RNA–Protein interactions for RNA: ENST00000435022.5

HMG20B-205, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-205ENST00000435022 LINC00167Q96N53 147 aa13.18□□□□□ -0.3
HMG20B-205ENST00000435022 RPL37AP8A6NKH3 93 aa13.16□□□□□ -0.3
HMG20B-205ENST00000435022 BCE1O60756 84 aa13.16□□□□□ -0.3
HMG20B-205ENST00000435022 PFN2P35080 140 aa13.15□□□□□ -0.3
HMG20B-205ENST00000435022 SFTA2Q6UW10 78 aa13.15□□□□□ -0.3
HMG20B-205ENST00000435022 ZNF625Q96I27 306 aaPredicted RBP13.15□□□□□ -0.3
HMG20B-205ENST00000435022 MUC2Q02817 5179 aa13.15□□□□□ -0.3
HMG20B-205ENST00000435022 KRTAP13-1Q8IUC0 172 aa13.14□□□□□ -0.31
HMG20B-205ENST00000435022 ERG28Q9UKR5 140 aa13.14□□□□□ -0.31
HMG20B-205ENST00000435022 IGLV5-37A0A075B6J1 123 aa13.13□□□□□ -0.31
HMG20B-205ENST00000435022 GAGE10A6NGK3 116 aa13.13□□□□□ -0.31
HMG20B-205ENST00000435022 ATP6V1G1O75348 118 aa13.13□□□□□ -0.31
HMG20B-205ENST00000435022 S100A1P23297 94 aa13.13□□□□□ -0.31
HMG20B-205ENST00000435022 PLNP26678 52 aa13.13□□□□□ -0.31
HMG20B-205ENST00000435022 MAP1LC3CQ9BXW4 147 aa13.13□□□□□ -0.31
HMG20B-205ENST00000435022 TSPAN13O95857 204 aa13.12□□□□□ -0.31
HMG20B-205ENST00000435022 RPL28P46779 137 aaKnown RBP13.12□□□□□ -0.31
HMG20B-205ENST00000435022 PMCHL2Q9BQD1 86 aa13.12□□□□□ -0.31
HMG20B-205ENST00000435022 ANAPC11Q9NYG5 84 aa13.12□□□□□ -0.31
HMG20B-205ENST00000435022 DPM2O94777 84 aa13.11□□□□□ -0.31
HMG20B-205ENST00000435022 KRTAP13-2Q52LG2 175 aa13.1□□□□□ -0.31
HMG20B-205ENST00000435022 COX17Q14061 63 aa13.09□□□□□ -0.31
HMG20B-205ENST00000435022 IGKCP01834 107 aa13.08□□□□□ -0.32
HMG20B-205ENST00000435022 COA6Q5JTJ3 125 aaKnown RBP13.08□□□□□ -0.32
HMG20B-205ENST00000435022 SND1-IT1Q9HBX3 110 aa13.07□□□□□ -0.32
HMG20B-205ENST00000435022 SYS1-DBNDD2H3BUS1 97 aa13.05□□□□□ -0.32
HMG20B-205ENST00000435022 LEPROTO15243 131 aa13.05□□□□□ -0.32
HMG20B-205ENST00000435022 CRYGAP11844 174 aa13.05□□□□□ -0.32
HMG20B-205ENST00000435022 TSPEAR-AS2P59090 65 aa13.05□□□□□ -0.32
HMG20B-205ENST00000435022 HERVK_113P61574 105 aa13.05□□□□□ -0.32
HMG20B-205ENST00000435022 TYMSOSQ8TAI1 123 aa13.05□□□□□ -0.32
HMG20B-205ENST00000435022 NDUFA12Q9UI09 145 aa13.05□□□□□ -0.32
HMG20B-205ENST00000435022 LINC00158P58513 81 aa13.03□□□□□ -0.32
HMG20B-205ENST00000435022 NKAPP1Q8N9T2 125 aa13.03□□□□□ -0.32
HMG20B-205ENST00000435022 Q8NDZ9 215 aa13.03□□□□□ -0.32
HMG20B-205ENST00000435022 PLEKHB2Q96CS7 222 aa13.03□□□□□ -0.32
HMG20B-205ENST00000435022 IGKV2-28A0A075B6P5 120 aa13.02□□□□□ -0.33
HMG20B-205ENST00000435022 A0A0U1RRA0 63 aa13.02□□□□□ -0.33
HMG20B-205ENST00000435022 IGKV2D-28P01615 120 aa13.02□□□□□ -0.33
HMG20B-205ENST00000435022 HERV-K104P63124 156 aa13.02□□□□□ -0.33
HMG20B-205ENST00000435022 MEIG1Q5JSS6 88 aa13.02□□□□□ -0.33
HMG20B-205ENST00000435022 MYMXA0A1B0GTQ4 84 aa13.01□□□□□ -0.33
HMG20B-205ENST00000435022 VPREB1P12018 145 aa13.01□□□□□ -0.33
HMG20B-205ENST00000435022 J3QQQ9 107 aa13□□□□□ -0.33
HMG20B-205ENST00000435022 SMIM13P0DJ93 91 aa13□□□□□ -0.33
HMG20B-205ENST00000435022 UBE2AP49459 152 aa12.99□□□□□ -0.33
HMG20B-205ENST00000435022 LINC01545Q5VT33 79 aa12.99□□□□□ -0.33
HMG20B-205ENST00000435022 PET117Q6UWS5 81 aa12.99□□□□□ -0.33
HMG20B-205ENST00000435022 C3orf79P0CE67 100 aa12.98□□□□□ -0.33
HMG20B-205ENST00000435022 PRLHP81277 87 aa12.98□□□□□ -0.33
HMG20B-205ENST00000435022 TMEM238C9JI98 176 aa12.97□□□□□ -0.33
HMG20B-205ENST00000435022 LGALS3P17931 250 aaKnown RBP12.97□□□□□ -0.33
HMG20B-205ENST00000435022 RPL24P83731 157 aaKnown RBP12.97□□□□□ -0.33
HMG20B-205ENST00000435022 KRTDAPP60985 99 aa12.96□□□□□ -0.33
HMG20B-205ENST00000435022 RETNLBQ9BQ08 111 aa12.96□□□□□ -0.33
HMG20B-205ENST00000435022 LINC00587B1AMM8 73 aa12.95□□□□□ -0.34
HMG20B-205ENST00000435022 NMUP48645 174 aa12.95□□□□□ -0.34
HMG20B-205ENST00000435022 FAM229BQ4G0N7 80 aa12.95□□□□□ -0.34
HMG20B-205ENST00000435022 MIR7-3HGQ8N6C7 128 aa12.95□□□□□ -0.34
HMG20B-205ENST00000435022 TMEM126AQ9H061 195 aa12.95□□□□□ -0.34
HMG20B-205ENST00000435022 E9PLD3 99 aa12.94□□□□□ -0.34
HMG20B-205ENST00000435022 M0R378 163 aa12.94□□□□□ -0.34
HMG20B-205ENST00000435022 LINC00304Q8N9R0 145 aa12.92□□□□□ -0.34
HMG20B-205ENST00000435022 FAM19A1Q7Z5A9 133 aa12.91□□□□□ -0.34
HMG20B-205ENST00000435022 BOD1L2Q8IYS8 172 aa12.9□□□□□ -0.34
HMG20B-205ENST00000435022 DAND5Q8N907 189 aa12.89□□□□□ -0.35
HMG20B-205ENST00000435022 C20orf202A1L168 122 aa12.88□□□□□ -0.35
HMG20B-205ENST00000435022 C3orf22Q8N5N4 141 aa12.88□□□□□ -0.35
HMG20B-205ENST00000435022 NCR3O14931 201 aa12.86□□□□□ -0.35
HMG20B-205ENST00000435022 HIST3H2BBQ8N257 126 aa12.86□□□□□ -0.35
HMG20B-205ENST00000435022 A0A0J9YXY3 114 aa12.85□□□□□ -0.35
HMG20B-205ENST00000435022 IGKV2D-26A0A0A0MRZ7 120 aa12.84□□□□□ -0.35
HMG20B-205ENST00000435022 LCE2AQ5TA79 106 aaPredicted RBP12.84□□□□□ -0.35
HMG20B-205ENST00000435022 S100A2P29034 98 aa12.83□□□□□ -0.36
HMG20B-205ENST00000435022 FAT4Q6V0I7 4981 aa12.83□□□□□ -0.36
HMG20B-205ENST00000435022 HIST1H2BLQ99880 126 aa12.82□□□□□ -0.36
HMG20B-205ENST00000435022 MUC17Q685J3 4493 aa12.82□□□□□ -0.36
HMG20B-205ENST00000435022 LOC107984156A0A0G2JMH3 177 aa12.81□□□□□ -0.36
HMG20B-205ENST00000435022 S100A6P06703 90 aa12.81□□□□□ -0.36
HMG20B-205ENST00000435022 TPRXLQ17RH7 258 aa12.81□□□□□ -0.36
HMG20B-205ENST00000435022 ARL17AQ8IVW1 177 aa12.81□□□□□ -0.36
HMG20B-205ENST00000435022 ATOH7Q8N100 152 aa12.81□□□□□ -0.36
HMG20B-205ENST00000435022 MIEN1Q9BRT3 115 aa12.81□□□□□ -0.36
HMG20B-205ENST00000435022 ZNF815PA8K554 130 aa12.8□□□□□ -0.36
HMG20B-205ENST00000435022 TTTY13Q9BZ97 58 aa12.8□□□□□ -0.36
HMG20B-205ENST00000435022 HIGD2AQ9BW72 106 aa12.79□□□□□ -0.36
HMG20B-205ENST00000435022 A0A0U1RQV1 116 aa12.78□□□□□ -0.36
HMG20B-205ENST00000435022 NPC2P61916 151 aa12.78□□□□□ -0.36
HMG20B-205ENST00000435022 ANKRD39Q53RE8 183 aa12.78□□□□□ -0.36
HMG20B-205ENST00000435022 ADAMTSL4-AS1Q5T5F5 129 aa12.78□□□□□ -0.36
HMG20B-205ENST00000435022 SPRR4Q96PI1 79 aa12.78□□□□□ -0.36
HMG20B-205ENST00000435022 IGLV7-46A0A075B6I9 117 aa12.77□□□□□ -0.37
HMG20B-205ENST00000435022 AKR1D1P51857 326 aa12.77□□□□□ -0.37
HMG20B-205ENST00000435022 SOSTDC1Q6X4U4 206 aa12.77□□□□□ -0.37
HMG20B-205ENST00000435022 PRYO14603 147 aa12.76□□□□□ -0.37
HMG20B-205ENST00000435022 LITAFQ99732 161 aa12.76□□□□□ -0.37
HMG20B-205ENST00000435022 TRBV10-3A0A0K0K1G6 114 aa12.75□□□□□ -0.37
HMG20B-205ENST00000435022 TIMM17BO60830 172 aa12.75□□□□□ -0.37
HMG20B-205ENST00000435022 CTAG1AP78358 180 aa12.75□□□□□ -0.37
HMG20B-205ENST00000435022 SPANXB1Q9NS25 103 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms