RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 NANOS2P60321 138 aaKnown RBP10.71□□□□□ -0.7
SCARF1-203ENST00000434376 C22orf24Q9Y442 160 aa10.71□□□□□ -0.7
SCARF1-203ENST00000434376 IGKV2-28A0A075B6P5 120 aa10.7□□□□□ -0.7
SCARF1-203ENST00000434376 ATOX1O00244 68 aa10.7□□□□□ -0.7
SCARF1-203ENST00000434376 IGKV2D-28P01615 120 aa10.7□□□□□ -0.7
SCARF1-203ENST00000434376 J3KT08 172 aa10.7□□□□□ -0.7
SCARF1-203ENST00000434376 UNQ6190/PRO20217Q6UXQ8 127 aa10.7□□□□□ -0.7
SCARF1-203ENST00000434376 C10orf25Q5T742 122 aa10.69□□□□□ -0.7
SCARF1-203ENST00000434376 KRTAP10-11P60412 298 aa10.69□□□□□ -0.7
SCARF1-203ENST00000434376 TRAV23DV6A0A075B6W5 121 aa10.69□□□□□ -0.7
SCARF1-203ENST00000434376 CXCL5P42830 114 aa10.69□□□□□ -0.7
SCARF1-203ENST00000434376 WFDC10BQ8IUB3 73 aa10.69□□□□□ -0.7
SCARF1-203ENST00000434376 CYSRT1A8MQ03 144 aa10.68□□□□□ -0.7
SCARF1-203ENST00000434376 Q8NAQ8 132 aa10.68□□□□□ -0.7
SCARF1-203ENST00000434376 A0A087WZ39 114 aa10.68□□□□□ -0.7
SCARF1-203ENST00000434376 RPL28P46779 137 aaKnown RBP10.67□□□□□ -0.7
SCARF1-203ENST00000434376 RPL18AQ02543 176 aaKnown RBP10.67□□□□□ -0.7
SCARF1-203ENST00000434376 USP17L23D6RBM5 183 aa10.66□□□□□ -0.7
SCARF1-203ENST00000434376 A0A0J9YWU9 116 aa10.66□□□□□ -0.7
SCARF1-203ENST00000434376 LYRM9A8MSI8 78 aa10.66□□□□□ -0.7
SCARF1-203ENST00000434376 SPAG11BQ08648 103 aa10.65□□□□□ -0.7
SCARF1-203ENST00000434376 ANK2Q01484 3957 aa10.65□□□□□ -0.71
SCARF1-203ENST00000434376 KPRPQ5T749 579 aaPredicted RBP10.64□□□□□ -0.71
SCARF1-203ENST00000434376 ORMDL1Q9P0S3 153 aa10.63□□□□□ -0.71
SCARF1-203ENST00000434376 SMIM9A6NGZ8 99 aa10.63□□□□□ -0.71
SCARF1-203ENST00000434376 S100A7L2Q5SY68 101 aa10.63□□□□□ -0.71
SCARF1-203ENST00000434376 ENHOQ6UWT2 76 aa10.62□□□□□ -0.71
SCARF1-203ENST00000434376 C2orf48Q96LS8 159 aa10.62□□□□□ -0.71
SCARF1-203ENST00000434376 IGKV2D-24A0A075B6R9 120 aa10.61□□□□□ -0.71
SCARF1-203ENST00000434376 H0YGX0 51 aa10.61□□□□□ -0.71
SCARF1-203ENST00000434376 FAM19A1Q7Z5A9 133 aa10.61□□□□□ -0.71
SCARF1-203ENST00000434376 MIFP14174 115 aa10.61□□□□□ -0.71
SCARF1-203ENST00000434376 SERP2Q8N6R1 65 aa10.6□□□□□ -0.71
SCARF1-203ENST00000434376 GHRHP01286 108 aa10.6□□□□□ -0.71
SCARF1-203ENST00000434376 LINC01561Q8N1V8 128 aa10.6□□□□□ -0.71
SCARF1-203ENST00000434376 C20orf197Q8N268 126 aa10.59□□□□□ -0.71
SCARF1-203ENST00000434376 CD164L2Q6UWJ8 174 aa10.59□□□□□ -0.71
SCARF1-203ENST00000434376 IBA57-AS1B1ANH7 110 aa10.58□□□□□ -0.72
SCARF1-203ENST00000434376 CRYGAP11844 174 aa10.58□□□□□ -0.72
SCARF1-203ENST00000434376 HAMPP81172 84 aa10.57□□□□□ -0.72
SCARF1-203ENST00000434376 LYPD5Q6UWN5 251 aa10.57□□□□□ -0.72
SCARF1-203ENST00000434376 Q8NDZ9 215 aa10.57□□□□□ -0.72
SCARF1-203ENST00000434376 LAMTOR3Q9UHA4 124 aa10.57□□□□□ -0.72
SCARF1-203ENST00000434376 DEFB131BA0A096LNP1 70 aa10.56□□□□□ -0.72
SCARF1-203ENST00000434376 C6orf99Q4VX62 202 aa10.56□□□□□ -0.72
SCARF1-203ENST00000434376 Q6JHZ5 121 aa10.56□□□□□ -0.72
SCARF1-203ENST00000434376 HRCT1Q6UXD1 115 aa10.56□□□□□ -0.72
SCARF1-203ENST00000434376 ZNF561-AS1K7EIQ3 104 aa10.56□□□□□ -0.72
SCARF1-203ENST00000434376 LINC00612Q8N6U2 182 aa10.55□□□□□ -0.72
SCARF1-203ENST00000434376 A0A1B0GUV1 79 aa10.55□□□□□ -0.72
SCARF1-203ENST00000434376 C4orf26Q17RF5 130 aa10.55□□□□□ -0.72
SCARF1-203ENST00000434376 C5orf47Q569G3 176 aa10.55□□□□□ -0.72
SCARF1-203ENST00000434376 C11orf45Q8TAV5 145 aa10.54□□□□□ -0.72
SCARF1-203ENST00000434376 DPH3Q96FX2 82 aa10.54□□□□□ -0.72
SCARF1-203ENST00000434376 CAMK2N2Q96S95 79 aa10.54□□□□□ -0.72
SCARF1-203ENST00000434376 ESRGQ1W209 222 aa10.53□□□□□ -0.72
SCARF1-203ENST00000434376 LELP1Q5T871 98 aa10.53□□□□□ -0.72
SCARF1-203ENST00000434376 Q8IZM0 81 aa10.53□□□□□ -0.72
SCARF1-203ENST00000434376 UBL5Q9BZL1 73 aa10.52□□□□□ -0.73
SCARF1-203ENST00000434376 KIAA0087Q14695 138 aa10.52□□□□□ -0.73
SCARF1-203ENST00000434376 SCXQ7RTU7 201 aa10.51□□□□□ -0.73
SCARF1-203ENST00000434376 CCKP06307 115 aa10.51□□□□□ -0.73
SCARF1-203ENST00000434376 UPK3BQ9BT76 320 aa10.51□□□□□ -0.73
SCARF1-203ENST00000434376 TMEM258P61165 79 aa10.5□□□□□ -0.73
SCARF1-203ENST00000434376 FAM19A3Q7Z5A8 133 aa10.5□□□□□ -0.73
SCARF1-203ENST00000434376 SNURFQ9Y675 71 aa10.49□□□□□ -0.73
SCARF1-203ENST00000434376 OXTP01178 125 aa10.48□□□□□ -0.73
SCARF1-203ENST00000434376 Q8N814 137 aa10.48□□□□□ -0.73
SCARF1-203ENST00000434376 C1orf43Q9BWL3 253 aa10.48□□□□□ -0.73
SCARF1-203ENST00000434376 TMEM256-PLSCR3K7ERE1 68 aa10.46□□□□□ -0.74
SCARF1-203ENST00000434376 JMJD7-PLA2G4BH0Y9G9 81 aa10.45□□□□□ -0.74
SCARF1-203ENST00000434376 C6orf48Q9UBA6 75 aa10.45□□□□□ -0.74
SCARF1-203ENST00000434376 Q6ZRU5 148 aa10.45□□□□□ -0.74
SCARF1-203ENST00000434376 COL7A1Q02388 2944 aa10.44□□□□□ -0.74
SCARF1-203ENST00000434376 TRBV10-3A0A0K0K1G6 114 aa10.44□□□□□ -0.74
SCARF1-203ENST00000434376 SRRM2Q9UQ35 2752 aaKnown RBP10.44□□□□□ -0.74
SCARF1-203ENST00000434376 TGP01266 2768 aa10.44□□□□□ -0.74
SCARF1-203ENST00000434376 M0R2N4 97 aa10.43□□□□□ -0.74
SCARF1-203ENST00000434376 DEFB105AQ8NG35 78 aa10.43□□□□□ -0.74
SCARF1-203ENST00000434376 RBM3P98179 157 aaKnown RBP10.43□□□□□ -0.74
SCARF1-203ENST00000434376 CASC10Q5T4H9 136 aa10.43□□□□□ -0.74
SCARF1-203ENST00000434376 OBSCN-AS1Q96MR7 158 aa10.41□□□□□ -0.74
SCARF1-203ENST00000434376 RPL37AP8A6NKH3 93 aa10.4□□□□□ -0.74
SCARF1-203ENST00000434376 Q6ZQY7 126 aa10.4□□□□□ -0.74
SCARF1-203ENST00000434376 RPS28P62857 69 aaKnown RBP10.39□□□□□ -0.75
SCARF1-203ENST00000434376 FAM236DA0A1B0GTK5 79 aa10.39□□□□□ -0.75
SCARF1-203ENST00000434376 FAM236CP0DP71 79 aa10.39□□□□□ -0.75
SCARF1-203ENST00000434376 RMI2Q96E14 147 aa10.38□□□□□ -0.75
SCARF1-203ENST00000434376 TRAV10A0A0B4J240 114 aa10.37□□□□□ -0.75
SCARF1-203ENST00000434376 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.36□□□□□ -0.75
SCARF1-203ENST00000434376 IGKV2-24A0A0C4DH68 120 aa10.36□□□□□ -0.75
SCARF1-203ENST00000434376 LINC01547P58512 204 aaPredicted RBP10.34□□□□□ -0.75
SCARF1-203ENST00000434376 PRR34Q9NV39 138 aa10.34□□□□□ -0.75
SCARF1-203ENST00000434376 FAM168BA1KXE4 195 aa10.33□□□□□ -0.76
SCARF1-203ENST00000434376 F8WEM9 126 aa10.33□□□□□ -0.76
SCARF1-203ENST00000434376 NDUFC2O95298 119 aa10.33□□□□□ -0.76
SCARF1-203ENST00000434376 K7EIL1 84 aa10.33□□□□□ -0.76
SCARF1-203ENST00000434376 Q6ZVQ6 151 aa10.33□□□□□ -0.76
SCARF1-203ENST00000434376 Q8N9L7 120 aa10.33□□□□□ -0.76
SCARF1-203ENST00000434376 LYSTQ99698 3801 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms