1 116 aa4.78□□□□□ -1.64
LINC00578-201ENST00000439009 LOC107984640A0A0U1RRK4 108 aa4.78□□□□□ -1.64
LINC00578-201ENST00000439009 LOC100996750A0A140TA64 210 aa4.78□□□□□ -1.64
LINC00578-201ENST00000439009 KRTAP9-6A0A140TA67 174 aa4.78□□□□□ -1.64
LINC00578-201ENST00000439009 SMIM1B2RUZ4 78 aa4.78□□□□□ -1.64
LINC00578-201ENST00000439009 XCL1P47992 114 aa4.78□□□□□ -1.64
LINC00578-201ENST00000439009 SMCPP49901 116 aaPredicted RBP4.78□□□□□ -1.64
LINC00578-201ENST00000439009 CD164L2Q6UWJ8 174 aa4.78□□□□□ -1.64
LINC00578-201ENST00000439009 PRR26Q8N8Z3 221 aa4.78□□□□□ -1.64
LINC00578-201ENST00000439009 KRTAP4-6Q9BYQ5 205 aa4.78□□□□□ -1.64
LINC00578-201ENST00000439009 FAT4Q6V0I7 4981 aa4.78□□□□□ -1.64
LINC00578-201ENST00000439009 IGLV1-50A0A075B6I6 118 aa4.77□□□□□ -1.65
LINC00578-201ENST00000439009 ZNF561-AS1K7EIQ3 104 aa4.77□□□□□ -1.65
LINC00578-201ENST00000439009 C9orf116Q5BN46 136 aaPredicted RBP4.77□□□□□ -1.65
LINC00578-201ENST00000439009 COX7B2Q8TF08 81 aa4.77□□□□□ -1.65
LINC00578-201ENST00000439009 DIRC1Q969H9 104 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms