RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 MOBPQ13875 183 aa8.16□□□□□ -1.1
PTCH1-209ENST00000437951 CRIPTQ9P021 101 aa8.15□□□□□ -1.1
PTCH1-209ENST00000437951 KIAA0087Q14695 138 aa8.15□□□□□ -1.1
PTCH1-209ENST00000437951 FAM19A4Q96LR4 140 aa8.15□□□□□ -1.1
PTCH1-209ENST00000437951 DEFB116Q30KQ4 102 aa8.15□□□□□ -1.11
PTCH1-209ENST00000437951 PCSK5Q92824 1860 aa8.14□□□□□ -1.11
PTCH1-209ENST00000437951 PKD1L2Q7Z442 2459 aa8.14□□□□□ -1.11
PTCH1-209ENST00000437951 SSBP3-AS1Q7Z2R9 100 aa8.14□□□□□ -1.11
PTCH1-209ENST00000437951 LINC01556Q5JQF7 62 aa8.14□□□□□ -1.11
PTCH1-209ENST00000437951 C1orf134Q5TEV5 83 aa8.13□□□□□ -1.11
PTCH1-209ENST00000437951 IGLV5-45A0A087WSX0 123 aa8.13□□□□□ -1.11
PTCH1-209ENST00000437951 Q8NBF4 154 aa8.13□□□□□ -1.11
PTCH1-209ENST00000437951 KLKP1Q107X0 134 aa8.12□□□□□ -1.11
PTCH1-209ENST00000437951 Q8NA96 180 aa8.12□□□□□ -1.11
PTCH1-209ENST00000437951 TM2D3Q9BRN9 247 aa8.12□□□□□ -1.11
PTCH1-209ENST00000437951 MTORP42345 2549 aa8.12□□□□□ -1.11
PTCH1-209ENST00000437951 PRR15Q8IV56 129 aa8.12□□□□□ -1.11
PTCH1-209ENST00000437951 MDFIQ99750 246 aa8.12□□□□□ -1.11
PTCH1-209ENST00000437951 IGF2RP11717 2491 aa8.11□□□□□ -1.11
PTCH1-209ENST00000437951 PLA2G1BP04054 148 aaKnown RBP8.11□□□□□ -1.11
PTCH1-209ENST00000437951 COA5Q86WW8 74 aa8.11□□□□□ -1.11
PTCH1-209ENST00000437951 SMCR5Q8TEV8 140 aa8.11□□□□□ -1.11
PTCH1-209ENST00000437951 NCOR2Q9Y618 2525 aa8.1□□□□□ -1.11
PTCH1-209ENST00000437951 LINC01006Q8NI28 216 aa8.09□□□□□ -1.11
PTCH1-209ENST00000437951 MUC22E2RYF6 1773 aaPredicted RBP8.09□□□□□ -1.11
PTCH1-209ENST00000437951 TRBV7-4A0A0J9YYF1 115 aa8.09□□□□□ -1.11
PTCH1-209ENST00000437951 MIR22HGQ0VDD5 57 aa8.08□□□□□ -1.12
PTCH1-209ENST00000437951 LINC00313P59037 77 aa8.08□□□□□ -1.12
PTCH1-209ENST00000437951 C22orf24Q9Y442 160 aa8.08□□□□□ -1.12
PTCH1-209ENST00000437951 LINC01600Q96MT4 127 aa8.08□□□□□ -1.12
PTCH1-209ENST00000437951 SPTBN4Q9H254 2564 aa8.08□□□□□ -1.12
PTCH1-209ENST00000437951 WIPF1O43516 503 aa8.07□□□□□ -1.12
PTCH1-209ENST00000437951 ODF3L2Q3SX64 289 aa8.07□□□□□ -1.12
PTCH1-209ENST00000437951 A8MTW9 85 aa8.07□□□□□ -1.12
PTCH1-209ENST00000437951 IGLV1-51P01701 117 aa8.07□□□□□ -1.12
PTCH1-209ENST00000437951 C19orf84I3L1E1 186 aa8.06□□□□□ -1.12
PTCH1-209ENST00000437951 FAM229AH3BQW9 127 aa8.06□□□□□ -1.12
PTCH1-209ENST00000437951 A8MUN3 132 aa8.06□□□□□ -1.12
PTCH1-209ENST00000437951 Q6ZRU5 148 aa8.06□□□□□ -1.12
PTCH1-209ENST00000437951 LYPD5Q6UWN5 251 aa8.05□□□□□ -1.12
PTCH1-209ENST00000437951 A8MWP4 228 aa8.05□□□□□ -1.12
PTCH1-209ENST00000437951 C10orf99Q6UWK7 81 aa8.05□□□□□ -1.12
PTCH1-209ENST00000437951 IGHV3OR16-9A0A0B4J2B5 98 aa8.04□□□□□ -1.12
PTCH1-209ENST00000437951 Q6ZRX8 168 aa8.04□□□□□ -1.12
PTCH1-209ENST00000437951 KIF25-AS1Q9Y6Z4 181 aa8.04□□□□□ -1.12
PTCH1-209ENST00000437951 FAM218AQ96MZ4 157 aa8.03□□□□□ -1.12
PTCH1-209ENST00000437951 USP24Q9UPU5 2620 aa8.03□□□□□ -1.12
PTCH1-209ENST00000437951 ANKRD11Q6UB99 2663 aaPredicted RBP8.03□□□□□ -1.12
PTCH1-209ENST00000437951 LINC00476Q8WZB0 136 aa8.02□□□□□ -1.12
PTCH1-209ENST00000437951 LINC00336Q6ZUF6 198 aa8.02□□□□□ -1.13
PTCH1-209ENST00000437951 Q6ZSN1 163 aa8.02□□□□□ -1.13
PTCH1-209ENST00000437951 C18orf65Q6ZTR6 163 aa8.01□□□□□ -1.13
PTCH1-209ENST00000437951 BPTFQ12830 3046 aa8□□□□□ -1.13
PTCH1-209ENST00000437951 SPANXA2-OT1Q8N9U9 137 aa7.99□□□□□ -1.13
PTCH1-209ENST00000437951 EPM2AB3EWF7 344 aa7.99□□□□□ -1.13
PTCH1-209ENST00000437951 C16orf95Q9H693 158 aa7.99□□□□□ -1.13
PTCH1-209ENST00000437951 EDN2P20800 178 aa7.99□□□□□ -1.13
PTCH1-209ENST00000437951 CDC42SE1Q9NRR8 79 aa7.99□□□□□ -1.13
PTCH1-209ENST00000437951 POLQO75417 2590 aa7.99□□□□□ -1.13
PTCH1-209ENST00000437951 IGLV8-61A0A075B6I0 122 aa7.98□□□□□ -1.13
PTCH1-209ENST00000437951 LUZP6Q538Z0 58 aa7.98□□□□□ -1.13
PTCH1-209ENST00000437951 A0A1W2PNU3 283 aaPredicted RBP7.98□□□□□ -1.13
PTCH1-209ENST00000437951 LINC00167Q96N53 147 aa7.98□□□□□ -1.13
PTCH1-209ENST00000437951 H3BNG1 76 aa7.97□□□□□ -1.13
PTCH1-209ENST00000437951 MRPL34Q9BQ48 92 aaKnown RBP7.96□□□□□ -1.13
PTCH1-209ENST00000437951 GVQW2A0A096LPI5 108 aaPredicted RBP7.96□□□□□ -1.13
PTCH1-209ENST00000437951 CR1P17927 2039 aa7.96□□□□□ -1.14
PTCH1-209ENST00000437951 J3QL48 77 aa7.95□□□□□ -1.14
PTCH1-209ENST00000437951 H7BZZ5 65 aa7.95□□□□□ -1.14
PTCH1-209ENST00000437951 FASNP49327 2511 aaKnown RBP7.94□□□□□ -1.14
PTCH1-209ENST00000437951 IGLV6-57P01721 117 aa7.94□□□□□ -1.14
PTCH1-209ENST00000437951 LINC01554Q52M75 96 aa7.93□□□□□ -1.14
PTCH1-209ENST00000437951 Q1T7F1 81 aa7.92□□□□□ -1.14
PTCH1-209ENST00000437951 SPACA4Q8TDM5 124 aa7.92□□□□□ -1.14
PTCH1-209ENST00000437951 WISP2O76076 250 aa7.92□□□□□ -1.14
PTCH1-209ENST00000437951 Q6ZRP5 223 aa7.92□□□□□ -1.14
PTCH1-209ENST00000437951 LINC00315P59091 139 aa7.92□□□□□ -1.14
PTCH1-209ENST00000437951 SMR3AQ99954 134 aa7.92□□□□□ -1.14
PTCH1-209ENST00000437951 K7EQZ3 153 aa7.91□□□□□ -1.14
PTCH1-209ENST00000437951 C16orf90A8MZG2 172 aa7.9□□□□□ -1.14
PTCH1-209ENST00000437951 PRO3102Q9H379 93 aa7.87□□□□□ -1.15
PTCH1-209ENST00000437951 C10orf142B7Z368 130 aa7.87□□□□□ -1.15
PTCH1-209ENST00000437951 APLNQ9ULZ1 77 aa7.87□□□□□ -1.15
PTCH1-209ENST00000437951 LITAFQ99732 161 aa7.87□□□□□ -1.15
PTCH1-209ENST00000437951 USP9YO00507 2555 aaPredicted RBP7.87□□□□□ -1.15
PTCH1-209ENST00000437951 RPL37AP61513 92 aaKnown RBP7.87□□□□□ -1.15
PTCH1-209ENST00000437951 COX6B2Q6YFQ2 88 aa7.86□□□□□ -1.15
PTCH1-209ENST00000437951 TYMSOSQ8TAI1 123 aa7.86□□□□□ -1.15
PTCH1-209ENST00000437951 CHD8Q9HCK8 2581 aa7.86□□□□□ -1.15
PTCH1-209ENST00000437951 Q96NJ1 140 aa7.85□□□□□ -1.15
PTCH1-209ENST00000437951 ST20-AS1Q8NBB2 130 aa7.85□□□□□ -1.15
PTCH1-209ENST00000437951 FHL3Q13643 280 aa7.84□□□□□ -1.15
PTCH1-209ENST00000437951 KCNQ1DNQ9H478 68 aa7.82□□□□□ -1.16
PTCH1-209ENST00000437951 C8orf17Q9NRJ1 99 aa7.82□□□□□ -1.16
PTCH1-209ENST00000437951 A0A1B0GVX0 72 aa7.81□□□□□ -1.16
PTCH1-209ENST00000437951 AVPP01185 164 aa7.8□□□□□ -1.16
PTCH1-209ENST00000437951 CENPFP49454 3210 aa7.8□□□□□ -1.16
PTCH1-209ENST00000437951 PRRC2CQ9Y520 2896 aaKnown RBP7.79□□□□□ -1.16
PTCH1-209ENST00000437951 Q75L30 129 aa7.78□□□□□ -1.16
PTCH1-209ENST00000437951 RBM12B-AS1Q9P1G2 102 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms