RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 VPREB1P12018 145 aa14.94□□□□□ -0.02
RAPGEF1-206ENST00000438647 HIST1H2BOP23527 126 aa14.94□□□□□ -0.02
RAPGEF1-206ENST00000438647 HIST1H2BBP33778 126 aa14.94□□□□□ -0.02
RAPGEF1-206ENST00000438647 RPL28P46779 137 aaKnown RBP14.94□□□□□ -0.02
RAPGEF1-206ENST00000438647 HIST1H2BDP58876 126 aa14.94□□□□□ -0.02
RAPGEF1-206ENST00000438647 HIST1H2BCP62807 126 aa14.94□□□□□ -0.02
RAPGEF1-206ENST00000438647 HIST2H2BEQ16778 126 aa14.94□□□□□ -0.02
RAPGEF1-206ENST00000438647 MEIG1Q5JSS6 88 aa14.94□□□□□ -0.02
RAPGEF1-206ENST00000438647 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.94□□□□□ -0.02
RAPGEF1-206ENST00000438647 HIST1H2BHQ93079 126 aa14.94□□□□□ -0.02
RAPGEF1-206ENST00000438647 HIST1H2BNQ99877 126 aa14.94□□□□□ -0.02
RAPGEF1-206ENST00000438647 HIST1H2BMQ99879 126 aa14.94□□□□□ -0.02
RAPGEF1-206ENST00000438647 ATP6V1G1O75348 118 aa14.93□□□□□ -0.02
RAPGEF1-206ENST00000438647 NDUFA12Q9UI09 145 aa14.93□□□□□ -0.02
RAPGEF1-206ENST00000438647 MYMXA0A1B0GTQ4 84 aa14.92□□□□□ -0.02
RAPGEF1-206ENST00000438647 HERVK_113P61574 105 aa14.92□□□□□ -0.02
RAPGEF1-206ENST00000438647 A0A0U1RRA0 63 aa14.91□□□□□ -0.02
RAPGEF1-206ENST00000438647 IGKCP01834 107 aa14.91□□□□□ -0.02
RAPGEF1-206ENST00000438647 PLEKHB2Q96CS7 222 aa14.91□□□□□ -0.02
RAPGEF1-206ENST00000438647 IGKV2-28A0A075B6P5 120 aa14.9□□□□□ -0.02
RAPGEF1-206ENST00000438647 IGKV2D-28P01615 120 aa14.9□□□□□ -0.02
RAPGEF1-206ENST00000438647 IGLV1-50A0A075B6I6 118 aa14.89□□□□□ -0.03
RAPGEF1-206ENST00000438647 LEPROTO15243 131 aa14.89□□□□□ -0.03
RAPGEF1-206ENST00000438647 SMIM13P0DJ93 91 aa14.89□□□□□ -0.03
RAPGEF1-206ENST00000438647 PRR26Q8N8Z3 221 aa14.89□□□□□ -0.03
RAPGEF1-206ENST00000438647 KRTAP1-4P0C5Y4 121 aa14.88□□□□□ -0.03
RAPGEF1-206ENST00000438647 PMCHL2Q9BQD1 86 aa14.88□□□□□ -0.03
RAPGEF1-206ENST00000438647 UBE2AP49459 152 aa14.86□□□□□ -0.03
RAPGEF1-206ENST00000438647 J3QQQ9 107 aa14.85□□□□□ -0.03
RAPGEF1-206ENST00000438647 MIR7-3HGQ8N6C7 128 aa14.85□□□□□ -0.03
RAPGEF1-206ENST00000438647 RPL13AP40429 203 aaKnown RBP14.84□□□□□ -0.03
RAPGEF1-206ENST00000438647 NMUP48645 174 aa14.84□□□□□ -0.03
RAPGEF1-206ENST00000438647 TSPEAR-AS2P59090 65 aa14.84□□□□□ -0.03
RAPGEF1-206ENST00000438647 Q8NDZ9 215 aa14.84□□□□□ -0.03
RAPGEF1-206ENST00000438647 SYS1-DBNDD2H3BUS1 97 aa14.82□□□□□ -0.04
RAPGEF1-206ENST00000438647 LGALS3P17931 250 aaKnown RBP14.82□□□□□ -0.04
RAPGEF1-206ENST00000438647 BOD1L2Q8IYS8 172 aa14.82□□□□□ -0.04
RAPGEF1-206ENST00000438647 TMEM126AQ9H061 195 aa14.82□□□□□ -0.04
RAPGEF1-206ENST00000438647 M0R378 163 aa14.81□□□□□ -0.04
RAPGEF1-206ENST00000438647 KRTAP13-1Q8IUC0 172 aa14.8□□□□□ -0.04
RAPGEF1-206ENST00000438647 TMEM238C9JI98 176 aa14.78□□□□□ -0.04
RAPGEF1-206ENST00000438647 COA6Q5JTJ3 125 aaKnown RBP14.78□□□□□ -0.04
RAPGEF1-206ENST00000438647 FAM19A1Q7Z5A9 133 aa14.78□□□□□ -0.04
RAPGEF1-206ENST00000438647 IGKV2D-26A0A0A0MRZ7 120 aa14.77□□□□□ -0.05
RAPGEF1-206ENST00000438647 PET117Q6UWS5 81 aa14.77□□□□□ -0.05
RAPGEF1-206ENST00000438647 E9PLD3 99 aa14.76□□□□□ -0.05
RAPGEF1-206ENST00000438647 LINC01545Q5VT33 79 aa14.75□□□□□ -0.05
RAPGEF1-206ENST00000438647 PRLHP81277 87 aa14.74□□□□□ -0.05
RAPGEF1-206ENST00000438647 MIEN1Q9BRT3 115 aa14.73□□□□□ -0.05
RAPGEF1-206ENST00000438647 LOC107984156A0A0G2JMH3 177 aa14.72□□□□□ -0.05
RAPGEF1-206ENST00000438647 NCR3O14931 201 aa14.72□□□□□ -0.05
RAPGEF1-206ENST00000438647 ARL17AQ8IVW1 177 aa14.72□□□□□ -0.05
RAPGEF1-206ENST00000438647 DAND5Q8N907 189 aa14.72□□□□□ -0.05
RAPGEF1-206ENST00000438647 CRYGAP11844 174 aa14.71□□□□□ -0.05
RAPGEF1-206ENST00000438647 PRYO14603 147 aa14.7□□□□□ -0.06
RAPGEF1-206ENST00000438647 C3orf79P0CE67 100 aa14.69□□□□□ -0.06
RAPGEF1-206ENST00000438647 S100A12P80511 92 aa14.69□□□□□ -0.06
RAPGEF1-206ENST00000438647 S100A1P23297 94 aa14.68□□□□□ -0.06
RAPGEF1-206ENST00000438647 A0A0J9YXY3 114 aa14.67□□□□□ -0.06
RAPGEF1-206ENST00000438647 UBR4Q5T4S7 5183 aa14.66□□□□□ -0.06
RAPGEF1-206ENST00000438647 A0A087X002 238 aa14.66□□□□□ -0.06
RAPGEF1-206ENST00000438647 TRBV10-2A0A0K0K1G8 114 aa14.66□□□□□ -0.06
RAPGEF1-206ENST00000438647 KRTDAPP60985 99 aa14.66□□□□□ -0.06
RAPGEF1-206ENST00000438647 KCNQ1DNQ9H478 68 aa14.66□□□□□ -0.06
RAPGEF1-206ENST00000438647 FAM229BQ4G0N7 80 aa14.65□□□□□ -0.06
RAPGEF1-206ENST00000438647 TRBV10-3A0A0K0K1G6 114 aa14.64□□□□□ -0.07
RAPGEF1-206ENST00000438647 C20orf202A1L168 122 aa14.64□□□□□ -0.07
RAPGEF1-206ENST00000438647 LINC00337Q8N6G1 96 aa14.64□□□□□ -0.07
RAPGEF1-206ENST00000438647 TYMSOSQ8TAI1 123 aa14.64□□□□□ -0.07
RAPGEF1-206ENST00000438647 HIGD2AQ9BW72 106 aa14.64□□□□□ -0.07
RAPGEF1-206ENST00000438647 SPANXB1Q9NS25 103 aaPredicted RBP14.64□□□□□ -0.07
RAPGEF1-206ENST00000438647 NDUFC2O95298 119 aa14.63□□□□□ -0.07
RAPGEF1-206ENST00000438647 SPRR1AP35321 89 aa14.62□□□□□ -0.07
RAPGEF1-206ENST00000438647 ANAPC11Q9NYG5 84 aa14.62□□□□□ -0.07
RAPGEF1-206ENST00000438647 LRP2P98164 4655 aa14.62□□□□□ -0.07
RAPGEF1-206ENST00000438647 ETDCA0A1B0GVM5 59 aa14.6□□□□□ -0.07
RAPGEF1-206ENST00000438647 DDTP30046 118 aa14.6□□□□□ -0.07
RAPGEF1-206ENST00000438647 AKR1D1P51857 326 aa14.59□□□□□ -0.07
RAPGEF1-206ENST00000438647 ADAMTSL4-AS1Q5T5F5 129 aa14.59□□□□□ -0.07
RAPGEF1-206ENST00000438647 ZNF815PA8K554 130 aa14.58□□□□□ -0.08
RAPGEF1-206ENST00000438647 TIMM17BO60830 172 aa14.58□□□□□ -0.08
RAPGEF1-206ENST00000438647 NPC2P61916 151 aa14.57□□□□□ -0.08
RAPGEF1-206ENST00000438647 S100A7L2Q5SY68 101 aa14.57□□□□□ -0.08
RAPGEF1-206ENST00000438647 KRTAP4-16G5E9R7 235 aaPredicted RBP14.56□□□□□ -0.08
RAPGEF1-206ENST00000438647 SOSTDC1Q6X4U4 206 aa14.56□□□□□ -0.08
RAPGEF1-206ENST00000438647 ZNF706Q9Y5V0 76 aaPredicted RBP14.56□□□□□ -0.08
RAPGEF1-206ENST00000438647 KRTAP13-2Q52LG2 175 aa14.55□□□□□ -0.08
RAPGEF1-206ENST00000438647 LITAFQ99732 161 aa14.53□□□□□ -0.08
RAPGEF1-206ENST00000438647 IGLV6-57P01721 117 aa14.52□□□□□ -0.09
RAPGEF1-206ENST00000438647 SPRR4Q96PI1 79 aa14.52□□□□□ -0.09
RAPGEF1-206ENST00000438647 EIF4EBP3O60516 100 aaPredicted RBP14.51□□□□□ -0.09
RAPGEF1-206ENST00000438647 LINC00308Q8TCZ7 52 aa14.51□□□□□ -0.09
RAPGEF1-206ENST00000438647 TTTY13Q9BZ97 58 aa14.51□□□□□ -0.09
RAPGEF1-206ENST00000438647 SPANXCQ9NY87 97 aa14.51□□□□□ -0.09
RAPGEF1-206ENST00000438647 CBY1Q9Y3M2 126 aa14.51□□□□□ -0.09
RAPGEF1-206ENST00000438647 S100A2P29034 98 aa14.5□□□□□ -0.09
RAPGEF1-206ENST00000438647 B5MCH6 92 aa14.49□□□□□ -0.09
RAPGEF1-206ENST00000438647 TSPAN13O95857 204 aa14.49□□□□□ -0.09
RAPGEF1-206ENST00000438647 SMCR5Q8TEV8 140 aa14.49□□□□□ -0.09
RAPGEF1-206ENST00000438647 TRAV23DV6A0A075B6W5 121 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms