RNA–Protein interactions for RNA: ENST00000434651.6

HLA-DQB1-205, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,642 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-205ENST00000434651 V9GYY9 64 aa9.67□□□□□ -0.86
HLA-DQB1-205ENST00000434651 PCLOQ9Y6V0 5065 aa9.67□□□□□ -0.86
HLA-DQB1-205ENST00000434651 E9PLD3 99 aa9.67□□□□□ -0.86
HLA-DQB1-205ENST00000434651 CDK2AP2O75956 126 aa9.67□□□□□ -0.86
HLA-DQB1-205ENST00000434651 C6orf226Q5I0X4 101 aa9.67□□□□□ -0.86
HLA-DQB1-205ENST00000434651 C2orf82Q6UX34 121 aa9.67□□□□□ -0.86
HLA-DQB1-205ENST00000434651 PPDPFLQ8WWR9 84 aa9.67□□□□□ -0.86
HLA-DQB1-205ENST00000434651 PRO0461Q9UI25 63 aa9.67□□□□□ -0.86
HLA-DQB1-205ENST00000434651 VPS13BQ7Z7G8 4022 aa9.66□□□□□ -0.86
HLA-DQB1-205ENST00000434651 TINCRA0A1B0GVN0 87 aa9.65□□□□□ -0.86
HLA-DQB1-205ENST00000434651 LINC01549A6NIU2 74 aa9.65□□□□□ -0.86
HLA-DQB1-205ENST00000434651 SYCNQ0VAF6 134 aa9.65□□□□□ -0.86
HLA-DQB1-205ENST00000434651 UNQ6190/PRO20217Q6UXQ8 127 aa9.65□□□□□ -0.86
HLA-DQB1-205ENST00000434651 IFI27L1Q96BM0 104 aa9.65□□□□□ -0.86
HLA-DQB1-205ENST00000434651 HERVK_113P63121 156 aa9.64□□□□□ -0.87
HLA-DQB1-205ENST00000434651 ETDBQ3ZM63 59 aa9.64□□□□□ -0.87
HLA-DQB1-205ENST00000434651 SCXQ7RTU7 201 aa9.64□□□□□ -0.87
HLA-DQB1-205ENST00000434651 HIGD1BQ9P298 99 aa9.64□□□□□ -0.87
HLA-DQB1-205ENST00000434651 C11orf86A6NJI1 115 aa9.64□□□□□ -0.87
HLA-DQB1-205ENST00000434651 ATP5LO75964 103 aa9.64□□□□□ -0.87
HLA-DQB1-205ENST00000434651 ATOH7Q8N100 152 aa9.64□□□□□ -0.87
HLA-DQB1-205ENST00000434651 CARD19Q96LW7 228 aa9.64□□□□□ -0.87
HLA-DQB1-205ENST00000434651 CAMK2N2Q96S95 79 aa9.64□□□□□ -0.87
HLA-DQB1-205ENST00000434651 TOMM7Q9P0U1 55 aa9.64□□□□□ -0.87
HLA-DQB1-205ENST00000434651 IGLV5-45A0A087WSX0 123 aa9.63□□□□□ -0.87
HLA-DQB1-205ENST00000434651 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.63□□□□□ -0.87
HLA-DQB1-205ENST00000434651 SMIM1B2RUZ4 78 aa9.63□□□□□ -0.87
HLA-DQB1-205ENST00000434651 CIRBP-AS1Q8TBR5 109 aa9.63□□□□□ -0.87
HLA-DQB1-205ENST00000434651 CHAC1Q9BUX1 264 aa9.63□□□□□ -0.87
HLA-DQB1-205ENST00000434651 A0A096LNI7 61 aa9.62□□□□□ -0.87
HLA-DQB1-205ENST00000434651 IGKV2-24A0A0C4DH68 120 aa9.62□□□□□ -0.87
HLA-DQB1-205ENST00000434651 SNCGO76070 127 aa9.62□□□□□ -0.87
HLA-DQB1-205ENST00000434651 LEPROTL1O95214 131 aa9.62□□□□□ -0.87
HLA-DQB1-205ENST00000434651 C9orf116Q5BN46 136 aaPredicted RBP9.62□□□□□ -0.87
HLA-DQB1-205ENST00000434651 MRPL35Q9NZE8 188 aaKnown RBP9.62□□□□□ -0.87
HLA-DQB1-205ENST00000434651 ZNF22P17026 224 aaPredicted RBP9.61□□□□□ -0.87
HLA-DQB1-205ENST00000434651 LINC01545Q5VT33 79 aa9.6□□□□□ -0.87
HLA-DQB1-205ENST00000434651 C2orf48Q96LS8 159 aa9.6□□□□□ -0.87
HLA-DQB1-205ENST00000434651 C6orf48Q9UBA6 75 aa9.6□□□□□ -0.87
HLA-DQB1-205ENST00000434651 A0A1B0GWB2 263 aa9.58□□□□□ -0.88
HLA-DQB1-205ENST00000434651 LYRM7Q5U5X0 104 aa9.58□□□□□ -0.88
HLA-DQB1-205ENST00000434651 TEN1Q86WV5 123 aa9.58□□□□□ -0.88
HLA-DQB1-205ENST00000434651 LINC01561Q8N1V8 128 aa9.58□□□□□ -0.88
HLA-DQB1-205ENST00000434651 TRAV12-1A0A0B4J245 112 aa9.57□□□□□ -0.88
HLA-DQB1-205ENST00000434651 TAL2Q16559 108 aa9.57□□□□□ -0.88
HLA-DQB1-205ENST00000434651 SPACA4Q8TDM5 124 aa9.57□□□□□ -0.88
HLA-DQB1-205ENST00000434651 NDUFA1O15239 70 aa9.56□□□□□ -0.88
HLA-DQB1-205ENST00000434651 CIRBPQ14011 172 aaKnown RBP9.56□□□□□ -0.88
HLA-DQB1-205ENST00000434651 TMEM170BQ5T4T1 132 aa9.56□□□□□ -0.88
HLA-DQB1-205ENST00000434651 Q8IZM0 81 aa9.56□□□□□ -0.88
HLA-DQB1-205ENST00000434651 A0A087WYN8 130 aa9.56□□□□□ -0.88
HLA-DQB1-205ENST00000434651 COX7B2Q8TF08 81 aa9.56□□□□□ -0.88
HLA-DQB1-205ENST00000434651 DPH3Q96FX2 82 aa9.56□□□□□ -0.88
HLA-DQB1-205ENST00000434651 IMUPQ9GZP8 106 aa9.56□□□□□ -0.88
HLA-DQB1-205ENST00000434651 F8VRH5 84 aa9.55□□□□□ -0.88
HLA-DQB1-205ENST00000434651 UQCRQO14949 82 aa9.55□□□□□ -0.88
HLA-DQB1-205ENST00000434651 PRSS2P07478 247 aa9.55□□□□□ -0.88
HLA-DQB1-205ENST00000434651 Q6ZRP5 223 aa9.55□□□□□ -0.88
HLA-DQB1-205ENST00000434651 Q8N1X5 172 aa9.55□□□□□ -0.88
HLA-DQB1-205ENST00000434651 RAB37Q96AX2 223 aa9.55□□□□□ -0.88
HLA-DQB1-205ENST00000434651 NAA38Q9BRA0 125 aaKnown RBP9.55□□□□□ -0.88
HLA-DQB1-205ENST00000434651 IGLV5-39A0A0G2JS06 123 aa9.54□□□□□ -0.88
HLA-DQB1-205ENST00000434651 RPL18AQ02543 176 aaKnown RBP9.54□□□□□ -0.88
HLA-DQB1-205ENST00000434651 NMUP48645 174 aa9.53□□□□□ -0.88
HLA-DQB1-205ENST00000434651 MYCBP2O75592 4640 aa9.53□□□□□ -0.88
HLA-DQB1-205ENST00000434651 LOC107984640A0A0U1RRK4 108 aa9.53□□□□□ -0.88
HLA-DQB1-205ENST00000434651 A0A1W2PNN7 141 aa9.52□□□□□ -0.89
HLA-DQB1-205ENST00000434651 TMEM223A0PJW6 202 aa9.52□□□□□ -0.89
HLA-DQB1-205ENST00000434651 FAM168BA1KXE4 195 aa9.52□□□□□ -0.89
HLA-DQB1-205ENST00000434651 C3orf22Q8N5N4 141 aa9.52□□□□□ -0.89
HLA-DQB1-205ENST00000434651 LINC01600Q96MT4 127 aa9.52□□□□□ -0.89
HLA-DQB1-205ENST00000434651 Q5VSD8 79 aa9.51□□□□□ -0.89
HLA-DQB1-205ENST00000434651 LINC00528Q8N1L1 170 aa9.51□□□□□ -0.89
HLA-DQB1-205ENST00000434651 TMEM258P61165 79 aa9.5□□□□□ -0.89
HLA-DQB1-205ENST00000434651 ZNF625Q96I27 306 aaPredicted RBP9.5□□□□□ -0.89
HLA-DQB1-205ENST00000434651 FLG2Q5D862 2391 aaPredicted RBP9.49□□□□□ -0.89
HLA-DQB1-205ENST00000434651 TRBV20-1A0A075B6N2 111 aa9.49□□□□□ -0.89
HLA-DQB1-205ENST00000434651 TRBV7-7A0A0K0K1E9 115 aa9.49□□□□□ -0.89
HLA-DQB1-205ENST00000434651 KRTAP7-1Q8IUC3 87 aa9.49□□□□□ -0.89
HLA-DQB1-205ENST00000434651 PLAC8Q9NZF1 115 aa9.49□□□□□ -0.89
HLA-DQB1-205ENST00000434651 TRBV30A0A0K0K1B3 111 aa9.49□□□□□ -0.89
HLA-DQB1-205ENST00000434651 TSPEAR-AS2P59090 65 aa9.49□□□□□ -0.89
HLA-DQB1-205ENST00000434651 CRYGAP11844 174 aa9.48□□□□□ -0.89
HLA-DQB1-205ENST00000434651 C9orf129Q5T035 196 aaKnown RBP9.48□□□□□ -0.89
HLA-DQB1-205ENST00000434651 C9orf153Q5TBE3 101 aa9.48□□□□□ -0.89
HLA-DQB1-205ENST00000434651 XAGE1AQ9HD64 81 aa9.48□□□□□ -0.89
HLA-DQB1-205ENST00000434651 EPM2AB3EWF7 344 aa9.47□□□□□ -0.89
HLA-DQB1-205ENST00000434651 NDUFC2-KCTD14E9PQ53 114 aa9.47□□□□□ -0.89
HLA-DQB1-205ENST00000434651 TLX1NBP0CAT3 122 aa9.47□□□□□ -0.89
HLA-DQB1-205ENST00000434651 KRTAP10-4P60372 401 aaPredicted RBP9.47□□□□□ -0.89
HLA-DQB1-205ENST00000434651 PLEKHB2Q96CS7 222 aa9.47□□□□□ -0.89
HLA-DQB1-205ENST00000434651 A0A0U1RRA0 63 aa9.46□□□□□ -0.89
HLA-DQB1-205ENST00000434651 DPM2O94777 84 aa9.46□□□□□ -0.89
HLA-DQB1-205ENST00000434651 IGKCP01834 107 aa9.45□□□□□ -0.9
HLA-DQB1-205ENST00000434651 LRP1Q07954 4544 aaKnown RBP9.45□□□□□ -0.9
HLA-DQB1-205ENST00000434651 FAM240AA0A1B0GVK7 77 aa9.45□□□□□ -0.9
HLA-DQB1-205ENST00000434651 PFN2P35080 140 aa9.45□□□□□ -0.9
HLA-DQB1-205ENST00000434651 PLNP26678 52 aa9.44□□□□□ -0.9
HLA-DQB1-205ENST00000434651 CXCL5P42830 114 aa9.44□□□□□ -0.9
HLA-DQB1-205ENST00000434651 KRTAP11-1Q8IUC1 163 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms